RNA–Protein interactions for RNA: ENST00000476112.1

DCLRE1A-203, Transcript of DNA cross-link repair 1A, humanhuman

TSL 3

Gene DCLRE1A, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1A-203ENST00000476112 TRIM52Q96A61 297 aa11.64□□□□□ -0.55
DCLRE1A-203ENST00000476112 STAC3Q96MF2 364 aa11.64□□□□□ -0.55
DCLRE1A-203ENST00000476112 ATF3P18847 181 aa11.63□□□□□ -0.55
DCLRE1A-203ENST00000476112 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.63□□□□□ -0.55
DCLRE1A-203ENST00000476112 RNF166Q96A37 237 aaPredicted RBP11.63□□□□□ -0.55
DCLRE1A-203ENST00000476112 NUTM2BA6NNL0 878 aaPredicted RBP11.62□□□□□ -0.55
DCLRE1A-203ENST00000476112 NUTM2EB1AL46 878 aaPredicted RBP11.62□□□□□ -0.55
DCLRE1A-203ENST00000476112 NBR1Q14596 966 aa11.62□□□□□ -0.55
DCLRE1A-203ENST00000476112 NUTM2AQ8IVF1 878 aaPredicted RBP11.62□□□□□ -0.55
DCLRE1A-203ENST00000476112 C19orf44Q9H6X5 657 aa11.62□□□□□ -0.55
DCLRE1A-203ENST00000476112 SPATA31A6Q5VVP1 1343 aa11.61□□□□□ -0.55
DCLRE1A-203ENST00000476112 PTPRUQ92729 1446 aa11.61□□□□□ -0.55
DCLRE1A-203ENST00000476112 AHDC1Q5TGY3 1603 aaPredicted RBP11.61□□□□□ -0.55
DCLRE1A-203ENST00000476112 IQGAP3Q86VI3 1631 aa11.61□□□□□ -0.55
DCLRE1A-203ENST00000476112 ITGAEP38570 1179 aa11.61□□□□□ -0.55
DCLRE1A-203ENST00000476112 AMOTL2Q9Y2J4 779 aa11.61□□□□□ -0.55
DCLRE1A-203ENST00000476112 DIP2AQ14689 1571 aa11.61□□□□□ -0.55
DCLRE1A-203ENST00000476112 SHPRHQ149N8 1683 aa11.61□□□□□ -0.55
DCLRE1A-203ENST00000476112 TRPM2O94759 1503 aa11.6□□□□□ -0.55
DCLRE1A-203ENST00000476112 BRINP3Q76B58 766 aa11.6□□□□□ -0.55
DCLRE1A-203ENST00000476112 NCOA3Q9Y6Q9 1424 aa11.6□□□□□ -0.55
DCLRE1A-203ENST00000476112 NUP155O75694 1391 aa11.59□□□□□ -0.55
DCLRE1A-203ENST00000476112 GRXCR2A6NFK2 248 aa11.59□□□□□ -0.55
DCLRE1A-203ENST00000476112 ZNF772Q68DY9 489 aaPredicted RBP11.59□□□□□ -0.55
DCLRE1A-203ENST00000476112 KCNV2Q8TDN2 545 aa11.59□□□□□ -0.55
DCLRE1A-203ENST00000476112 ARHGEF1Q92888 912 aaKnown RBP11.59□□□□□ -0.55
DCLRE1A-203ENST00000476112 NRXN3Q9Y4C0 1643 aa11.58□□□□□ -0.56
DCLRE1A-203ENST00000476112 PPARGC1BQ86YN6 1023 aaKnown RBP11.58□□□□□ -0.56
DCLRE1A-203ENST00000476112 DDX17Q92841 729 aaKnown RBP11.58□□□□□ -0.56
DCLRE1A-203ENST00000476112 PIK3R4Q99570 1358 aa11.57□□□□□ -0.56
DCLRE1A-203ENST00000476112 ASXL1Q8IXJ9 1541 aa11.57□□□□□ -0.56
DCLRE1A-203ENST00000476112 PPP1R3GB7ZBB8 358 aa11.57□□□□□ -0.56
DCLRE1A-203ENST00000476112 XRN1Q8IZH2 1706 aaKnown RBP11.57□□□□□ -0.56
DCLRE1A-203ENST00000476112 MAP3K7O43318 606 aa11.56□□□□□ -0.56
DCLRE1A-203ENST00000476112 RXRBP28702 533 aa11.56□□□□□ -0.56
DCLRE1A-203ENST00000476112 ZNF326Q5BKZ1 582 aaKnown RBP11.56□□□□□ -0.56
DCLRE1A-203ENST00000476112 C6orf132Q5T0Z8 1188 aa11.56□□□□□ -0.56
DCLRE1A-203ENST00000476112 SLC4A5Q9BY07 1137 aa11.56□□□□□ -0.56
DCLRE1A-203ENST00000476112 VPS9D1Q9Y2B5 631 aa11.56□□□□□ -0.56
DCLRE1A-203ENST00000476112 AFF2P51816 1311 aa11.56□□□□□ -0.56
DCLRE1A-203ENST00000476112 METP08581 1390 aa11.55□□□□□ -0.56
DCLRE1A-203ENST00000476112 ROCK1Q13464 1354 aa11.55□□□□□ -0.56
DCLRE1A-203ENST00000476112 SPHKAPQ2M3C7 1700 aa11.55□□□□□ -0.56
DCLRE1A-203ENST00000476112 ZBED2Q9BTP6 218 aa11.55□□□□□ -0.56
DCLRE1A-203ENST00000476112 MST1RQ04912 1400 aa11.54□□□□□ -0.56
DCLRE1A-203ENST00000476112 NHSL1Q5SYE7 1610 aa11.54□□□□□ -0.56
DCLRE1A-203ENST00000476112 EN1Q05925 392 aaPredicted RBP11.54□□□□□ -0.56
DCLRE1A-203ENST00000476112 SETBP1Q9Y6X0 1596 aa11.54□□□□□ -0.56
DCLRE1A-203ENST00000476112 DCCP43146 1447 aa11.53□□□□□ -0.56
DCLRE1A-203ENST00000476112 NALCNQ8IZF0 1738 aa11.53□□□□□ -0.56
DCLRE1A-203ENST00000476112 HRO43593 1189 aa11.53□□□□□ -0.56
DCLRE1A-203ENST00000476112 C8orf37Q96NL8 207 aa11.53□□□□□ -0.56
DCLRE1A-203ENST00000476112 KDM2AQ9Y2K7 1162 aa11.53□□□□□ -0.56
DCLRE1A-203ENST00000476112 SETD5Q9C0A6 1442 aa11.52□□□□□ -0.57
DCLRE1A-203ENST00000476112 CLTCL1P53675 1640 aa11.51□□□□□ -0.57
DCLRE1A-203ENST00000476112 COL9A1P20849 921 aa11.51□□□□□ -0.57
DCLRE1A-203ENST00000476112 ADGRL3Q9HAR2 1447 aa11.51□□□□□ -0.57
DCLRE1A-203ENST00000476112 ADAMTS2O95450 1211 aa11.5□□□□□ -0.57
DCLRE1A-203ENST00000476112 LRRC59Q96AG4 307 aaKnown RBP11.5□□□□□ -0.57
DCLRE1A-203ENST00000476112 NBPF3Q9H094 633 aa11.5□□□□□ -0.57
DCLRE1A-203ENST00000476112 QTRT2Q9H974 415 aaKnown RBP11.5□□□□□ -0.57
DCLRE1A-203ENST00000476112 PNPLA6Q8IY17 1366 aa11.5□□□□□ -0.57
DCLRE1A-203ENST00000476112 RGS12O14924 1447 aa11.5□□□□□ -0.57
DCLRE1A-203ENST00000476112 NEXMIFQ5QGS0 1516 aa11.5□□□□□ -0.57
DCLRE1A-203ENST00000476112 CDK12Q9NYV4 1490 aaPredicted RBP11.49□□□□□ -0.57
DCLRE1A-203ENST00000476112 GOLGA8CPA6NN73 597 aa11.48□□□□□ -0.57
DCLRE1A-203ENST00000476112 TSR1Q2NL82 804 aaKnown RBP11.48□□□□□ -0.57
DCLRE1A-203ENST00000476112 PROX2Q3B8N5 592 aa11.48□□□□□ -0.57
DCLRE1A-203ENST00000476112 MRPL50Q8N5N7 158 aaKnown RBP11.48□□□□□ -0.57
DCLRE1A-203ENST00000476112 SRCAPQ6ZRS2 3230 aa11.48□□□□□ -0.57
DCLRE1A-203ENST00000476112 KIF1BO60333 1816 aa11.47□□□□□ -0.57
DCLRE1A-203ENST00000476112 NGLY1Q96IV0 654 aa11.47□□□□□ -0.57
DCLRE1A-203ENST00000476112 ORAI2Q96SN7 254 aa11.47□□□□□ -0.57
DCLRE1A-203ENST00000476112 C1orf167Q5SNV9 1468 aa11.46□□□□□ -0.57
DCLRE1A-203ENST00000476112 ROBO2Q9HCK4 1378 aa11.45□□□□□ -0.58
DCLRE1A-203ENST00000476112 OSBPP22059 807 aa11.45□□□□□ -0.58
DCLRE1A-203ENST00000476112 RBM6P78332 1123 aaKnown RBP11.45□□□□□ -0.58
DCLRE1A-203ENST00000476112 KCTD12Q96CX2 325 aaKnown RBP11.45□□□□□ -0.58
DCLRE1A-203ENST00000476112 RABGEF1Q9UJ41 708 aa11.45□□□□□ -0.58
DCLRE1A-203ENST00000476112 BHMG1C9JSJ3 638 aaPredicted RBP11.44□□□□□ -0.58
DCLRE1A-203ENST00000476112 ONECUT3O60422 494 aaPredicted RBP11.43□□□□□ -0.58
DCLRE1A-203ENST00000476112 MLLT3P42568 568 aaPredicted RBP11.43□□□□□ -0.58
DCLRE1A-203ENST00000476112 TRIM6-TRIM34B2RNG4 842 aa11.42□□□□□ -0.58
DCLRE1A-203ENST00000476112 XPCQ01831 940 aaPredicted RBP11.42□□□□□ -0.58
DCLRE1A-203ENST00000476112 KIAA1468Q9P260 1216 aa11.42□□□□□ -0.58
DCLRE1A-203ENST00000476112 USP21Q9UK80 565 aa11.42□□□□□ -0.58
DCLRE1A-203ENST00000476112 PTCH1Q13635 1447 aa11.42□□□□□ -0.58
DCLRE1A-203ENST00000476112 LAMC1P11047 1609 aa11.42□□□□□ -0.58
DCLRE1A-203ENST00000476112 SOS2Q07890 1332 aaPredicted RBP11.41□□□□□ -0.58
DCLRE1A-203ENST00000476112 PRIM1P49642 420 aaKnown RBP11.41□□□□□ -0.58
DCLRE1A-203ENST00000476112 NAIPQ13075 1403 aa11.41□□□□□ -0.58
DCLRE1A-203ENST00000476112 HCSTQ9UBK5 93 aa11.4□□□□□ -0.58
DCLRE1A-203ENST00000476112 PPLO60437 1756 aa11.4□□□□□ -0.58
DCLRE1A-203ENST00000476112 EP400Q96L91 3159 aa11.4□□□□□ -0.59
DCLRE1A-203ENST00000476112 NUTM2FA1L443 756 aa11.39□□□□□ -0.59
DCLRE1A-203ENST00000476112 SEMA3EO15041 775 aa11.39□□□□□ -0.59
DCLRE1A-203ENST00000476112 ESCO1Q5FWF5 840 aa11.39□□□□□ -0.59
DCLRE1A-203ENST00000476112 PACS2Q86VP3 889 aa11.39□□□□□ -0.59
DCLRE1A-203ENST00000476112 WNT2BQ93097 391 aa11.39□□□□□ -0.59
DCLRE1A-203ENST00000476112 ATAD2Q6PL18 1390 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms