RNA–Protein interactions for RNA: ENST00000475035.5

SNRPE-205, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

TSL 1 (best)

Gene SNRPE, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-205ENST00000475035 NINLQ9Y2I6 1382 aa12.18□□□□□ -0.46
SNRPE-205ENST00000475035 KCNH5Q8NCM2 988 aa12.18□□□□□ -0.46
SNRPE-205ENST00000475035 USP47Q96K76 1375 aa12.18□□□□□ -0.46
SNRPE-205ENST00000475035 CD163L1Q9NR16 1453 aa12.17□□□□□ -0.46
SNRPE-205ENST00000475035 ST20-MTHFSA0A0A6YYL1 179 aa12.17□□□□□ -0.46
SNRPE-205ENST00000475035 SOX12O15370 315 aa12.17□□□□□ -0.46
SNRPE-205ENST00000475035 LARP1Q6PKG0 1096 aaKnown RBP12.17□□□□□ -0.46
SNRPE-205ENST00000475035 TCP11L2Q8N4U5 519 aa12.17□□□□□ -0.46
SNRPE-205ENST00000475035 PUS7Q96PZ0 661 aaKnown RBP12.17□□□□□ -0.46
SNRPE-205ENST00000475035 TERF2IPQ9NYB0 399 aa12.17□□□□□ -0.46
SNRPE-205ENST00000475035 EDC4Q6P2E9 1401 aaKnown RBP12.17□□□□□ -0.46
SNRPE-205ENST00000475035 COL18A1P39060 1754 aa12.17□□□□□ -0.46
SNRPE-205ENST00000475035 NFAT5O94916 1531 aa12.16□□□□□ -0.46
SNRPE-205ENST00000475035 ABCC6O95255 1503 aa12.16□□□□□ -0.46
SNRPE-205ENST00000475035 BARGINQ6ZT62 677 aa12.16□□□□□ -0.46
SNRPE-205ENST00000475035 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.16□□□□□ -0.46
SNRPE-205ENST00000475035 ZRANB1Q9UGI0 708 aa12.16□□□□□ -0.46
SNRPE-205ENST00000475035 TIMELESSQ9UNS1 1208 aa12.16□□□□□ -0.46
SNRPE-205ENST00000475035 THRAP3Q9Y2W1 955 aaKnown RBP12.16□□□□□ -0.46
SNRPE-205ENST00000475035 CRB1P82279 1406 aa12.16□□□□□ -0.46
SNRPE-205ENST00000475035 PARP4Q9UKK3 1724 aaKnown RBP12.16□□□□□ -0.46
SNRPE-205ENST00000475035 A0A1W2PP64 1363 aa12.16□□□□□ -0.46
SNRPE-205ENST00000475035 WNK3Q9BYP7 1800 aa12.16□□□□□ -0.46
SNRPE-205ENST00000475035 LTN1O94822 1766 aa12.15□□□□□ -0.46
SNRPE-205ENST00000475035 RGPD5Q99666 1765 aa12.15□□□□□ -0.46
SNRPE-205ENST00000475035 TESK2Q96S53 571 aa12.15□□□□□ -0.46
SNRPE-205ENST00000475035 TNS1Q9HBL0 1735 aaKnown RBP12.14□□□□□ -0.47
SNRPE-205ENST00000475035 BAG6P46379 1132 aa12.14□□□□□ -0.47
SNRPE-205ENST00000475035 PDE3BQ13370 1112 aa12.14□□□□□ -0.47
SNRPE-205ENST00000475035 SLC12A5Q9H2X9 1139 aa12.14□□□□□ -0.47
SNRPE-205ENST00000475035 USP31Q70CQ4 1352 aa12.14□□□□□ -0.47
SNRPE-205ENST00000475035 TMF1P82094 1093 aa12.13□□□□□ -0.47
SNRPE-205ENST00000475035 FAM182BQ5T319 152 aa12.13□□□□□ -0.47
SNRPE-205ENST00000475035 TOM1L2Q6ZVM7 507 aa12.13□□□□□ -0.47
SNRPE-205ENST00000475035 DEFB132Q7Z7B7 95 aa12.13□□□□□ -0.47
SNRPE-205ENST00000475035 ARHGEF25Q86VW2 580 aa12.13□□□□□ -0.47
SNRPE-205ENST00000475035 NME9Q86XW9 330 aa12.13□□□□□ -0.47
SNRPE-205ENST00000475035 WDR17Q8IZU2 1322 aa12.12□□□□□ -0.47
SNRPE-205ENST00000475035 LRRC37A3O60309 1634 aa12.12□□□□□ -0.47
SNRPE-205ENST00000475035 CSB-PGBD3P0DP91 1061 aa12.12□□□□□ -0.47
SNRPE-205ENST00000475035 FAM196AQ6ZSG2 479 aa12.12□□□□□ -0.47
SNRPE-205ENST00000475035 CDCA8Q53HL2 280 aa12.11□□□□□ -0.47
SNRPE-205ENST00000475035 AXIN2Q9Y2T1 843 aa12.11□□□□□ -0.47
SNRPE-205ENST00000475035 OVOS2A0A0J9YW53 1432 aa12.11□□□□□ -0.47
SNRPE-205ENST00000475035 DISP2A7MBM2 1401 aa12.11□□□□□ -0.47
SNRPE-205ENST00000475035 OVOS2Q6IE36 1432 aa12.11□□□□□ -0.47
SNRPE-205ENST00000475035 ANKRD36BQ8N2N9 1353 aa12.1□□□□□ -0.47
SNRPE-205ENST00000475035 CCER1Q8TC90 406 aaPredicted RBP12.1□□□□□ -0.47
SNRPE-205ENST00000475035 C11orf95C9JLR9 678 aaPredicted RBP12.09□□□□□ -0.47
SNRPE-205ENST00000475035 CDCA7Q9BWT1 371 aaPredicted RBP12.09□□□□□ -0.47
SNRPE-205ENST00000475035 OVOS2A0A0G2JMS6 1433 aa12.09□□□□□ -0.47
SNRPE-205ENST00000475035 CCDC7Q96M83 1385 aa12.08□□□□□ -0.48
SNRPE-205ENST00000475035 TRIM37O94972 964 aa12.08□□□□□ -0.48
SNRPE-205ENST00000475035 DDB1Q16531 1140 aa12.08□□□□□ -0.48
SNRPE-205ENST00000475035 COG3Q96JB2 828 aa12.08□□□□□ -0.48
SNRPE-205ENST00000475035 CARD10Q9BWT7 1032 aa12.08□□□□□ -0.48
SNRPE-205ENST00000475035 KIF20BQ96Q89 1820 aa12.08□□□□□ -0.48
SNRPE-205ENST00000475035 MYOM1P52179 1685 aa12.07□□□□□ -0.48
SNRPE-205ENST00000475035 FAM208AQ9UK61 1670 aaKnown RBP12.07□□□□□ -0.48
SNRPE-205ENST00000475035 ATXN8OSP0DMR3 200 aa12.07□□□□□ -0.48
SNRPE-205ENST00000475035 EN1Q05925 392 aaPredicted RBP12.07□□□□□ -0.48
SNRPE-205ENST00000475035 PEAK1Q9H792 1746 aa12.07□□□□□ -0.48
SNRPE-205ENST00000475035 ERBB3P21860 1342 aa12.07□□□□□ -0.48
SNRPE-205ENST00000475035 SBF2Q86WG5 1849 aa12.07□□□□□ -0.48
SNRPE-205ENST00000475035 PARD3Q8TEW0 1356 aa12.06□□□□□ -0.48
SNRPE-205ENST00000475035 CAPN15O75808 1086 aa12.06□□□□□ -0.48
SNRPE-205ENST00000475035 ZNF219Q9P2Y4 722 aaPredicted RBP12.06□□□□□ -0.48
SNRPE-205ENST00000475035 APBA3O96018 575 aa12.05□□□□□ -0.48
SNRPE-205ENST00000475035 NLRP2Q9NX02 1062 aa12.05□□□□□ -0.48
SNRPE-205ENST00000475035 RREB1Q92766 1687 aa12.05□□□□□ -0.48
SNRPE-205ENST00000475035 TNS2Q63HR2 1409 aa12.04□□□□□ -0.48
SNRPE-205ENST00000475035 ANKRD24Q8TF21 1146 aa12.04□□□□□ -0.48
SNRPE-205ENST00000475035 SPINK5Q9NQ38 1064 aaPredicted RBP12.04□□□□□ -0.48
SNRPE-205ENST00000475035 RGPD3A6NKT7 1758 aaPredicted RBP12.04□□□□□ -0.48
SNRPE-205ENST00000475035 RGPD4Q7Z3J3 1758 aa12.04□□□□□ -0.48
SNRPE-205ENST00000475035 KAT6BQ8WYB5 2073 aa12.03□□□□□ -0.48
SNRPE-205ENST00000475035 RTL1A6NKG5 1358 aa12.03□□□□□ -0.48
SNRPE-205ENST00000475035 NUP188Q5SRE5 1749 aa12.03□□□□□ -0.48
SNRPE-205ENST00000475035 EXOC5O00471 708 aa12.02□□□□□ -0.49
SNRPE-205ENST00000475035 EZH2Q15910 746 aaKnown RBP12.02□□□□□ -0.49
SNRPE-205ENST00000475035 IP6K1Q92551 441 aa12.02□□□□□ -0.49
SNRPE-205ENST00000475035 LRP5O75197 1615 aa12.01□□□□□ -0.49
SNRPE-205ENST00000475035 PSDA5PKW4 1024 aaPredicted RBP12.01□□□□□ -0.49
SNRPE-205ENST00000475035 AMPHP49418 695 aa12.01□□□□□ -0.49
SNRPE-205ENST00000475035 EIF4G2P78344 907 aaKnown RBP eCLIP12.01□□□□□ -0.49
SNRPE-205ENST00000475035 CAMKK2Q96RR4 588 aa12.01□□□□□ -0.49
SNRPE-205ENST00000475035 MAP3K19Q56UN5 1328 aa12.01□□□□□ -0.49
SNRPE-205ENST00000475035 BCL9O00512 1426 aa12.01□□□□□ -0.49
SNRPE-205ENST00000475035 NSD3Q9BZ95 1437 aa12.01□□□□□ -0.49
SNRPE-205ENST00000475035 IL2RBP14784 551 aa12□□□□□ -0.49
SNRPE-205ENST00000475035 MARCH10Q8NA82 808 aaPredicted RBP12□□□□□ -0.49
SNRPE-205ENST00000475035 LTV1Q96GA3 475 aaPredicted RBP12□□□□□ -0.49
SNRPE-205ENST00000475035 GGNBP2Q9H3C7 697 aa12□□□□□ -0.49
SNRPE-205ENST00000475035 SMG6Q86US8 1419 aaKnown RBP12□□□□□ -0.49
SNRPE-205ENST00000475035 FYB1O15117 783 aa11.99□□□□□ -0.49
SNRPE-205ENST00000475035 HOXC9P31274 260 aa11.99□□□□□ -0.49
SNRPE-205ENST00000475035 POLR3GLQ9BT43 218 aa11.99□□□□□ -0.49
SNRPE-205ENST00000475035 NHSQ6T4R5 1651 aa11.99□□□□□ -0.49
SNRPE-205ENST00000475035 RGPD2P0DJD1 1756 aa11.99□□□□□ -0.49
SNRPE-205ENST00000475035 R3HDM1Q15032 1099 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms