RNA–Protein interactions for RNA: ENST00000474986.2

YIF1A-206, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 1 (best)

Gene YIF1A, Length 860 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-206ENST00000474986 COL5A2P05997 1499 aaPredicted RBP31.25■■■□□ 2.59
YIF1A-206ENST00000474986 CDK12Q9NYV4 1490 aaPredicted RBP31.25■■■□□ 2.59
YIF1A-206ENST00000474986 EVA1CP58658 441 aa31.24■■■□□ 2.59
YIF1A-206ENST00000474986 AXIN2Q9Y2T1 843 aa31.24■■■□□ 2.59
YIF1A-206ENST00000474986 MAP3K19Q56UN5 1328 aa31.24■■■□□ 2.59
YIF1A-206ENST00000474986 NPC1L1Q9UHC9 1359 aa31.23■■■□□ 2.59
YIF1A-206ENST00000474986 STRN4Q9NRL3 753 aa31.23■■■□□ 2.59
YIF1A-206ENST00000474986 RTL1A6NKG5 1358 aa31.21■■■□□ 2.59
YIF1A-206ENST00000474986 KIF24Q5T7B8 1368 aa31.21■■■□□ 2.59
YIF1A-206ENST00000474986 IP6K1Q92551 441 aa31.21■■■□□ 2.59
YIF1A-206ENST00000474986 CCDC9Q9Y3X0 531 aaKnown RBP31.21■■■□□ 2.59
YIF1A-206ENST00000474986 BLMP54132 1417 aaPredicted RBP31.21■■■□□ 2.59
YIF1A-206ENST00000474986 SPATA31A5Q5VU36 1347 aa31.21■■■□□ 2.59
YIF1A-206ENST00000474986 SPATA31A7Q8IWB4 1347 aa31.21■■■□□ 2.59
YIF1A-206ENST00000474986 ANKRD26Q9UPS8 1709 aa31.21■■■□□ 2.59
YIF1A-206ENST00000474986 FBLN1P23142 703 aa31.19■■■□□ 2.58
YIF1A-206ENST00000474986 LTN1O94822 1766 aa31.18■■■□□ 2.58
YIF1A-206ENST00000474986 RRS1Q15050 365 aaKnown RBP31.18■■■□□ 2.58
YIF1A-206ENST00000474986 GLI3P10071 1580 aa31.17■■■□□ 2.58
YIF1A-206ENST00000474986 AMPHP49418 695 aa31.17■■■□□ 2.58
YIF1A-206ENST00000474986 LARP1Q6PKG0 1096 aaKnown RBP31.17■■■□□ 2.58
YIF1A-206ENST00000474986 MORC1Q86VD1 984 aa31.17■■■□□ 2.58
YIF1A-206ENST00000474986 SPATA31A1Q5TZJ5 1347 aa31.17■■■□□ 2.58
YIF1A-206ENST00000474986 WDR17Q8IZU2 1322 aa31.17■■■□□ 2.58
YIF1A-206ENST00000474986 CRB1P82279 1406 aa31.15■■■□□ 2.58
YIF1A-206ENST00000474986 HOXC9P31274 260 aa31.15■■■□□ 2.58
YIF1A-206ENST00000474986 ERBB3P21860 1342 aa31.15■■■□□ 2.58
YIF1A-206ENST00000474986 ONECUT3O60422 494 aaPredicted RBP31.14■■■□□ 2.58
YIF1A-206ENST00000474986 FLT4P35916 1363 aa31.13■■■□□ 2.57
YIF1A-206ENST00000474986 THRAP3Q9Y2W1 955 aaKnown RBP31.12■■■□□ 2.57
YIF1A-206ENST00000474986 RGS12O14924 1447 aa31.12■■■□□ 2.57
YIF1A-206ENST00000474986 CSB-PGBD3P0DP91 1061 aa31.1■■■□□ 2.57
YIF1A-206ENST00000474986 TOM1L2Q6ZVM7 507 aa31.1■■■□□ 2.57
YIF1A-206ENST00000474986 ANKRD24Q8TF21 1146 aa31.1■■■□□ 2.57
YIF1A-206ENST00000474986 POLKQ9UBT6 870 aa31.1■■■□□ 2.57
YIF1A-206ENST00000474986 EMILIN1Q9Y6C2 1016 aa31.1■■■□□ 2.57
YIF1A-206ENST00000474986 BARGINQ6ZT62 677 aa31.09■■■□□ 2.57
YIF1A-206ENST00000474986 TCP11L2Q8N4U5 519 aa31.09■■■□□ 2.57
YIF1A-206ENST00000474986 CARD10Q9BWT7 1032 aa31.09■■■□□ 2.57
YIF1A-206ENST00000474986 INSRP06213 1382 aa31.08■■■□□ 2.57
YIF1A-206ENST00000474986 TNNT2P45379 298 aaPredicted RBP31.08■■■□□ 2.57
YIF1A-206ENST00000474986 CC2D1BQ5T0F9 858 aaKnown RBP31.08■■■□□ 2.57
YIF1A-206ENST00000474986 FAM98CQ17RN3 349 aaKnown RBP31.06■■■□□ 2.56
YIF1A-206ENST00000474986 RGPD5Q99666 1765 aa31.06■■■□□ 2.56
YIF1A-206ENST00000474986 SMG6Q86US8 1419 aaKnown RBP31.06■■■□□ 2.56
YIF1A-206ENST00000474986 ZNF316A6NFI3 1004 aaPredicted RBP31.05■■■□□ 2.56
YIF1A-206ENST00000474986 USP35Q9P2H5 1018 aa31.05■■■□□ 2.56
YIF1A-206ENST00000474986 DDX10Q13206 875 aaKnown RBP31.04■■■□□ 2.56
YIF1A-206ENST00000474986 SEPT12Q8IYM1 358 aa31.04■■■□□ 2.56
YIF1A-206ENST00000474986 PEAK1Q9H792 1746 aa31.04■■■□□ 2.56
YIF1A-206ENST00000474986 HSP90AB2PQ58FF8 381 aa31.03■■■□□ 2.56
YIF1A-206ENST00000474986 PPM1GO15355 546 aaPredicted RBP31.02■■■□□ 2.56
YIF1A-206ENST00000474986 NLRP2Q9NX02 1062 aa31.01■■■□□ 2.55
YIF1A-206ENST00000474986 LTV1Q96GA3 475 aaPredicted RBP31■■■□□ 2.55
YIF1A-206ENST00000474986 MAP2P11137 1827 aaKnown RBP31■■■□□ 2.55
YIF1A-206ENST00000474986 CDCA7Q9BWT1 371 aaPredicted RBP30.99■■■□□ 2.55
YIF1A-206ENST00000474986 FAM208AQ9UK61 1670 aaKnown RBP30.99■■■□□ 2.55
YIF1A-206ENST00000474986 THSD7AQ9UPZ6 1657 aa30.99■■■□□ 2.55
YIF1A-206ENST00000474986 A0A0G2JS52 829 aa30.97■■■□□ 2.55
YIF1A-206ENST00000474986 MYT1Q01538 1121 aa30.97■■■□□ 2.55
YIF1A-206ENST00000474986 DISP2A7MBM2 1401 aa30.94■■■□□ 2.54
YIF1A-206ENST00000474986 CNGB1Q14028 1251 aaPredicted RBP30.92■■■□□ 2.54
YIF1A-206ENST00000474986 MTHFSP49914 203 aa30.9■■■□□ 2.54
YIF1A-206ENST00000474986 NBPF6Q5VWK0 638 aa30.9■■■□□ 2.54
YIF1A-206ENST00000474986 KRT27Q7Z3Y8 459 aa30.9■■■□□ 2.54
YIF1A-206ENST00000474986 NBPF4Q96M43 638 aa30.9■■■□□ 2.54
YIF1A-206ENST00000474986 EIF4A2Q14240 407 aaKnown RBP30.89■■■□□ 2.54
YIF1A-206ENST00000474986 IL2RBP14784 551 aa30.88■■■□□ 2.53
YIF1A-206ENST00000474986 PARD3Q8TEW0 1356 aa30.88■■■□□ 2.53
YIF1A-206ENST00000474986 PARP4Q9UKK3 1724 aaKnown RBP30.87■■■□□ 2.53
YIF1A-206ENST00000474986 NCAPD2Q15021 1401 aa30.86■■■□□ 2.53
YIF1A-206ENST00000474986 DDB1Q16531 1140 aa30.85■■■□□ 2.53
YIF1A-206ENST00000474986 WNK3Q9BYP7 1800 aa30.84■■■□□ 2.53
YIF1A-206ENST00000474986 PDE3BQ13370 1112 aa30.84■■■□□ 2.53
YIF1A-206ENST00000474986 BRWD3Q6RI45 1802 aa30.84■■■□□ 2.53
YIF1A-206ENST00000474986 PPP2R1AP30153 589 aa30.83■■■□□ 2.53
YIF1A-206ENST00000474986 RALBP1Q15311 655 aa30.83■■■□□ 2.53
YIF1A-206ENST00000474986 EYA1Q99502 592 aa30.83■■■□□ 2.53
YIF1A-206ENST00000474986 EXOC5O00471 708 aa30.81■■■□□ 2.52
YIF1A-206ENST00000474986 TNS2Q63HR2 1409 aa30.81■■■□□ 2.52
YIF1A-206ENST00000474986 LRRC37A3O60309 1634 aa30.8■■■□□ 2.52
YIF1A-206ENST00000474986 IGSF1Q8N6C5 1336 aa30.8■■■□□ 2.52
YIF1A-206ENST00000474986 USHBP1Q8N6Y0 703 aa30.8■■■□□ 2.52
YIF1A-206ENST00000474986 IL13P35225 146 aa30.79■■■□□ 2.52
YIF1A-206ENST00000474986 RAPGEF4Q8WZA2 1011 aa30.79■■■□□ 2.52
YIF1A-206ENST00000474986 RGPD2P0DJD1 1756 aa30.79■■■□□ 2.52
YIF1A-206ENST00000474986 CFAP53Q96M91 514 aa30.77■■■□□ 2.52
YIF1A-206ENST00000474986 OVOS2A0A0G2JMS6 1433 aa30.76■■■□□ 2.51
YIF1A-206ENST00000474986 DIAPH1O60610 1272 aaKnown RBP30.76■■■□□ 2.51
YIF1A-206ENST00000474986 MEGF6O75095 1541 aa30.76■■■□□ 2.51
YIF1A-206ENST00000474986 TATP17735 454 aaPredicted RBP30.75■■■□□ 2.51
YIF1A-206ENST00000474986 PLEKHG2Q9H7P9 1386 aa30.75■■■□□ 2.51
YIF1A-206ENST00000474986 COL3A1P02461 1466 aaPredicted RBP30.75■■■□□ 2.51
YIF1A-206ENST00000474986 FAM196AQ6ZSG2 479 aa30.74■■■□□ 2.51
YIF1A-206ENST00000474986 UPF1Q92900 1129 aaKnown RBP eCLIP30.72■■■□□ 2.51
YIF1A-206ENST00000474986 MARCH10Q8NA82 808 aaPredicted RBP30.71■■■□□ 2.51
YIF1A-206ENST00000474986 BCL9O00512 1426 aa30.71■■■□□ 2.51
YIF1A-206ENST00000474986 KDRP35968 1356 aa30.7■■■□□ 2.51
YIF1A-206ENST00000474986 ZCRB1Q8TBF4 217 aaKnown RBP30.7■■■□□ 2.51
YIF1A-206ENST00000474986 FAM182BQ5T319 152 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms