RNA–Protein interactions for RNA: ENST00000474721.1

PIKFYVE-208, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 4

Gene PIKFYVE, Length 538 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-208ENST00000474721 LRRN4Q8WUT4 740 aa8.43□□□□□ -1.06
PIKFYVE-208ENST00000474721 PGPEP1Q9NXJ5 209 aa8.43□□□□□ -1.06
PIKFYVE-208ENST00000474721 CDV3Q9UKY7 258 aaKnown RBP8.43□□□□□ -1.06
PIKFYVE-208ENST00000474721 SLC10A4Q96EP9 437 aa8.42□□□□□ -1.06
PIKFYVE-208ENST00000474721 ZC3H4Q9UPT8 1303 aaKnown RBP8.41□□□□□ -1.06
PIKFYVE-208ENST00000474721 PTK2Q05397 1052 aa8.41□□□□□ -1.06
PIKFYVE-208ENST00000474721 PROCA1Q8NCQ7 364 aaPredicted RBP8.41□□□□□ -1.06
PIKFYVE-208ENST00000474721 PNMA1Q8ND90 353 aa8.41□□□□□ -1.06
PIKFYVE-208ENST00000474721 GPBP1L1Q9HC44 474 aaPredicted RBP8.41□□□□□ -1.06
PIKFYVE-208ENST00000474721 AP1G2O75843 785 aa8.4□□□□□ -1.06
PIKFYVE-208ENST00000474721 DHX9Q08211 1270 aaKnown RBP8.4□□□□□ -1.06
PIKFYVE-208ENST00000474721 NR6A1Q15406 480 aa8.4□□□□□ -1.06
PIKFYVE-208ENST00000474721 PPP1R26Q5T8A7 1209 aaPredicted RBP8.4□□□□□ -1.06
PIKFYVE-208ENST00000474721 FAM117AQ9C073 453 aa8.4□□□□□ -1.06
PIKFYVE-208ENST00000474721 SOS2Q07890 1332 aaPredicted RBP8.39□□□□□ -1.07
PIKFYVE-208ENST00000474721 PPP2R2DQ66LE6 453 aa8.39□□□□□ -1.07
PIKFYVE-208ENST00000474721 BCANQ96GW7 911 aa8.39□□□□□ -1.07
PIKFYVE-208ENST00000474721 KCTD15Q96SI1 283 aaPredicted RBP8.39□□□□□ -1.07
PIKFYVE-208ENST00000474721 PPFIA3O75145 1194 aa8.38□□□□□ -1.07
PIKFYVE-208ENST00000474721 VSIG8P0DPA2 414 aa8.38□□□□□ -1.07
PIKFYVE-208ENST00000474721 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.38□□□□□ -1.07
PIKFYVE-208ENST00000474721 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.38□□□□□ -1.07
PIKFYVE-208ENST00000474721 GPSM3Q9Y4H4 160 aa8.38□□□□□ -1.07
PIKFYVE-208ENST00000474721 TTLL8A6PVC2 850 aa8.37□□□□□ -1.07
PIKFYVE-208ENST00000474721 DNMT3LQ9UJW3 386 aa8.37□□□□□ -1.07
PIKFYVE-208ENST00000474721 CBLBQ13191 982 aa8.35□□□□□ -1.07
PIKFYVE-208ENST00000474721 Q6ZVU0 165 aa8.35□□□□□ -1.07
PIKFYVE-208ENST00000474721 FIGNL2A6NMB9 653 aa8.34□□□□□ -1.07
PIKFYVE-208ENST00000474721 LORP23490 312 aaPredicted RBP8.34□□□□□ -1.07
PIKFYVE-208ENST00000474721 NBPF20Q3BBV1 942 aa8.34□□□□□ -1.07
PIKFYVE-208ENST00000474721 FBXO31Q5XUX0 539 aaPredicted RBP8.34□□□□□ -1.07
PIKFYVE-208ENST00000474721 ADAM32Q8TC27 787 aa8.34□□□□□ -1.07
PIKFYVE-208ENST00000474721 SPINT1O43278 529 aa8.33□□□□□ -1.08
PIKFYVE-208ENST00000474721 PTSQ03393 145 aa8.32□□□□□ -1.08
PIKFYVE-208ENST00000474721 INTS6LQ5JSJ4 861 aaKnown RBP8.32□□□□□ -1.08
PIKFYVE-208ENST00000474721 DZIP3Q86Y13 1208 aaKnown RBP8.32□□□□□ -1.08
PIKFYVE-208ENST00000474721 USP17L8P0C7I0 530 aa8.31□□□□□ -1.08
PIKFYVE-208ENST00000474721 TRIM52Q96A61 297 aa8.31□□□□□ -1.08
PIKFYVE-208ENST00000474721 RAB15P59190 212 aa8.3□□□□□ -1.08
PIKFYVE-208ENST00000474721 RELBQ01201 579 aa8.3□□□□□ -1.08
PIKFYVE-208ENST00000474721 EPS8L1Q8TE68 723 aa8.3□□□□□ -1.08
PIKFYVE-208ENST00000474721 PCMTD1Q96MG8 357 aaPredicted RBP8.3□□□□□ -1.08
PIKFYVE-208ENST00000474721 AGBL1Q96MI9 1066 aa8.3□□□□□ -1.08
PIKFYVE-208ENST00000474721 OCSTAMPQ9BR26 566 aa8.3□□□□□ -1.08
PIKFYVE-208ENST00000474721 RFC5P40937 340 aa8.29□□□□□ -1.08
PIKFYVE-208ENST00000474721 POLMQ9NP87 494 aaPredicted RBP8.29□□□□□ -1.08
PIKFYVE-208ENST00000474721 TMEM259Q4ZIN3 620 aa8.28□□□□□ -1.08
PIKFYVE-208ENST00000474721 CCDC155Q8N6L0 562 aa8.28□□□□□ -1.08
PIKFYVE-208ENST00000474721 HMX1Q9NP08 348 aaPredicted RBP8.28□□□□□ -1.08
PIKFYVE-208ENST00000474721 CTSOP43234 321 aaPredicted RBP8.27□□□□□ -1.09
PIKFYVE-208ENST00000474721 INSM2Q96T92 566 aaPredicted RBP8.27□□□□□ -1.09
PIKFYVE-208ENST00000474721 ZNF395Q9H8N7 513 aaPredicted RBP8.27□□□□□ -1.09
PIKFYVE-208ENST00000474721 TMPRSS4Q9NRS4 437 aa8.27□□□□□ -1.09
PIKFYVE-208ENST00000474721 ZNF784Q8NCA9 323 aaPredicted RBP8.26□□□□□ -1.09
PIKFYVE-208ENST00000474721 CNTNAP3BQ96NU0 1288 aa8.26□□□□□ -1.09
PIKFYVE-208ENST00000474721 CNTNAP3Q9BZ76 1288 aa8.26□□□□□ -1.09
PIKFYVE-208ENST00000474721 GOPCQ9HD26 462 aa8.26□□□□□ -1.09
PIKFYVE-208ENST00000474721 NANOS1Q8WY41 292 aaKnown RBP8.25□□□□□ -1.09
PIKFYVE-208ENST00000474721 SLC35F4A4IF30 521 aa8.24□□□□□ -1.09
PIKFYVE-208ENST00000474721 ERVH48-1M5A8F1 160 aa8.24□□□□□ -1.09
PIKFYVE-208ENST00000474721 ADH1AP07327 375 aa8.24□□□□□ -1.09
PIKFYVE-208ENST00000474721 SEPT12Q8IYM1 358 aa8.24□□□□□ -1.09
PIKFYVE-208ENST00000474721 GPR161Q8N6U8 529 aaKnown RBP8.24□□□□□ -1.09
PIKFYVE-208ENST00000474721 COL25A1Q9BXS0 654 aaPredicted RBP8.24□□□□□ -1.09
PIKFYVE-208ENST00000474721 ITGA6P23229 1130 aa8.23□□□□□ -1.09
PIKFYVE-208ENST00000474721 PTGIRP43119 386 aa8.23□□□□□ -1.09
PIKFYVE-208ENST00000474721 NEUROD2Q15784 382 aa8.23□□□□□ -1.09
PIKFYVE-208ENST00000474721 SV2AQ7L0J3 742 aa8.23□□□□□ -1.09
PIKFYVE-208ENST00000474721 VWA5B2Q8N398 1253 aa8.23□□□□□ -1.09
PIKFYVE-208ENST00000474721 CDC14CA4D256 554 aa8.22□□□□□ -1.09
PIKFYVE-208ENST00000474721 ZBBXA8MT70 800 aa8.22□□□□□ -1.09
PIKFYVE-208ENST00000474721 ESPNB1AK53 854 aa8.22□□□□□ -1.09
PIKFYVE-208ENST00000474721 RNF217Q8TC41 542 aa8.22□□□□□ -1.09
PIKFYVE-208ENST00000474721 PCDHB9Q9Y5E1 797 aa8.22□□□□□ -1.09
PIKFYVE-208ENST00000474721 LILRA1O75019 489 aa8.21□□□□□ -1.1
PIKFYVE-208ENST00000474721 ADD1P35611 737 aaKnown RBP8.21□□□□□ -1.1
PIKFYVE-208ENST00000474721 IL27Q8NEV9 243 aa8.21□□□□□ -1.1
PIKFYVE-208ENST00000474721 TRIM34Q9BYJ4 488 aa8.21□□□□□ -1.1
PIKFYVE-208ENST00000474721 KRT76Q01546 638 aa8.2□□□□□ -1.1
PIKFYVE-208ENST00000474721 LYSMD3Q7Z3D4 306 aa8.2□□□□□ -1.1
PIKFYVE-208ENST00000474721 CCDC125Q86Z20 511 aa8.2□□□□□ -1.1
PIKFYVE-208ENST00000474721 CYLDQ9NQC7 956 aa8.2□□□□□ -1.1
PIKFYVE-208ENST00000474721 GIGYF1O75420 1035 aaPredicted RBP8.18□□□□□ -1.1
PIKFYVE-208ENST00000474721 RNF20Q5VTR2 975 aa8.18□□□□□ -1.1
PIKFYVE-208ENST00000474721 ZNF592Q92610 1267 aa8.18□□□□□ -1.1
PIKFYVE-208ENST00000474721 ATP5J2-PTCD1G3V325 749 aa8.17□□□□□ -1.1
PIKFYVE-208ENST00000474721 MCCD1P59942 119 aaPredicted RBP8.17□□□□□ -1.1
PIKFYVE-208ENST00000474721 KCNMA1Q12791 1236 aa8.17□□□□□ -1.1
PIKFYVE-208ENST00000474721 FOXD4L5Q5VV16 416 aaPredicted RBP8.17□□□□□ -1.1
PIKFYVE-208ENST00000474721 SVOPQ8N4V2 548 aa8.17□□□□□ -1.1
PIKFYVE-208ENST00000474721 ESF1Q9H501 851 aaKnown RBP8.17□□□□□ -1.1
PIKFYVE-208ENST00000474721 ZNF330Q9Y3S2 320 aaPredicted RBP8.17□□□□□ -1.1
PIKFYVE-208ENST00000474721 RNF225M0QZC1 329 aaPredicted RBP8.16□□□□□ -1.1
PIKFYVE-208ENST00000474721 SLC24A1O60721 1099 aa8.16□□□□□ -1.1
PIKFYVE-208ENST00000474721 FBXO45P0C2W1 286 aa8.16□□□□□ -1.1
PIKFYVE-208ENST00000474721 RNF144AP50876 292 aaPredicted RBP8.16□□□□□ -1.1
PIKFYVE-208ENST00000474721 RNFT1Q5M7Z0 435 aa8.16□□□□□ -1.1
PIKFYVE-208ENST00000474721 PRICKLE2Q7Z3G6 844 aa8.16□□□□□ -1.1
PIKFYVE-208ENST00000474721 KDF1Q8NAX2 398 aaPredicted RBP8.16□□□□□ -1.1
PIKFYVE-208ENST00000474721 ADAMTS8Q9UP79 889 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms