RNA–Protein interactions for RNA: ENST00000474721.1

PIKFYVE-208, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 4

Gene PIKFYVE, Length 538 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-208ENST00000474721 AEBP2Q6ZN18 517 aaPredicted RBP24.22■■□□□ 1.47
PIKFYVE-208ENST00000474721 CHIC1Q5VXU3 224 aa23.15■■□□□ 1.3
PIKFYVE-208ENST00000474721 SENP3Q9H4L4 574 aaPredicted RBP20.75■□□□□ 0.91
PIKFYVE-208ENST00000474721 PHF23Q9BUL5 403 aaPredicted RBP20.47■□□□□ 0.87
PIKFYVE-208ENST00000474721 FOXD1Q16676 465 aa19.26■□□□□ 0.67
PIKFYVE-208ENST00000474721 PLPPR3Q6T4P5 718 aa18.59■□□□□ 0.57
PIKFYVE-208ENST00000474721 PIAS4Q8N2W9 510 aaPredicted RBP18.08■□□□□ 0.48
PIKFYVE-208ENST00000474721 MSH5O43196 834 aa18.07■□□□□ 0.48
PIKFYVE-208ENST00000474721 PPP6R1Q9UPN7 881 aa18.06■□□□□ 0.48
PIKFYVE-208ENST00000474721 ADRA2BP18089 450 aa18.05■□□□□ 0.48
PIKFYVE-208ENST00000474721 POTEDQ86YR6 584 aa17.4■□□□□ 0.38
PIKFYVE-208ENST00000474721 SCAF1Q9H7N4 1312 aaKnown RBP16.63■□□□□ 0.25
PIKFYVE-208ENST00000474721 MAPK8IP2Q13387 824 aaPredicted RBP16.54■□□□□ 0.24
PIKFYVE-208ENST00000474721 DMRT2Q9Y5R5 561 aa16.43■□□□□ 0.22
PIKFYVE-208ENST00000474721 PPP4R3CPQ6ZMV5 832 aa16.29■□□□□ 0.2
PIKFYVE-208ENST00000474721 CNKSR2Q8WXI2 1034 aa15.98■□□□□ 0.15
PIKFYVE-208ENST00000474721 HOXD11P31277 338 aaPredicted RBP15.86■□□□□ 0.13
PIKFYVE-208ENST00000474721 DCAF8L1A6NGE4 600 aa15.84■□□□□ 0.13
PIKFYVE-208ENST00000474721 RNF216Q9NWF9 866 aaPredicted RBP15.8■□□□□ 0.12
PIKFYVE-208ENST00000474721 NCBP3Q53F19 620 aaKnown RBP15.77■□□□□ 0.12
PIKFYVE-208ENST00000474721 CACNB1Q02641 598 aaPredicted RBP15.46■□□□□ 0.07
PIKFYVE-208ENST00000474721 NPM3O75607 178 aaKnown RBP15.44■□□□□ 0.06
PIKFYVE-208ENST00000474721 RNF39Q9H2S5 420 aa15.37■□□□□ 0.05
PIKFYVE-208ENST00000474721 DNAJC5BQ9UF47 199 aa15.32■□□□□ 0.04
PIKFYVE-208ENST00000474721 KCNA4P22459 653 aa15.22■□□□□ 0.03
PIKFYVE-208ENST00000474721 C1QBPQ07021 282 aaKnown RBP15.2■□□□□ 0.02
PIKFYVE-208ENST00000474721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.2■□□□□ 0.02
PIKFYVE-208ENST00000474721 U3KPZ7 1027 aaPredicted RBP14.79□□□□□ -0.04
PIKFYVE-208ENST00000474721 SLC4A2P04920 1241 aa14.69□□□□□ -0.06
PIKFYVE-208ENST00000474721 CAPN15O75808 1086 aa14.6□□□□□ -0.07
PIKFYVE-208ENST00000474721 SPINK5Q9NQ38 1064 aaPredicted RBP14.55□□□□□ -0.08
PIKFYVE-208ENST00000474721 APLP2Q06481 763 aa14.54□□□□□ -0.08
PIKFYVE-208ENST00000474721 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.52□□□□□ -0.09
PIKFYVE-208ENST00000474721 HNRNPUL2Q1KMD3 747 aaKnown RBP14.52□□□□□ -0.09
PIKFYVE-208ENST00000474721 SLC4A1APQ9BWU0 796 aaKnown RBP14.45□□□□□ -0.1
PIKFYVE-208ENST00000474721 DSG3P32926 999 aa14.42□□□□□ -0.1
PIKFYVE-208ENST00000474721 SAMD1Q6SPF0 538 aaPredicted RBP14.42□□□□□ -0.1
PIKFYVE-208ENST00000474721 TRHP20396 242 aaPredicted RBP14.39□□□□□ -0.11
PIKFYVE-208ENST00000474721 ZNF219Q9P2Y4 722 aaPredicted RBP14.37□□□□□ -0.11
PIKFYVE-208ENST00000474721 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
PIKFYVE-208ENST00000474721 ABCB7O75027 752 aa14.24□□□□□ -0.13
PIKFYVE-208ENST00000474721 FOXD4L1Q9NU39 408 aa14.21□□□□□ -0.13
PIKFYVE-208ENST00000474721 POLA2Q14181 598 aa14.01□□□□□ -0.17
PIKFYVE-208ENST00000474721 ZBTB22O15209 634 aa13.95□□□□□ -0.18
PIKFYVE-208ENST00000474721 ATF5Q9Y2D1 282 aaPredicted RBP13.91□□□□□ -0.18
PIKFYVE-208ENST00000474721 RBM42Q9BTD8 480 aaKnown RBP13.84□□□□□ -0.19
PIKFYVE-208ENST00000474721 ATXN8OSP0DMR3 200 aa13.79□□□□□ -0.2
PIKFYVE-208ENST00000474721 ZBTB12Q9Y330 459 aaPredicted RBP13.78□□□□□ -0.2
PIKFYVE-208ENST00000474721 POTEHQ6S545 545 aa13.68□□□□□ -0.22
PIKFYVE-208ENST00000474721 OSCARQ8IYS5 282 aa13.53□□□□□ -0.24
PIKFYVE-208ENST00000474721 AKT1S1Q96B36 256 aa13.52□□□□□ -0.25
PIKFYVE-208ENST00000474721 FBLN2P98095 1184 aa13.49□□□□□ -0.25
PIKFYVE-208ENST00000474721 CHRDL2Q6WN34 429 aa13.46□□□□□ -0.25
PIKFYVE-208ENST00000474721 CSRNP3Q8WYN3 585 aa13.43□□□□□ -0.26
PIKFYVE-208ENST00000474721 REM2Q8IYK8 340 aaPredicted RBP13.37□□□□□ -0.27
PIKFYVE-208ENST00000474721 EHMT2Q96KQ7 1210 aa13.37□□□□□ -0.27
PIKFYVE-208ENST00000474721 SPDYE2BA6NHP3 402 aa13.32□□□□□ -0.28
PIKFYVE-208ENST00000474721 SPDYE6P0CI01 402 aa13.32□□□□□ -0.28
PIKFYVE-208ENST00000474721 SPDYE2Q495Y8 402 aa13.32□□□□□ -0.28
PIKFYVE-208ENST00000474721 MKRN4PQ13434 485 aaPredicted RBP13.27□□□□□ -0.29
PIKFYVE-208ENST00000474721 PITPNM1O00562 1244 aa13.21□□□□□ -0.29
PIKFYVE-208ENST00000474721 ZNF692Q9BU19 519 aaPredicted RBP13.2□□□□□ -0.3
PIKFYVE-208ENST00000474721 PIP4P2Q8N4L2 257 aa13.14□□□□□ -0.31
PIKFYVE-208ENST00000474721 SSUH2Q9Y2M2 353 aa13.1□□□□□ -0.31
PIKFYVE-208ENST00000474721 SPDYE1Q8NFV5 336 aaPredicted RBP13.09□□□□□ -0.31
PIKFYVE-208ENST00000474721 FXR2P51116 673 aaKnown RBP eCLIP13.07□□□□□ -0.325e-7■□□□□ 9.5
PIKFYVE-208ENST00000474721 CLEC11AQ9Y240 323 aa13.07□□□□□ -0.32
PIKFYVE-208ENST00000474721 PABPN1Q86U42 306 aaKnown RBP eCLIP12.98□□□□□ -0.33
PIKFYVE-208ENST00000474721 HAX1O00165 279 aa12.94□□□□□ -0.34
PIKFYVE-208ENST00000474721 PRKAR2AP13861 404 aaKnown RBP12.9□□□□□ -0.34
PIKFYVE-208ENST00000474721 SP7Q8TDD2 431 aaPredicted RBP12.88□□□□□ -0.35
PIKFYVE-208ENST00000474721 PRR29P0C7W0 189 aa12.87□□□□□ -0.35
PIKFYVE-208ENST00000474721 SPDYE4A6NLX3 237 aa12.78□□□□□ -0.36
PIKFYVE-208ENST00000474721 CHADLQ6NUI6 762 aa12.75□□□□□ -0.37
PIKFYVE-208ENST00000474721 STAG3Q9UJ98 1225 aa12.71□□□□□ -0.37
PIKFYVE-208ENST00000474721 EVX2Q03828 476 aa12.67□□□□□ -0.38
PIKFYVE-208ENST00000474721 C19orf67A6NJJ6 358 aa12.66□□□□□ -0.38
PIKFYVE-208ENST00000474721 FARP1Q9Y4F1 1045 aaPredicted RBP12.6□□□□□ -0.39
PIKFYVE-208ENST00000474721 CD44P16070 742 aaKnown RBP12.5□□□□□ -0.41
PIKFYVE-208ENST00000474721 CREBZFQ9NS37 354 aa12.5□□□□□ -0.41
PIKFYVE-208ENST00000474721 GABBR2O75899 941 aa12.45□□□□□ -0.42
PIKFYVE-208ENST00000474721 PROM2Q8N271 834 aa12.4□□□□□ -0.42
PIKFYVE-208ENST00000474721 NPM1P06748 294 aaKnown RBP eCLIP12.38□□□□□ -0.43
PIKFYVE-208ENST00000474721 CLCN6P51797 869 aa12.37□□□□□ -0.43
PIKFYVE-208ENST00000474721 ZRANB1Q9UGI0 708 aa12.35□□□□□ -0.43
PIKFYVE-208ENST00000474721 PAK3O75914 559 aaPredicted RBP12.34□□□□□ -0.43
PIKFYVE-208ENST00000474721 ZNF579Q8NAF0 562 aaKnown RBP12.29□□□□□ -0.44
PIKFYVE-208ENST00000474721 PLEKHG5O94827 1062 aa12.27□□□□□ -0.45
PIKFYVE-208ENST00000474721 MNX1P50219 401 aaPredicted RBP12.26□□□□□ -0.45
PIKFYVE-208ENST00000474721 FKBP8Q14318 412 aa12.23□□□□□ -0.45
PIKFYVE-208ENST00000474721 MIER1Q8N108 512 aa12.23□□□□□ -0.45
PIKFYVE-208ENST00000474721 DCBLD2Q96PD2 775 aa12.21□□□□□ -0.45
PIKFYVE-208ENST00000474721 PLCD3Q8N3E9 789 aa12.15□□□□□ -0.46
PIKFYVE-208ENST00000474721 PHF12Q96QT6 1004 aa12.15□□□□□ -0.46
PIKFYVE-208ENST00000474721 POTEIP0CG38 1075 aa12.13□□□□□ -0.47
PIKFYVE-208ENST00000474721 GALR2O43603 387 aaPredicted RBP12.11□□□□□ -0.47
PIKFYVE-208ENST00000474721 TSPYL2Q9H2G4 693 aaPredicted RBP12.11□□□□□ -0.47
PIKFYVE-208ENST00000474721 LHX8Q68G74 356 aa12.1□□□□□ -0.47
PIKFYVE-208ENST00000474721 ZBTB47Q9UFB7 747 aaPredicted RBP12.07□□□□□ -0.48
PIKFYVE-208ENST00000474721 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms