RNA–Protein interactions for RNA: ENST00000474619.1

SEC23B-207, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 5

Gene SEC23B, Length 232 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-207ENST00000474619 NSD3Q9BZ95 1437 aa17.1■□□□□ 0.33
SEC23B-207ENST00000474619 GLI3P10071 1580 aa17.1■□□□□ 0.33
SEC23B-207ENST00000474619 USP54Q70EL1 1684 aa17.1■□□□□ 0.33
SEC23B-207ENST00000474619 TCP11L2Q8N4U5 519 aa17.09■□□□□ 0.33
SEC23B-207ENST00000474619 IP6K1Q92551 441 aa17.09■□□□□ 0.33
SEC23B-207ENST00000474619 COL5A2P05997 1499 aaPredicted RBP17.09■□□□□ 0.33
SEC23B-207ENST00000474619 LMO7Q8WWI1 1683 aa17.09■□□□□ 0.33
SEC23B-207ENST00000474619 NRAPQ86VF7 1730 aa17.09■□□□□ 0.33
SEC23B-207ENST00000474619 WDR17Q8IZU2 1322 aa17.08■□□□□ 0.32
SEC23B-207ENST00000474619 MYOM1P52179 1685 aa17.07■□□□□ 0.32
SEC23B-207ENST00000474619 TOM1L2Q6ZVM7 507 aa17.07■□□□□ 0.32
SEC23B-207ENST00000474619 USP35Q9P2H5 1018 aa17.07■□□□□ 0.32
SEC23B-207ENST00000474619 CRB1P82279 1406 aa17.06■□□□□ 0.32
SEC23B-207ENST00000474619 FBLN1P23142 703 aa17.06■□□□□ 0.32
SEC23B-207ENST00000474619 ZEB1P37275 1124 aaPredicted RBP17.06■□□□□ 0.32
SEC23B-207ENST00000474619 KRT27Q7Z3Y8 459 aa17.06■□□□□ 0.32
SEC23B-207ENST00000474619 UPF1Q92900 1129 aaKnown RBP eCLIP17.06■□□□□ 0.32
SEC23B-207ENST00000474619 CARD10Q9BWT7 1032 aa17.06■□□□□ 0.32
SEC23B-207ENST00000474619 KNSTRNQ9Y448 316 aa17.06■□□□□ 0.32
SEC23B-207ENST00000474619 ABCC6O95255 1503 aa17.06■□□□□ 0.32
SEC23B-207ENST00000474619 COL18A1P39060 1754 aa17.05■□□□□ 0.32
SEC23B-207ENST00000474619 MAP3K19Q56UN5 1328 aa17.05■□□□□ 0.32
SEC23B-207ENST00000474619 WASHC2AQ641Q2 1341 aa17.05■□□□□ 0.32
SEC23B-207ENST00000474619 CSB-PGBD3P0DP91 1061 aa17.05■□□□□ 0.32
SEC23B-207ENST00000474619 AMPHP49418 695 aa17.05■□□□□ 0.32
SEC23B-207ENST00000474619 CCDC7Q96M83 1385 aa17.04■□□□□ 0.32
SEC23B-207ENST00000474619 A0A0G2JS52 829 aa17.04■□□□□ 0.32
SEC23B-207ENST00000474619 MYT1Q01538 1121 aa17.04■□□□□ 0.32
SEC23B-207ENST00000474619 PER1O15534 1290 aaPredicted RBP17.03■□□□□ 0.32
SEC23B-207ENST00000474619 HOXC9P31274 260 aa17.03■□□□□ 0.32
SEC23B-207ENST00000474619 CCDC125Q86Z20 511 aa17.03■□□□□ 0.32
SEC23B-207ENST00000474619 ANKRD24Q8TF21 1146 aa17.03■□□□□ 0.32
SEC23B-207ENST00000474619 CDCA7Q9BWT1 371 aaPredicted RBP17.03■□□□□ 0.32
SEC23B-207ENST00000474619 BLMP54132 1417 aaPredicted RBP17.03■□□□□ 0.32
SEC23B-207ENST00000474619 NSD2O96028 1365 aa17.02■□□□□ 0.32
SEC23B-207ENST00000474619 KIF24Q5T7B8 1368 aa17.02■□□□□ 0.32
SEC23B-207ENST00000474619 ERBB3P21860 1342 aa17.02■□□□□ 0.32
SEC23B-207ENST00000474619 RRS1Q15050 365 aaKnown RBP17.02■□□□□ 0.32
SEC23B-207ENST00000474619 RTL1A6NKG5 1358 aa17■□□□□ 0.31
SEC23B-207ENST00000474619 PDE3BQ13370 1112 aa16.99■□□□□ 0.31
SEC23B-207ENST00000474619 AMER1Q5JTC6 1135 aaPredicted RBP16.99■□□□□ 0.31
SEC23B-207ENST00000474619 NLRP2Q9NX02 1062 aa16.99■□□□□ 0.31
SEC23B-207ENST00000474619 EP400Q96L91 3159 aa16.99■□□□□ 0.31
SEC23B-207ENST00000474619 MORC1Q86VD1 984 aa16.98■□□□□ 0.31
SEC23B-207ENST00000474619 HSP90AB2PQ58FF8 381 aa16.97■□□□□ 0.31
SEC23B-207ENST00000474619 POLKQ9UBT6 870 aa16.97■□□□□ 0.31
SEC23B-207ENST00000474619 INSRP06213 1382 aa16.97■□□□□ 0.31
SEC23B-207ENST00000474619 DDB1Q16531 1140 aa16.96■□□□□ 0.31
SEC23B-207ENST00000474619 FAM196AQ6ZSG2 479 aa16.96■□□□□ 0.31
SEC23B-207ENST00000474619 LTV1Q96GA3 475 aaPredicted RBP16.96■□□□□ 0.31
SEC23B-207ENST00000474619 FLT4P35916 1363 aa16.96■□□□□ 0.31
SEC23B-207ENST00000474619 THSD7AQ9UPZ6 1657 aa16.95■□□□□ 0.3
SEC23B-207ENST00000474619 EXOC5O00471 708 aa16.95■□□□□ 0.3
SEC23B-207ENST00000474619 EMILIN1Q9Y6C2 1016 aa16.95■□□□□ 0.3
SEC23B-207ENST00000474619 KIF20BQ96Q89 1820 aa16.95■□□□□ 0.3
SEC23B-207ENST00000474619 LTN1O94822 1766 aa16.94■□□□□ 0.3
SEC23B-207ENST00000474619 PPM1GO15355 546 aaPredicted RBP16.94■□□□□ 0.3
SEC23B-207ENST00000474619 IL2RBP14784 551 aa16.94■□□□□ 0.3
SEC23B-207ENST00000474619 TNNT2P45379 298 aaPredicted RBP16.94■□□□□ 0.3
SEC23B-207ENST00000474619 NPC1L1Q9UHC9 1359 aa16.93■□□□□ 0.3
SEC23B-207ENST00000474619 RGPD5Q99666 1765 aa16.92■□□□□ 0.3
SEC23B-207ENST00000474619 NBPF6Q5VWK0 638 aa16.92■□□□□ 0.3
SEC23B-207ENST00000474619 NBPF4Q96M43 638 aa16.92■□□□□ 0.3
SEC23B-207ENST00000474619 DISP2A7MBM2 1401 aa16.91■□□□□ 0.3
SEC23B-207ENST00000474619 SMG6Q86US8 1419 aaKnown RBP16.91■□□□□ 0.3
SEC23B-207ENST00000474619 FAM182BQ5T319 152 aa16.91■□□□□ 0.3
SEC23B-207ENST00000474619 SF3B2Q13435 895 aaKnown RBP16.9■□□□□ 0.3
SEC23B-207ENST00000474619 BRWD3Q6RI45 1802 aa16.9■□□□□ 0.3
SEC23B-207ENST00000474619 CC2D1BQ5T0F9 858 aaKnown RBP16.89■□□□□ 0.29
SEC23B-207ENST00000474619 MARCH10Q8NA82 808 aaPredicted RBP16.88■□□□□ 0.29
SEC23B-207ENST00000474619 PARP4Q9UKK3 1724 aaKnown RBP16.87■□□□□ 0.29
SEC23B-207ENST00000474619 BCL9O00512 1426 aa16.86■□□□□ 0.29
SEC23B-207ENST00000474619 PEAK1Q9H792 1746 aa16.85■□□□□ 0.29
SEC23B-207ENST00000474619 ANKRD26Q9UPS8 1709 aa16.85■□□□□ 0.29
SEC23B-207ENST00000474619 TRIM37O94972 964 aa16.85■□□□□ 0.29
SEC23B-207ENST00000474619 EIF4A2Q14240 407 aaKnown RBP16.85■□□□□ 0.29
SEC23B-207ENST00000474619 RAPGEF4Q8WZA2 1011 aa16.85■□□□□ 0.29
SEC23B-207ENST00000474619 EYA1Q99502 592 aa16.85■□□□□ 0.29
SEC23B-207ENST00000474619 MTHFSP49914 203 aa16.84■□□□□ 0.29
SEC23B-207ENST00000474619 ZCRB1Q8TBF4 217 aaKnown RBP16.84■□□□□ 0.29
SEC23B-207ENST00000474619 OVOS2A0A0G2JMS6 1433 aa16.84■□□□□ 0.29
SEC23B-207ENST00000474619 FAM208AQ9UK61 1670 aaKnown RBP16.84■□□□□ 0.29
SEC23B-207ENST00000474619 TATP17735 454 aaPredicted RBP16.83■□□□□ 0.28
SEC23B-207ENST00000474619 BAG6P46379 1132 aa16.83■□□□□ 0.28
SEC23B-207ENST00000474619 USHBP1Q8N6Y0 703 aa16.83■□□□□ 0.28
SEC23B-207ENST00000474619 MAP2P11137 1827 aaKnown RBP16.82■□□□□ 0.28
SEC23B-207ENST00000474619 TNS2Q63HR2 1409 aa16.82■□□□□ 0.28
SEC23B-207ENST00000474619 BCL11BQ9C0K0 894 aaPredicted RBP16.82■□□□□ 0.28
SEC23B-207ENST00000474619 APBA3O96018 575 aa16.8■□□□□ 0.28
SEC23B-207ENST00000474619 IL13P35225 146 aa16.8■□□□□ 0.28
SEC23B-207ENST00000474619 DEFB132Q7Z7B7 95 aa16.8■□□□□ 0.28
SEC23B-207ENST00000474619 DDX54Q8TDD1 881 aaKnown RBP16.8■□□□□ 0.28
SEC23B-207ENST00000474619 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.8■□□□□ 0.28
SEC23B-207ENST00000474619 LRRC37A3O60309 1634 aa16.8■□□□□ 0.28
SEC23B-207ENST00000474619 NCAPD2Q15021 1401 aa16.79■□□□□ 0.28
SEC23B-207ENST00000474619 IGSF1Q8N6C5 1336 aa16.79■□□□□ 0.28
SEC23B-207ENST00000474619 DDX10Q13206 875 aaKnown RBP16.78■□□□□ 0.28
SEC23B-207ENST00000474619 CNGB1Q14028 1251 aaPredicted RBP16.78■□□□□ 0.28
SEC23B-207ENST00000474619 PLEKHG2Q9H7P9 1386 aa16.77■□□□□ 0.28
SEC23B-207ENST00000474619 MEGF6O75095 1541 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms