RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 RSBN1LQ6PCB5 846 aaPredicted RBP6.44□□□□□ -1.38
CCDC39-203ENST00000473854 GPKOWQ92917 476 aaPredicted RBP eCLIP6.44□□□□□ -1.38
CCDC39-203ENST00000473854 FIGNL2A6NMB9 653 aa6.43□□□□□ -1.38
CCDC39-203ENST00000473854 CFAP99D6REC4 459 aa6.43□□□□□ -1.38
CCDC39-203ENST00000473854 ADAM23O75077 832 aa6.43□□□□□ -1.38
CCDC39-203ENST00000473854 SRSF11Q05519 484 aaKnown RBP6.43□□□□□ -1.38
CCDC39-203ENST00000473854 Q6ZVU0 165 aa6.43□□□□□ -1.38
CCDC39-203ENST00000473854 SH3RF1Q7Z6J0 888 aa6.43□□□□□ -1.38
CCDC39-203ENST00000473854 VWA5B2Q8N398 1253 aa6.43□□□□□ -1.38
CCDC39-203ENST00000473854 CDV3Q9UKY7 258 aaKnown RBP6.43□□□□□ -1.38
CCDC39-203ENST00000473854 KDM2AQ9Y2K7 1162 aa6.43□□□□□ -1.38
CCDC39-203ENST00000473854 ADAMTS2O95450 1211 aa6.42□□□□□ -1.38
CCDC39-203ENST00000473854 DHX9Q08211 1270 aaKnown RBP6.42□□□□□ -1.38
CCDC39-203ENST00000473854 PODNQ7Z5L7 613 aa6.42□□□□□ -1.38
CCDC39-203ENST00000473854 WHAMMQ8TF30 809 aa6.42□□□□□ -1.38
CCDC39-203ENST00000473854 HRCP23327 699 aa6.41□□□□□ -1.38
CCDC39-203ENST00000473854 LCE3BQ5TA77 95 aa6.41□□□□□ -1.38
CCDC39-203ENST00000473854 BEGAINQ9BUH8 593 aa6.41□□□□□ -1.38
CCDC39-203ENST00000473854 TBC1D2Q9BYX2 928 aa6.41□□□□□ -1.38
CCDC39-203ENST00000473854 AMHR2Q16671 573 aa6.4□□□□□ -1.38
CCDC39-203ENST00000473854 GIGYF2Q6Y7W6 1299 aaKnown RBP6.4□□□□□ -1.38
CCDC39-203ENST00000473854 SH3BP5LQ7L8J4 393 aa6.4□□□□□ -1.38
CCDC39-203ENST00000473854 GALNT6Q8NCL4 622 aa6.4□□□□□ -1.38
CCDC39-203ENST00000473854 MAGEB6P1A0A0J9YX57 407 aa6.39□□□□□ -1.39
CCDC39-203ENST00000473854 PPP1R26Q5T8A7 1209 aaPredicted RBP6.39□□□□□ -1.39
CCDC39-203ENST00000473854 BEND7Q8N7W2 519 aaPredicted RBP6.39□□□□□ -1.39
CCDC39-203ENST00000473854 PLCB2Q00722 1185 aa6.38□□□□□ -1.39
CCDC39-203ENST00000473854 PLA2G4EQ3MJ16 856 aa6.38□□□□□ -1.39
CCDC39-203ENST00000473854 HELBQ8NG08 1087 aaPredicted RBP6.38□□□□□ -1.39
CCDC39-203ENST00000473854 GMCL1Q96IK5 515 aa6.38□□□□□ -1.39
CCDC39-203ENST00000473854 DCAF5Q96JK2 942 aa6.38□□□□□ -1.39
CCDC39-203ENST00000473854 SPOCK3Q9BQ16 436 aa6.38□□□□□ -1.39
CCDC39-203ENST00000473854 CELA2BP08218 269 aaPredicted RBP6.37□□□□□ -1.39
CCDC39-203ENST00000473854 FOXR1Q6PIV2 292 aa6.37□□□□□ -1.39
CCDC39-203ENST00000473854 LYPD4Q6UWN0 246 aa6.37□□□□□ -1.39
CCDC39-203ENST00000473854 TRIM52Q96A61 297 aa6.37□□□□□ -1.39
CCDC39-203ENST00000473854 SLC10A4Q96EP9 437 aa6.37□□□□□ -1.39
CCDC39-203ENST00000473854 PCDHB15Q9Y5E8 787 aa6.37□□□□□ -1.39
CCDC39-203ENST00000473854 BTBD11A6QL63 1104 aa6.36□□□□□ -1.39
CCDC39-203ENST00000473854 CBLBQ13191 982 aa6.36□□□□□ -1.39
CCDC39-203ENST00000473854 ERFEQ4G0M1 354 aa6.36□□□□□ -1.39
CCDC39-203ENST00000473854 RIC3Q7Z5B4 369 aa6.36□□□□□ -1.39
CCDC39-203ENST00000473854 TSC1Q92574 1164 aa6.36□□□□□ -1.39
CCDC39-203ENST00000473854 CARD14Q9BXL6 1004 aa6.36□□□□□ -1.39
CCDC39-203ENST00000473854 POLMQ9NP87 494 aaPredicted RBP6.36□□□□□ -1.39
CCDC39-203ENST00000473854 NUTM2BA6NNL0 878 aaPredicted RBP6.35□□□□□ -1.39
CCDC39-203ENST00000473854 NUTM2EB1AL46 878 aaPredicted RBP6.35□□□□□ -1.39
CCDC39-203ENST00000473854 PER1O15534 1290 aaPredicted RBP6.35□□□□□ -1.39
CCDC39-203ENST00000473854 TUSC1Q2TAM9 212 aa6.35□□□□□ -1.39
CCDC39-203ENST00000473854 NUTM2DQ5VT03 806 aaPredicted RBP6.35□□□□□ -1.39
CCDC39-203ENST00000473854 NUTM2AQ8IVF1 878 aaPredicted RBP6.35□□□□□ -1.39
CCDC39-203ENST00000473854 MBIPQ9NS73 344 aa6.35□□□□□ -1.39
CCDC39-203ENST00000473854 LRRC4BQ9NT99 713 aa6.35□□□□□ -1.39
CCDC39-203ENST00000473854 K7ELQ4 463 aaPredicted RBP6.34□□□□□ -1.39
CCDC39-203ENST00000473854 CTSOP43234 321 aaPredicted RBP6.34□□□□□ -1.39
CCDC39-203ENST00000473854 ALYREFQ86V81 257 aaKnown RBP6.34□□□□□ -1.39
CCDC39-203ENST00000473854 NEDD1Q8NHV4 660 aa6.34□□□□□ -1.39
CCDC39-203ENST00000473854 RNF217Q8TC41 542 aa6.34□□□□□ -1.39
CCDC39-203ENST00000473854 KCTD15Q96SI1 283 aaPredicted RBP6.34□□□□□ -1.39
CCDC39-203ENST00000473854 KRTAP4-8A0A0G2JLE6 195 aa6.33□□□□□ -1.4
CCDC39-203ENST00000473854 RELBQ01201 579 aa6.33□□□□□ -1.4
CCDC39-203ENST00000473854 CABLES1Q8TDN4 633 aa6.33□□□□□ -1.4
CCDC39-203ENST00000473854 INSM2Q96T92 566 aaPredicted RBP6.33□□□□□ -1.4
CCDC39-203ENST00000473854 SENP3-EIF4A1A0A087X0R7 540 aa6.32□□□□□ -1.4
CCDC39-203ENST00000473854 PROCP04070 461 aa6.32□□□□□ -1.4
CCDC39-203ENST00000473854 BCRP11274 1271 aa6.32□□□□□ -1.4
CCDC39-203ENST00000473854 PDXDC2PQ6P474 469 aa6.32□□□□□ -1.4
CCDC39-203ENST00000473854 ARHGAP9Q9BRR9 750 aa6.32□□□□□ -1.4
CCDC39-203ENST00000473854 KRTAP9-9Q9BYP9 154 aa6.32□□□□□ -1.4
CCDC39-203ENST00000473854 KRTAP9-4Q9BYQ2 154 aa6.32□□□□□ -1.4
CCDC39-203ENST00000473854 NSFL1CQ9UNZ2 370 aaKnown RBP6.32□□□□□ -1.4
CCDC39-203ENST00000473854 ZC3H4Q9UPT8 1303 aaKnown RBP6.31□□□□□ -1.4
CCDC39-203ENST00000473854 GAS6Q14393 721 aa6.31□□□□□ -1.4
CCDC39-203ENST00000473854 CSPP1Q1MSJ5 1256 aa6.31□□□□□ -1.4
CCDC39-203ENST00000473854 BARGINQ6ZT62 677 aa6.31□□□□□ -1.4
CCDC39-203ENST00000473854 LYSMD3Q7Z3D4 306 aa6.31□□□□□ -1.4
CCDC39-203ENST00000473854 ZBTB33Q86T24 672 aa6.31□□□□□ -1.4
CCDC39-203ENST00000473854 KRTAP4-12Q9BQ66 201 aa6.31□□□□□ -1.4
CCDC39-203ENST00000473854 CNTNAP5Q8WYK1 1306 aa6.3□□□□□ -1.4
CCDC39-203ENST00000473854 NBPF20Q3BBV1 942 aa6.3□□□□□ -1.4
CCDC39-203ENST00000473854 AGBL1Q96MI9 1066 aa6.3□□□□□ -1.4
CCDC39-203ENST00000473854 IGF1RP08069 1367 aa6.3□□□□□ -1.4
CCDC39-203ENST00000473854 H7C1W4 665 aa6.29□□□□□ -1.4
CCDC39-203ENST00000473854 LILRB3O75022 631 aa6.29□□□□□ -1.4
CCDC39-203ENST00000473854 ADH1AP07327 375 aa6.29□□□□□ -1.4
CCDC39-203ENST00000473854 TRIM22Q8IYM9 498 aa6.29□□□□□ -1.4
CCDC39-203ENST00000473854 TRERF1Q96PN7 1200 aa6.29□□□□□ -1.4
CCDC39-203ENST00000473854 INTS6LQ5JSJ4 861 aaKnown RBP6.28□□□□□ -1.4
CCDC39-203ENST00000473854 Q8N3U1 123 aa6.28□□□□□ -1.4
CCDC39-203ENST00000473854 ZNF837Q96EG3 531 aaPredicted RBP6.28□□□□□ -1.4
CCDC39-203ENST00000473854 ZNF395Q9H8N7 513 aaPredicted RBP6.28□□□□□ -1.4
CCDC39-203ENST00000473854 GPSM3Q9Y4H4 160 aa6.28□□□□□ -1.4
CCDC39-203ENST00000473854 PTGIRP43119 386 aa6.27□□□□□ -1.41
CCDC39-203ENST00000473854 FOXD4L5Q5VV16 416 aaPredicted RBP6.27□□□□□ -1.41
CCDC39-203ENST00000473854 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.27□□□□□ -1.41
CCDC39-203ENST00000473854 PARP9Q8IXQ6 854 aa6.27□□□□□ -1.41
CCDC39-203ENST00000473854 FKBPLQ9UIM3 349 aa6.27□□□□□ -1.41
CCDC39-203ENST00000473854 ZMYND10O75800 440 aa6.26□□□□□ -1.41
CCDC39-203ENST00000473854 ITGB2P05107 769 aa6.26□□□□□ -1.41
CCDC39-203ENST00000473854 BAG6P46379 1132 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms