RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 FBLN1P23142 703 aa24.37■■□□□ 1.49
RPUSD3-214ENST00000473522 FAM98CQ17RN3 349 aaKnown RBP24.37■■□□□ 1.49
RPUSD3-214ENST00000473522 BARGINQ6ZT62 677 aa24.37■■□□□ 1.49
RPUSD3-214ENST00000473522 IP6K1Q92551 441 aa24.37■■□□□ 1.49
RPUSD3-214ENST00000473522 THRAP3Q9Y2W1 955 aaKnown RBP24.37■■□□□ 1.49
RPUSD3-214ENST00000473522 COL5A2P05997 1499 aaPredicted RBP24.37■■□□□ 1.49
RPUSD3-214ENST00000473522 LMO7Q8WWI1 1683 aa24.37■■□□□ 1.49
RPUSD3-214ENST00000473522 WASHC2AQ641Q2 1341 aa24.36■■□□□ 1.49
RPUSD3-214ENST00000473522 WDR17Q8IZU2 1322 aa24.35■■□□□ 1.49
RPUSD3-214ENST00000473522 MYOM1P52179 1685 aa24.35■■□□□ 1.49
RPUSD3-214ENST00000473522 CCDC7Q96M83 1385 aa24.35■■□□□ 1.49
RPUSD3-214ENST00000473522 TCP11L2Q8N4U5 519 aa24.35■■□□□ 1.49
RPUSD3-214ENST00000473522 MAP3K19Q56UN5 1328 aa24.35■■□□□ 1.49
RPUSD3-214ENST00000473522 PER1O15534 1290 aaPredicted RBP24.34■■□□□ 1.49
RPUSD3-214ENST00000473522 NRAPQ86VF7 1730 aa24.34■■□□□ 1.49
RPUSD3-214ENST00000473522 TOM1L2Q6ZVM7 507 aa24.32■■□□□ 1.48
RPUSD3-214ENST00000473522 CARD10Q9BWT7 1032 aa24.32■■□□□ 1.48
RPUSD3-214ENST00000473522 USP35Q9P2H5 1018 aa24.32■■□□□ 1.48
RPUSD3-214ENST00000473522 CRB1P82279 1406 aa24.32■■□□□ 1.48
RPUSD3-214ENST00000473522 ABCC6O95255 1503 aa24.31■■□□□ 1.48
RPUSD3-214ENST00000473522 ZEB1P37275 1124 aaPredicted RBP24.31■■□□□ 1.48
RPUSD3-214ENST00000473522 KNSTRNQ9Y448 316 aa24.31■■□□□ 1.48
RPUSD3-214ENST00000473522 COL18A1P39060 1754 aa24.3■■□□□ 1.48
RPUSD3-214ENST00000473522 HOXC9P31274 260 aa24.3■■□□□ 1.48
RPUSD3-214ENST00000473522 UPF1Q92900 1129 aaKnown RBP eCLIP24.3■■□□□ 1.48
RPUSD3-214ENST00000473522 ERBB3P21860 1342 aa24.3■■□□□ 1.48
RPUSD3-214ENST00000473522 AMPHP49418 695 aa24.29■■□□□ 1.48
RPUSD3-214ENST00000473522 RRS1Q15050 365 aaKnown RBP24.29■■□□□ 1.48
RPUSD3-214ENST00000473522 CSB-PGBD3P0DP91 1061 aa24.28■■□□□ 1.48
RPUSD3-214ENST00000473522 KRT27Q7Z3Y8 459 aa24.28■■□□□ 1.48
RPUSD3-214ENST00000473522 ANKRD24Q8TF21 1146 aa24.28■■□□□ 1.48
RPUSD3-214ENST00000473522 BLMP54132 1417 aaPredicted RBP24.27■■□□□ 1.48
RPUSD3-214ENST00000473522 AMER1Q5JTC6 1135 aaPredicted RBP24.27■■□□□ 1.48
RPUSD3-214ENST00000473522 NSD2O96028 1365 aa24.27■■□□□ 1.48
RPUSD3-214ENST00000473522 KIF24Q5T7B8 1368 aa24.27■■□□□ 1.48
RPUSD3-214ENST00000473522 A0A0G2JS52 829 aa24.24■■□□□ 1.47
RPUSD3-214ENST00000473522 MYT1Q01538 1121 aa24.24■■□□□ 1.47
RPUSD3-214ENST00000473522 CDCA7Q9BWT1 371 aaPredicted RBP24.24■■□□□ 1.47
RPUSD3-214ENST00000473522 RTL1A6NKG5 1358 aa24.24■■□□□ 1.47
RPUSD3-214ENST00000473522 POLKQ9UBT6 870 aa24.23■■□□□ 1.47
RPUSD3-214ENST00000473522 HSP90AB2PQ58FF8 381 aa24.22■■□□□ 1.47
RPUSD3-214ENST00000473522 NLRP2Q9NX02 1062 aa24.22■■□□□ 1.47
RPUSD3-214ENST00000473522 EMILIN1Q9Y6C2 1016 aa24.21■■□□□ 1.47
RPUSD3-214ENST00000473522 MORC1Q86VD1 984 aa24.2■■□□□ 1.46
RPUSD3-214ENST00000473522 CCDC125Q86Z20 511 aa24.2■■□□□ 1.46
RPUSD3-214ENST00000473522 INSRP06213 1382 aa24.19■■□□□ 1.46
RPUSD3-214ENST00000473522 FLT4P35916 1363 aa24.18■■□□□ 1.46
RPUSD3-214ENST00000473522 PDE3BQ13370 1112 aa24.18■■□□□ 1.46
RPUSD3-214ENST00000473522 LTV1Q96GA3 475 aaPredicted RBP24.18■■□□□ 1.46
RPUSD3-214ENST00000473522 NPC1L1Q9UHC9 1359 aa24.17■■□□□ 1.46
RPUSD3-214ENST00000473522 THSD7AQ9UPZ6 1657 aa24.16■■□□□ 1.46
RPUSD3-214ENST00000473522 TNNT2P45379 298 aaPredicted RBP24.16■■□□□ 1.46
RPUSD3-214ENST00000473522 DDB1Q16531 1140 aa24.15■■□□□ 1.46
RPUSD3-214ENST00000473522 NBPF6Q5VWK0 638 aa24.15■■□□□ 1.46
RPUSD3-214ENST00000473522 NBPF4Q96M43 638 aa24.15■■□□□ 1.46
RPUSD3-214ENST00000473522 DISP2A7MBM2 1401 aa24.15■■□□□ 1.46
RPUSD3-214ENST00000473522 FAM196AQ6ZSG2 479 aa24.14■■□□□ 1.45
RPUSD3-214ENST00000473522 EXOC5O00471 708 aa24.13■■□□□ 1.45
RPUSD3-214ENST00000473522 PPM1GO15355 546 aaPredicted RBP24.13■■□□□ 1.45
RPUSD3-214ENST00000473522 IL2RBP14784 551 aa24.13■■□□□ 1.45
RPUSD3-214ENST00000473522 FAM182BQ5T319 152 aa24.13■■□□□ 1.45
RPUSD3-214ENST00000473522 KIF20BQ96Q89 1820 aa24.1■■□□□ 1.45
RPUSD3-214ENST00000473522 CC2D1BQ5T0F9 858 aaKnown RBP24.1■■□□□ 1.45
RPUSD3-214ENST00000473522 LTN1O94822 1766 aa24.08■■□□□ 1.45
RPUSD3-214ENST00000473522 MARCH10Q8NA82 808 aaPredicted RBP24.08■■□□□ 1.45
RPUSD3-214ENST00000473522 SMG6Q86US8 1419 aaKnown RBP24.08■■□□□ 1.44
RPUSD3-214ENST00000473522 EP400Q96L91 3159 aa24.07■■□□□ 1.44
RPUSD3-214ENST00000473522 EIF4A2Q14240 407 aaKnown RBP24.05■■□□□ 1.44
RPUSD3-214ENST00000473522 EYA1Q99502 592 aa24.05■■□□□ 1.44
RPUSD3-214ENST00000473522 RGPD5Q99666 1765 aa24.05■■□□□ 1.44
RPUSD3-214ENST00000473522 PEAK1Q9H792 1746 aa24.04■■□□□ 1.44
RPUSD3-214ENST00000473522 BCL9O00512 1426 aa24.03■■□□□ 1.44
RPUSD3-214ENST00000473522 MTHFSP49914 203 aa24.03■■□□□ 1.44
RPUSD3-214ENST00000473522 BRWD3Q6RI45 1802 aa24.03■■□□□ 1.44
RPUSD3-214ENST00000473522 SF3B2Q13435 895 aaKnown RBP24.02■■□□□ 1.44
RPUSD3-214ENST00000473522 USHBP1Q8N6Y0 703 aa24.02■■□□□ 1.44
RPUSD3-214ENST00000473522 PARP4Q9UKK3 1724 aaKnown RBP24.01■■□□□ 1.43
RPUSD3-214ENST00000473522 TRIM37O94972 964 aa24■■□□□ 1.43
RPUSD3-214ENST00000473522 ZCRB1Q8TBF4 217 aaKnown RBP24■■□□□ 1.43
RPUSD3-214ENST00000473522 RAPGEF4Q8WZA2 1011 aa24■■□□□ 1.43
RPUSD3-214ENST00000473522 OVOS2A0A0G2JMS6 1433 aa24■■□□□ 1.43
RPUSD3-214ENST00000473522 NCAPD2Q15021 1401 aa24■■□□□ 1.43
RPUSD3-214ENST00000473522 IL13P35225 146 aa23.99■■□□□ 1.43
RPUSD3-214ENST00000473522 TNS2Q63HR2 1409 aa23.99■■□□□ 1.43
RPUSD3-214ENST00000473522 TATP17735 454 aaPredicted RBP23.98■■□□□ 1.43
RPUSD3-214ENST00000473522 ANKRD26Q9UPS8 1709 aa23.98■■□□□ 1.43
RPUSD3-214ENST00000473522 DEFB132Q7Z7B7 95 aa23.97■■□□□ 1.43
RPUSD3-214ENST00000473522 IGSF1Q8N6C5 1336 aa23.96■■□□□ 1.43
RPUSD3-214ENST00000473522 DDX10Q13206 875 aaKnown RBP23.96■■□□□ 1.43
RPUSD3-214ENST00000473522 BAG6P46379 1132 aa23.95■■□□□ 1.42
RPUSD3-214ENST00000473522 CNGB1Q14028 1251 aaPredicted RBP23.95■■□□□ 1.42
RPUSD3-214ENST00000473522 DDX54Q8TDD1 881 aaKnown RBP23.95■■□□□ 1.42
RPUSD3-214ENST00000473522 BCL11BQ9C0K0 894 aaPredicted RBP23.95■■□□□ 1.42
RPUSD3-214ENST00000473522 MEGF6O75095 1541 aa23.94■■□□□ 1.42
RPUSD3-214ENST00000473522 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.94■■□□□ 1.42
RPUSD3-214ENST00000473522 FAM208AQ9UK61 1670 aaKnown RBP23.94■■□□□ 1.42
RPUSD3-214ENST00000473522 LRRC37A3O60309 1634 aa23.94■■□□□ 1.42
RPUSD3-214ENST00000473522 APBA3O96018 575 aa23.92■■□□□ 1.42
RPUSD3-214ENST00000473522 MAP2P11137 1827 aaKnown RBP23.91■■□□□ 1.42
RPUSD3-214ENST00000473522 PPP2R1AP30153 589 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms