RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 GIGYF1O75420 1035 aaPredicted RBP7.76□□□□□ -1.17
VPS8-220ENST00000469713 CDCA8Q53HL2 280 aa7.76□□□□□ -1.17
VPS8-220ENST00000469713 USP17L3A6NCW0 530 aa7.75□□□□□ -1.17
VPS8-220ENST00000469713 USP17L4A6NCW7 530 aa7.75□□□□□ -1.17
VPS8-220ENST00000469713 USP17L2Q6R6M4 530 aa7.75□□□□□ -1.17
VPS8-220ENST00000469713 USP17L1Q7RTZ2 530 aa7.75□□□□□ -1.17
VPS8-220ENST00000469713 TRMT44Q8IYL2 757 aaKnown RBP7.75□□□□□ -1.17
VPS8-220ENST00000469713 DEPDC4Q8N2C3 294 aa7.75□□□□□ -1.17
VPS8-220ENST00000469713 CD2BP2O95400 341 aaKnown RBP7.74□□□□□ -1.17
VPS8-220ENST00000469713 VARSP26640 1264 aaKnown RBP7.74□□□□□ -1.17
VPS8-220ENST00000469713 TSGA10IPQ3SY00 556 aa7.74□□□□□ -1.17
VPS8-220ENST00000469713 RC3H1Q5TC82 1133 aaKnown RBP7.74□□□□□ -1.17
VPS8-220ENST00000469713 PLPP7Q8NBV4 271 aa7.74□□□□□ -1.17
VPS8-220ENST00000469713 RETREG2Q8NC44 543 aa7.74□□□□□ -1.17
VPS8-220ENST00000469713 SLC19A1P41440 591 aa7.73□□□□□ -1.17
VPS8-220ENST00000469713 TRAF7Q6Q0C0 670 aa7.73□□□□□ -1.17
VPS8-220ENST00000469713 PLEKHM2Q8IWE5 1019 aa7.73□□□□□ -1.17
VPS8-220ENST00000469713 EHBP1Q8NDI1 1231 aa7.73□□□□□ -1.17
VPS8-220ENST00000469713 CCDC85AQ96PX6 553 aaPredicted RBP7.73□□□□□ -1.17
VPS8-220ENST00000469713 CHIC2Q9UKJ5 165 aa7.73□□□□□ -1.17
VPS8-220ENST00000469713 ESPNB1AK53 854 aa7.72□□□□□ -1.17
VPS8-220ENST00000469713 NCOA4Q13772 614 aa7.72□□□□□ -1.17
VPS8-220ENST00000469713 NBPF20Q3BBV1 942 aa7.72□□□□□ -1.17
VPS8-220ENST00000469713 KANK4Q5T7N3 995 aaPredicted RBP7.72□□□□□ -1.17
VPS8-220ENST00000469713 V9GY48 417 aaPredicted RBP7.72□□□□□ -1.17
VPS8-220ENST00000469713 ACIN1Q9UKV3 1341 aaKnown RBP7.72□□□□□ -1.17
VPS8-220ENST00000469713 GFRA3O60609 400 aa7.71□□□□□ -1.18
VPS8-220ENST00000469713 RAB15P59190 212 aa7.71□□□□□ -1.18
VPS8-220ENST00000469713 KCTD15Q96SI1 283 aaPredicted RBP7.71□□□□□ -1.18
VPS8-220ENST00000469713 PRKD2Q9BZL6 878 aa7.71□□□□□ -1.18
VPS8-220ENST00000469713 VRTNQ9H8Y1 702 aa7.71□□□□□ -1.18
VPS8-220ENST00000469713 CDV3Q9UKY7 258 aaKnown RBP7.71□□□□□ -1.18
VPS8-220ENST00000469713 DOLKQ9UPQ8 538 aa7.71□□□□□ -1.18
VPS8-220ENST00000469713 PDIA4P13667 645 aaKnown RBP7.7□□□□□ -1.18
VPS8-220ENST00000469713 ARID5BQ14865 1188 aa7.7□□□□□ -1.18
VPS8-220ENST00000469713 MAP7D1Q3KQU3 841 aa7.7□□□□□ -1.18
VPS8-220ENST00000469713 RNF20Q5VTR2 975 aa7.7□□□□□ -1.18
VPS8-220ENST00000469713 VASH1Q7L8A9 365 aaPredicted RBP7.7□□□□□ -1.18
VPS8-220ENST00000469713 TLL2Q9Y6L7 1015 aa7.7□□□□□ -1.18
VPS8-220ENST00000469713 ATG7O95352 703 aa7.69□□□□□ -1.18
VPS8-220ENST00000469713 OXLD1Q5BKU9 147 aa7.69□□□□□ -1.18
VPS8-220ENST00000469713 SPRYD7Q5W111 196 aa7.69□□□□□ -1.18
VPS8-220ENST00000469713 CDCA7Q9BWT1 371 aaPredicted RBP7.69□□□□□ -1.18
VPS8-220ENST00000469713 MKRN1Q9UHC7 482 aaKnown RBP7.69□□□□□ -1.18
VPS8-220ENST00000469713 MAP4K5Q9Y4K4 846 aa7.69□□□□□ -1.18
VPS8-220ENST00000469713 WNT7AO00755 349 aa7.68□□□□□ -1.18
VPS8-220ENST00000469713 NRG2O14511 850 aaPredicted RBP7.68□□□□□ -1.18
VPS8-220ENST00000469713 SIAH2O43255 324 aa7.68□□□□□ -1.18
VPS8-220ENST00000469713 LZTS3O60299 673 aaPredicted RBP7.68□□□□□ -1.18
VPS8-220ENST00000469713 EML3Q32P44 896 aa7.68□□□□□ -1.18
VPS8-220ENST00000469713 INTS6LQ5JSJ4 861 aaKnown RBP7.68□□□□□ -1.18
VPS8-220ENST00000469713 SEPT12Q8IYM1 358 aa7.68□□□□□ -1.18
VPS8-220ENST00000469713 MRGPRX2Q96LB1 330 aa7.68□□□□□ -1.18
VPS8-220ENST00000469713 CDK15Q96Q40 435 aa7.68□□□□□ -1.18
VPS8-220ENST00000469713 PCDHB11Q9Y5F2 797 aa7.68□□□□□ -1.18
VPS8-220ENST00000469713 CSB-PGBD3P0DP91 1061 aa7.67□□□□□ -1.18
VPS8-220ENST00000469713 ZNF697Q5TEC3 545 aa7.67□□□□□ -1.18
VPS8-220ENST00000469713 CARNS1A5YM72 827 aa7.66□□□□□ -1.18
VPS8-220ENST00000469713 ATP5J2-PTCD1G3V325 749 aa7.66□□□□□ -1.18
VPS8-220ENST00000469713 FSHRP23945 695 aa7.66□□□□□ -1.18
VPS8-220ENST00000469713 GRM5P41594 1212 aa7.66□□□□□ -1.18
VPS8-220ENST00000469713 CRTC2Q53ET0 693 aaPredicted RBP7.66□□□□□ -1.18
VPS8-220ENST00000469713 TRAIPQ9BWF2 469 aa7.66□□□□□ -1.18
VPS8-220ENST00000469713 NOD1Q9Y239 953 aa7.66□□□□□ -1.18
VPS8-220ENST00000469713 USP17L15C9J2P7 530 aa7.65□□□□□ -1.18
VPS8-220ENST00000469713 USP17L10C9JJH3 530 aa7.65□□□□□ -1.18
VPS8-220ENST00000469713 USP17L13C9JLJ4 530 aa7.65□□□□□ -1.18
VPS8-220ENST00000469713 USP17L12C9JPN9 530 aa7.65□□□□□ -1.18
VPS8-220ENST00000469713 USP17L11C9JVI0 530 aa7.65□□□□□ -1.18
VPS8-220ENST00000469713 USP17L21D6R901 530 aa7.65□□□□□ -1.18
VPS8-220ENST00000469713 USP17L18D6R9N7 530 aa7.65□□□□□ -1.18
VPS8-220ENST00000469713 USP17L22D6RA61 530 aa7.65□□□□□ -1.18
VPS8-220ENST00000469713 USP17L17D6RBQ6 530 aa7.65□□□□□ -1.18
VPS8-220ENST00000469713 USP17L19D6RCP7 530 aa7.65□□□□□ -1.18
VPS8-220ENST00000469713 USP17L20D6RJB6 530 aa7.65□□□□□ -1.18
VPS8-220ENST00000469713 ERVH48-1M5A8F1 160 aa7.65□□□□□ -1.18
VPS8-220ENST00000469713 RASA1P20936 1047 aa7.65□□□□□ -1.18
VPS8-220ENST00000469713 USP17L24Q0WX57 530 aa7.65□□□□□ -1.18
VPS8-220ENST00000469713 FOXC1Q12948 553 aa7.65□□□□□ -1.18
VPS8-220ENST00000469713 ZNF598Q86UK7 904 aaKnown RBP7.65□□□□□ -1.18
VPS8-220ENST00000469713 MPNDQ8N594 471 aa7.65□□□□□ -1.18
VPS8-220ENST00000469713 ZMIZ1Q9ULJ6 1067 aa7.65□□□□□ -1.18
VPS8-220ENST00000469713 FAM196BA6NMK8 535 aa7.64□□□□□ -1.19
VPS8-220ENST00000469713 CLDN10P78369 228 aa7.64□□□□□ -1.19
VPS8-220ENST00000469713 PTK7Q13308 1070 aa7.64□□□□□ -1.19
VPS8-220ENST00000469713 LARP1Q6PKG0 1096 aaKnown RBP7.64□□□□□ -1.19
VPS8-220ENST00000469713 CCDC125Q86Z20 511 aa7.64□□□□□ -1.19
VPS8-220ENST00000469713 OGFOD1Q8N543 542 aa7.64□□□□□ -1.19
VPS8-220ENST00000469713 PKD2L1Q9P0L9 805 aa7.64□□□□□ -1.19
VPS8-220ENST00000469713 NOVA2Q9UNW9 492 aaKnown RBP7.64□□□□□ -1.19
VPS8-220ENST00000469713 USTQ9Y2C2 406 aa7.64□□□□□ -1.19
VPS8-220ENST00000469713 ADH1CP00326 375 aa7.63□□□□□ -1.19
VPS8-220ENST00000469713 SCTRP47872 440 aa7.63□□□□□ -1.19
VPS8-220ENST00000469713 GTF2IP78347 998 aa7.63□□□□□ -1.19
VPS8-220ENST00000469713 ELOAQ14241 798 aaKnown RBP7.63□□□□□ -1.19
VPS8-220ENST00000469713 TRIM50Q86XT4 487 aa7.63□□□□□ -1.19
VPS8-220ENST00000469713 STK32AQ8WU08 396 aa7.63□□□□□ -1.19
VPS8-220ENST00000469713 ZNF594Q96JF6 807 aaPredicted RBP7.63□□□□□ -1.19
VPS8-220ENST00000469713 TMPRSS4Q9NRS4 437 aa7.63□□□□□ -1.19
VPS8-220ENST00000469713 DNAAF2Q9NVR5 837 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms