RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 TMC2Q8TDI7 906 aa9.59□□□□□ -0.87
SPTBN1-204ENST00000467371 DDX56Q9NY93 547 aaKnown RBP9.59□□□□□ -0.87
SPTBN1-204ENST00000467371 CARMIL1Q5VZK9 1371 aa9.59□□□□□ -0.87
SPTBN1-204ENST00000467371 NESP48681 1621 aa9.59□□□□□ -0.87
SPTBN1-204ENST00000467371 GIGYF1O75420 1035 aaPredicted RBP9.59□□□□□ -0.87
SPTBN1-204ENST00000467371 B4GALNT3Q6L9W6 998 aa9.59□□□□□ -0.87
SPTBN1-204ENST00000467371 KLF15Q9UIH9 416 aa9.59□□□□□ -0.87
SPTBN1-204ENST00000467371 SF3B2Q13435 895 aaKnown RBP9.58□□□□□ -0.88
SPTBN1-204ENST00000467371 PRDM4Q9UKN5 801 aa9.58□□□□□ -0.88
SPTBN1-204ENST00000467371 RAD54L2Q9Y4B4 1467 aa9.58□□□□□ -0.88
SPTBN1-204ENST00000467371 SVIPQ8NHG7 77 aa9.58□□□□□ -0.88
SPTBN1-204ENST00000467371 HMGXB3Q12766 1538 aa9.58□□□□□ -0.88
SPTBN1-204ENST00000467371 UBE4AQ14139 1066 aa9.57□□□□□ -0.88
SPTBN1-204ENST00000467371 ANKRD33BA6NCL7 494 aa9.57□□□□□ -0.88
SPTBN1-204ENST00000467371 BANK1Q8NDB2 785 aa9.57□□□□□ -0.88
SPTBN1-204ENST00000467371 RSPH9Q9H1X1 276 aaPredicted RBP9.57□□□□□ -0.88
SPTBN1-204ENST00000467371 PRC1O43663 620 aa9.57□□□□□ -0.88
SPTBN1-204ENST00000467371 FAM163BP0C2L3 166 aa9.57□□□□□ -0.88
SPTBN1-204ENST00000467371 GIGYF2Q6Y7W6 1299 aaKnown RBP9.57□□□□□ -0.88
SPTBN1-204ENST00000467371 TBC1D2BQ9UPU7 963 aa9.57□□□□□ -0.88
SPTBN1-204ENST00000467371 DHX8Q14562 1220 aaKnown RBP9.56□□□□□ -0.88
SPTBN1-204ENST00000467371 ANP32BQ92688 251 aaKnown RBP9.56□□□□□ -0.88
SPTBN1-204ENST00000467371 ARMC5Q96C12 935 aa9.56□□□□□ -0.88
SPTBN1-204ENST00000467371 SENP3-EIF4A1A0A087X0R7 540 aa9.56□□□□□ -0.88
SPTBN1-204ENST00000467371 MAN1A1P33908 653 aa9.56□□□□□ -0.88
SPTBN1-204ENST00000467371 MAP9Q49MG5 647 aa9.56□□□□□ -0.88
SPTBN1-204ENST00000467371 TRIM34Q9BYJ4 488 aa9.56□□□□□ -0.88
SPTBN1-204ENST00000467371 IFT57Q9NWB7 429 aa9.56□□□□□ -0.88
SPTBN1-204ENST00000467371 DMGDHQ9UI17 866 aaKnown RBP9.56□□□□□ -0.88
SPTBN1-204ENST00000467371 CTDP1Q9Y5B0 961 aaPredicted RBP9.56□□□□□ -0.88
SPTBN1-204ENST00000467371 LDLRAD1Q5T700 205 aa9.56□□□□□ -0.88
SPTBN1-204ENST00000467371 TTC30BQ8N4P2 665 aa9.56□□□□□ -0.88
SPTBN1-204ENST00000467371 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.56□□□□□ -0.88
SPTBN1-204ENST00000467371 REPIN1Q9BWE0 567 aaKnown RBP9.56□□□□□ -0.88
SPTBN1-204ENST00000467371 PRKAG2Q9UGJ0 569 aa9.56□□□□□ -0.88
SPTBN1-204ENST00000467371 SFMBT1Q9UHJ3 866 aa9.56□□□□□ -0.88
SPTBN1-204ENST00000467371 PUF60Q9UHX1 559 aaKnown RBP9.56□□□□□ -0.88
SPTBN1-204ENST00000467371 SYNPO2Q9UMS6 1093 aa9.56□□□□□ -0.88
SPTBN1-204ENST00000467371 FHOD3Q2V2M9 1422 aa9.56□□□□□ -0.88
SPTBN1-204ENST00000467371 CD53P19397 219 aa9.55□□□□□ -0.88
SPTBN1-204ENST00000467371 HSD3B2P26439 372 aa9.55□□□□□ -0.88
SPTBN1-204ENST00000467371 TSNAXIP1Q2TAA8 658 aa9.55□□□□□ -0.88
SPTBN1-204ENST00000467371 CASS4Q9NQ75 786 aa9.55□□□□□ -0.88
SPTBN1-204ENST00000467371 HSP90AA2PQ14568 343 aaPredicted RBP9.55□□□□□ -0.88
SPTBN1-204ENST00000467371 RRP7BPQ9NSQ0 103 aa9.55□□□□□ -0.88
SPTBN1-204ENST00000467371 NCKAP5LQ9HCH0 1330 aa9.55□□□□□ -0.88
SPTBN1-204ENST00000467371 FBXO31Q5XUX0 539 aaPredicted RBP9.54□□□□□ -0.88
SPTBN1-204ENST00000467371 CCNB3Q8WWL7 1395 aa9.54□□□□□ -0.88
SPTBN1-204ENST00000467371 RRBP1Q9P2E9 1410 aaKnown RBP9.54□□□□□ -0.88
SPTBN1-204ENST00000467371 COL6A1P12109 1028 aa9.54□□□□□ -0.88
SPTBN1-204ENST00000467371 IRX3P78415 501 aaPredicted RBP9.54□□□□□ -0.88
SPTBN1-204ENST00000467371 TTC39BQ5VTQ0 682 aaPredicted RBP9.54□□□□□ -0.88
SPTBN1-204ENST00000467371 U3KPZ7 1027 aaPredicted RBP9.54□□□□□ -0.88
SPTBN1-204ENST00000467371 S100BP04271 92 aaPredicted RBP9.53□□□□□ -0.88
SPTBN1-204ENST00000467371 RBL2Q08999 1139 aa9.53□□□□□ -0.88
SPTBN1-204ENST00000467371 MPNDQ8N594 471 aa9.53□□□□□ -0.88
SPTBN1-204ENST00000467371 SLC43A3Q8NBI5 491 aa9.53□□□□□ -0.88
SPTBN1-204ENST00000467371 MTMR14Q8NCE2 650 aa9.53□□□□□ -0.88
SPTBN1-204ENST00000467371 FRAT1Q92837 279 aaPredicted RBP9.53□□□□□ -0.88
SPTBN1-204ENST00000467371 PPP1R12CQ9BZL4 782 aa9.53□□□□□ -0.88
SPTBN1-204ENST00000467371 MUC3BQ9H195 1237 aa9.53□□□□□ -0.88
SPTBN1-204ENST00000467371 BICDL2A1A5D9 508 aa9.53□□□□□ -0.88
SPTBN1-204ENST00000467371 SOWAHDA6NJG2 315 aa9.53□□□□□ -0.88
SPTBN1-204ENST00000467371 C9orf131Q5VYM1 1079 aa9.53□□□□□ -0.88
SPTBN1-204ENST00000467371 IQSEC3Q9UPP2 1182 aaPredicted RBP9.53□□□□□ -0.88
SPTBN1-204ENST00000467371 TOP2BQ02880 1626 aa9.53□□□□□ -0.88
SPTBN1-204ENST00000467371 CENPJQ9HC77 1338 aaPredicted RBP9.53□□□□□ -0.88
SPTBN1-204ENST00000467371 FGD5Q6ZNL6 1462 aa9.53□□□□□ -0.88
SPTBN1-204ENST00000467371 HSP90AA1P07900 732 aaKnown RBP9.53□□□□□ -0.88
SPTBN1-204ENST00000467371 HNRNPUQ00839 825 aaKnown RBP eCLIP9.53□□□□□ -0.88
SPTBN1-204ENST00000467371 NEXNQ0ZGT2 675 aa9.53□□□□□ -0.88
SPTBN1-204ENST00000467371 TBC1D10BQ4KMP7 808 aaPredicted RBP9.53□□□□□ -0.88
SPTBN1-204ENST00000467371 NBPF10Q6P3W6 841 aaKnown RBP9.53□□□□□ -0.88
SPTBN1-204ENST00000467371 GEMIN8Q9NWZ8 242 aaKnown RBP9.53□□□□□ -0.88
SPTBN1-204ENST00000467371 TCERG1O14776 1098 aaKnown RBP9.52□□□□□ -0.89
SPTBN1-204ENST00000467371 APPP05067 770 aa9.52□□□□□ -0.89
SPTBN1-204ENST00000467371 TGFB3P10600 412 aa9.52□□□□□ -0.89
SPTBN1-204ENST00000467371 C8orf48Q96LL4 319 aa9.52□□□□□ -0.89
SPTBN1-204ENST00000467371 PRDM2Q13029 1718 aa9.52□□□□□ -0.89
SPTBN1-204ENST00000467371 TIMM44O43615 452 aa9.52□□□□□ -0.89
SPTBN1-204ENST00000467371 POU5F1BQ06416 359 aa9.52□□□□□ -0.89
SPTBN1-204ENST00000467371 RNF187Q5TA31 235 aaPredicted RBP9.52□□□□□ -0.89
SPTBN1-204ENST00000467371 NEUROD6Q96NK8 337 aa9.52□□□□□ -0.89
SPTBN1-204ENST00000467371 BACH2Q9BYV9 841 aa9.52□□□□□ -0.89
SPTBN1-204ENST00000467371 CBFA2T2O43439 604 aa9.51□□□□□ -0.89
SPTBN1-204ENST00000467371 NUBP1P53384 320 aa9.51□□□□□ -0.89
SPTBN1-204ENST00000467371 RNF123Q5XPI4 1314 aa9.51□□□□□ -0.89
SPTBN1-204ENST00000467371 RAB3GAP2Q9H2M9 1393 aa9.51□□□□□ -0.89
SPTBN1-204ENST00000467371 TTLL12Q14166 644 aaPredicted RBP9.51□□□□□ -0.89
SPTBN1-204ENST00000467371 MAPRE1Q15691 268 aaKnown RBP9.51□□□□□ -0.89
SPTBN1-204ENST00000467371 IFT122Q9HBG6 1241 aa9.51□□□□□ -0.89
SPTBN1-204ENST00000467371 MKRN1Q9UHC7 482 aaKnown RBP9.51□□□□□ -0.89
SPTBN1-204ENST00000467371 TTF2Q9UNY4 1162 aaKnown RBP9.51□□□□□ -0.89
SPTBN1-204ENST00000467371 PRXQ9BXM0 1461 aa9.51□□□□□ -0.89
SPTBN1-204ENST00000467371 ARHGAP35Q9NRY4 1499 aa9.51□□□□□ -0.89
SPTBN1-204ENST00000467371 TDO2P48775 406 aa9.51□□□□□ -0.89
SPTBN1-204ENST00000467371 DCAF11Q8TEB1 546 aa9.51□□□□□ -0.89
SPTBN1-204ENST00000467371 CAMK2BQ13554 666 aa9.5□□□□□ -0.89
SPTBN1-204ENST00000467371 HDGFL1Q5TGJ6 251 aa9.5□□□□□ -0.89
SPTBN1-204ENST00000467371 FILIP1Q7Z7B0 1213 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms