RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 TMEM63CQ9P1W3 806 aa13.55□□□□□ -0.24
SFXN3-204ENST00000466982 KCNJ4P48050 445 aa13.55□□□□□ -0.24
SFXN3-204ENST00000466982 ZBTB40Q9NUA8 1239 aa13.55□□□□□ -0.24
SFXN3-204ENST00000466982 CDC42BPBQ9Y5S2 1711 aa13.55□□□□□ -0.24
SFXN3-204ENST00000466982 PREX2Q70Z35 1606 aa13.54□□□□□ -0.24
SFXN3-204ENST00000466982 ABCA9Q8IUA7 1624 aa13.54□□□□□ -0.24
SFXN3-204ENST00000466982 IGSF3O75054 1194 aa13.54□□□□□ -0.24
SFXN3-204ENST00000466982 BMP2KLQ5H9B9 411 aa13.54□□□□□ -0.24
SFXN3-204ENST00000466982 ANKRD45Q5TZF3 282 aa13.54□□□□□ -0.24
SFXN3-204ENST00000466982 ATF7IPQ6VMQ6 1270 aa13.54□□□□□ -0.24
SFXN3-204ENST00000466982 KIF16BQ96L93 1317 aa13.54□□□□□ -0.24
SFXN3-204ENST00000466982 FOXD4L5Q5VV16 416 aaPredicted RBP13.54□□□□□ -0.24
SFXN3-204ENST00000466982 MORC1Q86VD1 984 aa13.54□□□□□ -0.24
SFXN3-204ENST00000466982 FOXD4L4Q8WXT5 416 aaPredicted RBP13.54□□□□□ -0.24
SFXN3-204ENST00000466982 GEMIN8Q9NWZ8 242 aaKnown RBP13.54□□□□□ -0.24
SFXN3-204ENST00000466982 CCDC39Q9UFE4 941 aa13.54□□□□□ -0.24
SFXN3-204ENST00000466982 IQGAP1P46940 1657 aa13.53□□□□□ -0.24
SFXN3-204ENST00000466982 IQSEC2Q5JU85 1478 aa13.53□□□□□ -0.24
SFXN3-204ENST00000466982 PTMAP06454 111 aaKnown RBP13.53□□□□□ -0.24
SFXN3-204ENST00000466982 GRIPAP1Q4V328 841 aa13.53□□□□□ -0.24
SFXN3-204ENST00000466982 ZGPATQ8N5A5 531 aaKnown RBP13.53□□□□□ -0.24
SFXN3-204ENST00000466982 SCAF11Q99590 1463 aaKnown RBP13.53□□□□□ -0.24
SFXN3-204ENST00000466982 PATL2C9JE40 543 aaKnown RBP13.53□□□□□ -0.24
SFXN3-204ENST00000466982 C17orf53Q8N3J3 647 aaPredicted RBP13.53□□□□□ -0.24
SFXN3-204ENST00000466982 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.53□□□□□ -0.24
SFXN3-204ENST00000466982 CYP2E1P05181 493 aaPredicted RBP13.52□□□□□ -0.24
SFXN3-204ENST00000466982 MYRIPQ8NFW9 859 aa13.52□□□□□ -0.24
SFXN3-204ENST00000466982 SPDYE4A6NLX3 237 aa13.52□□□□□ -0.25
SFXN3-204ENST00000466982 TRHP20396 242 aaPredicted RBP13.52□□□□□ -0.25
SFXN3-204ENST00000466982 MCM5P33992 734 aa13.52□□□□□ -0.25
SFXN3-204ENST00000466982 MTHFSP49914 203 aa13.52□□□□□ -0.25
SFXN3-204ENST00000466982 C1orf115Q9H7X2 142 aa13.52□□□□□ -0.25
SFXN3-204ENST00000466982 FANCAO15360 1455 aa13.52□□□□□ -0.25
SFXN3-204ENST00000466982 SHPRHQ149N8 1683 aa13.51□□□□□ -0.25
SFXN3-204ENST00000466982 LRSAM1Q6UWE0 723 aa13.51□□□□□ -0.25
SFXN3-204ENST00000466982 ZDHHC9Q9Y397 364 aa13.51□□□□□ -0.25
SFXN3-204ENST00000466982 SAMD9LQ8IVG5 1584 aa13.51□□□□□ -0.25
SFXN3-204ENST00000466982 CHMP4CQ96CF2 233 aa13.5□□□□□ -0.25
SFXN3-204ENST00000466982 U2AF1L5P0DN76 240 aaPredicted RBP13.49□□□□□ -0.25
SFXN3-204ENST00000466982 NUCB2P80303 420 aa13.49□□□□□ -0.25
SFXN3-204ENST00000466982 U2AF1Q01081 240 aaKnown RBP eCLIP13.49□□□□□ -0.25
SFXN3-204ENST00000466982 KIAA2012Q0VF49 1180 aa13.49□□□□□ -0.25
SFXN3-204ENST00000466982 TMED8Q6PL24 325 aaPredicted RBP13.49□□□□□ -0.25
SFXN3-204ENST00000466982 MADDQ8WXG6 1647 aa13.49□□□□□ -0.25
SFXN3-204ENST00000466982 ARHGAP31Q2M1Z3 1444 aa13.49□□□□□ -0.25
SFXN3-204ENST00000466982 CCDC27Q2M243 656 aa13.49□□□□□ -0.25
SFXN3-204ENST00000466982 SYCP2Q9BX26 1530 aa13.49□□□□□ -0.25
SFXN3-204ENST00000466982 DIP2BQ9P265 1576 aa13.49□□□□□ -0.25
SFXN3-204ENST00000466982 ZNF771Q7L3S4 317 aaPredicted RBP13.49□□□□□ -0.25
SFXN3-204ENST00000466982 AFAP1Q8N556 730 aa13.49□□□□□ -0.25
SFXN3-204ENST00000466982 KANK1Q14678 1352 aa13.48□□□□□ -0.25
SFXN3-204ENST00000466982 CEP152O94986 1710 aa13.48□□□□□ -0.25
SFXN3-204ENST00000466982 CFAP70Q5T0N1 1121 aa13.48□□□□□ -0.25
SFXN3-204ENST00000466982 SLC12A5Q9H2X9 1139 aa13.48□□□□□ -0.25
SFXN3-204ENST00000466982 FBXO3Q9UK99 471 aa13.48□□□□□ -0.25
SFXN3-204ENST00000466982 ERVK-7P63135 1459 aa13.48□□□□□ -0.25
SFXN3-204ENST00000466982 KDM5AP29375 1690 aaKnown RBP13.47□□□□□ -0.25
SFXN3-204ENST00000466982 ZBTB9Q96C00 473 aa13.46□□□□□ -0.25
SFXN3-204ENST00000466982 TTC12Q9H892 705 aaPredicted RBP13.46□□□□□ -0.25
SFXN3-204ENST00000466982 NSD3Q9BZ95 1437 aa13.46□□□□□ -0.25
SFXN3-204ENST00000466982 GLI2P10070 1586 aa13.46□□□□□ -0.26
SFXN3-204ENST00000466982 ARHGEF5Q12774 1597 aa13.46□□□□□ -0.26
SFXN3-204ENST00000466982 ADGRL1O94910 1474 aa13.46□□□□□ -0.26
SFXN3-204ENST00000466982 TRIM6-TRIM34B2RNG4 842 aa13.45□□□□□ -0.26
SFXN3-204ENST00000466982 TULP2O00295 520 aa13.45□□□□□ -0.26
SFXN3-204ENST00000466982 GSPT1P15170 499 aaKnown RBP13.45□□□□□ -0.26
SFXN3-204ENST00000466982 TRIM34Q9BYJ4 488 aa13.45□□□□□ -0.26
SFXN3-204ENST00000466982 ARAP3Q8WWN8 1544 aa13.45□□□□□ -0.26
SFXN3-204ENST00000466982 TRAPPC8Q9Y2L5 1435 aa13.45□□□□□ -0.26
SFXN3-204ENST00000466982 TSPOAP1O95153 1857 aa13.45□□□□□ -0.26
SFXN3-204ENST00000466982 UNC13BO14795 1591 aa13.45□□□□□ -0.26
SFXN3-204ENST00000466982 NOLC1Q14978 699 aaKnown RBP eCLIP13.45□□□□□ -0.26
SFXN3-204ENST00000466982 BCL2L12Q9HB09 334 aa13.45□□□□□ -0.26
SFXN3-204ENST00000466982 PPIP5K1Q6PFW1 1433 aa13.45□□□□□ -0.26
SFXN3-204ENST00000466982 RABEP1Q15276 862 aa13.44□□□□□ -0.26
SFXN3-204ENST00000466982 MAP3K4Q9Y6R4 1608 aa13.44□□□□□ -0.26
SFXN3-204ENST00000466982 CDC45O75419 566 aa13.44□□□□□ -0.26
SFXN3-204ENST00000466982 FOXD4L6Q3SYB3 417 aaPredicted RBP13.44□□□□□ -0.26
SFXN3-204ENST00000466982 FOXD4L3Q6VB84 417 aaPredicted RBP13.44□□□□□ -0.26
SFXN3-204ENST00000466982 SIRT2Q8IXJ6 389 aa13.44□□□□□ -0.26
SFXN3-204ENST00000466982 TRIM35Q9UPQ4 493 aa13.44□□□□□ -0.26
SFXN3-204ENST00000466982 CFAP74Q9C0B2 1584 aa13.44□□□□□ -0.26
SFXN3-204ENST00000466982 CCDC66A2RUB6 948 aa13.43□□□□□ -0.26
SFXN3-204ENST00000466982 RAPGEF3O95398 923 aa13.43□□□□□ -0.26
SFXN3-204ENST00000466982 CAPN2P17655 700 aa13.43□□□□□ -0.26
SFXN3-204ENST00000466982 U2AF2P26368 475 aaKnown RBP eCLIP13.43□□□□□ -0.26
SFXN3-204ENST00000466982 TIGD1Q96MW7 591 aa13.43□□□□□ -0.26
SFXN3-204ENST00000466982 CARD10Q9BWT7 1032 aa13.43□□□□□ -0.26
SFXN3-204ENST00000466982 ABCC1P33527 1531 aa13.43□□□□□ -0.26
SFXN3-204ENST00000466982 ATP10AO60312 1499 aa13.43□□□□□ -0.26
SFXN3-204ENST00000466982 PRIMPOLQ96LW4 560 aa13.43□□□□□ -0.26
SFXN3-204ENST00000466982 KIF3AQ9Y496 699 aa13.43□□□□□ -0.26
SFXN3-204ENST00000466982 NOS1P29475 1434 aa13.43□□□□□ -0.26
SFXN3-204ENST00000466982 PRR29P0C7W0 189 aa13.43□□□□□ -0.26
SFXN3-204ENST00000466982 PIBF1Q8WXW3 757 aa13.43□□□□□ -0.26
SFXN3-204ENST00000466982 IQGAP3Q86VI3 1631 aa13.42□□□□□ -0.26
SFXN3-204ENST00000466982 GTF2F1P35269 517 aaKnown RBP eCLIP13.42□□□□□ -0.26
SFXN3-204ENST00000466982 USP26Q9BXU7 913 aa13.42□□□□□ -0.26
SFXN3-204ENST00000466982 TSPYL1Q9H0U9 437 aa13.42□□□□□ -0.26
SFXN3-204ENST00000466982 SPAG9O60271 1321 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms