RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 COG3Q96JB2 828 aa13.11□□□□□ -0.31
SDCCAG3-208ENST00000466579 AXIN2Q9Y2T1 843 aa13.11□□□□□ -0.31
SDCCAG3-208ENST00000466579 THSD7AQ9UPZ6 1657 aa13.11□□□□□ -0.31
SDCCAG3-208ENST00000466579 SPATA31A1Q5TZJ5 1347 aa13.11□□□□□ -0.31
SDCCAG3-208ENST00000466579 ANKRD26Q9UPS8 1709 aa13.1□□□□□ -0.31
SDCCAG3-208ENST00000466579 CCDC7Q96M83 1385 aa13.1□□□□□ -0.31
SDCCAG3-208ENST00000466579 PANK3Q9H999 370 aa13.1□□□□□ -0.31
SDCCAG3-208ENST00000466579 BRWD3Q6RI45 1802 aa13.09□□□□□ -0.31
SDCCAG3-208ENST00000466579 GGNBP2Q9H3C7 697 aa13.09□□□□□ -0.31
SDCCAG3-208ENST00000466579 CGNL1Q0VF96 1302 aa13.09□□□□□ -0.31
SDCCAG3-208ENST00000466579 WASHC2AQ641Q2 1341 aa13.09□□□□□ -0.31
SDCCAG3-208ENST00000466579 CRB1P82279 1406 aa13.08□□□□□ -0.32
SDCCAG3-208ENST00000466579 LARP1Q6PKG0 1096 aaKnown RBP13.08□□□□□ -0.32
SDCCAG3-208ENST00000466579 POLR3GLQ9BT43 218 aa13.08□□□□□ -0.32
SDCCAG3-208ENST00000466579 WDR17Q8IZU2 1322 aa13.08□□□□□ -0.32
SDCCAG3-208ENST00000466579 NSD2O96028 1365 aa13.07□□□□□ -0.32
SDCCAG3-208ENST00000466579 BLMP54132 1417 aaPredicted RBP13.07□□□□□ -0.32
SDCCAG3-208ENST00000466579 SOX12O15370 315 aa13.07□□□□□ -0.32
SDCCAG3-208ENST00000466579 EVA1CP58658 441 aa13.07□□□□□ -0.32
SDCCAG3-208ENST00000466579 BARGINQ6ZT62 677 aa13.07□□□□□ -0.32
SDCCAG3-208ENST00000466579 IP6K1Q92551 441 aa13.07□□□□□ -0.32
SDCCAG3-208ENST00000466579 STRN4Q9NRL3 753 aa13.07□□□□□ -0.32
SDCCAG3-208ENST00000466579 THRAP3Q9Y2W1 955 aaKnown RBP13.07□□□□□ -0.32
SDCCAG3-208ENST00000466579 RTL1A6NKG5 1358 aa13.07□□□□□ -0.32
SDCCAG3-208ENST00000466579 KIF24Q5T7B8 1368 aa13.07□□□□□ -0.32
SDCCAG3-208ENST00000466579 SEPT12Q8IYM1 358 aa13.06□□□□□ -0.32
SDCCAG3-208ENST00000466579 CCDC9Q9Y3X0 531 aaKnown RBP13.06□□□□□ -0.32
SDCCAG3-208ENST00000466579 ERBB3P21860 1342 aa13.06□□□□□ -0.32
SDCCAG3-208ENST00000466579 MAP3K19Q56UN5 1328 aa13.06□□□□□ -0.32
SDCCAG3-208ENST00000466579 WNK3Q9BYP7 1800 aa13.06□□□□□ -0.32
SDCCAG3-208ENST00000466579 FAM208AQ9UK61 1670 aaKnown RBP13.05□□□□□ -0.32
SDCCAG3-208ENST00000466579 PARP4Q9UKK3 1724 aaKnown RBP13.05□□□□□ -0.32
SDCCAG3-208ENST00000466579 PER1O15534 1290 aaPredicted RBP13.05□□□□□ -0.32
SDCCAG3-208ENST00000466579 TCP11L2Q8N4U5 519 aa13.05□□□□□ -0.32
SDCCAG3-208ENST00000466579 EP400Q96L91 3159 aa13.05□□□□□ -0.32
SDCCAG3-208ENST00000466579 PEAK1Q9H792 1746 aa13.05□□□□□ -0.32
SDCCAG3-208ENST00000466579 ZBTB7CA1YPR0 619 aa13.04□□□□□ -0.32
SDCCAG3-208ENST00000466579 FAM98CQ17RN3 349 aaKnown RBP13.04□□□□□ -0.32
SDCCAG3-208ENST00000466579 CARD10Q9BWT7 1032 aa13.04□□□□□ -0.32
SDCCAG3-208ENST00000466579 FBLN1P23142 703 aa13.03□□□□□ -0.32
SDCCAG3-208ENST00000466579 HOXC9P31274 260 aa13.03□□□□□ -0.32
SDCCAG3-208ENST00000466579 ZEB1P37275 1124 aaPredicted RBP13.03□□□□□ -0.32
SDCCAG3-208ENST00000466579 AMER1Q5JTC6 1135 aaPredicted RBP13.03□□□□□ -0.32
SDCCAG3-208ENST00000466579 MAP2P11137 1827 aaKnown RBP13.03□□□□□ -0.32
SDCCAG3-208ENST00000466579 DISP2A7MBM2 1401 aa13.03□□□□□ -0.32
SDCCAG3-208ENST00000466579 NPC1L1Q9UHC9 1359 aa13.02□□□□□ -0.33
SDCCAG3-208ENST00000466579 RRS1Q15050 365 aaKnown RBP13.01□□□□□ -0.33
SDCCAG3-208ENST00000466579 TOM1L2Q6ZVM7 507 aa13.01□□□□□ -0.33
SDCCAG3-208ENST00000466579 ANKRD24Q8TF21 1146 aa13.01□□□□□ -0.33
SDCCAG3-208ENST00000466579 UPF1Q92900 1129 aaKnown RBP eCLIP13.01□□□□□ -0.33
SDCCAG3-208ENST00000466579 KNSTRNQ9Y448 316 aa13.01□□□□□ -0.33
SDCCAG3-208ENST00000466579 INSRP06213 1382 aa13.01□□□□□ -0.33
SDCCAG3-208ENST00000466579 FLT4P35916 1363 aa13.01□□□□□ -0.33
SDCCAG3-208ENST00000466579 SMG6Q86US8 1419 aaKnown RBP13.01□□□□□ -0.33
SDCCAG3-208ENST00000466579 AMPHP49418 695 aa13□□□□□ -0.33
SDCCAG3-208ENST00000466579 KRT27Q7Z3Y8 459 aa13□□□□□ -0.33
SDCCAG3-208ENST00000466579 CDCA7Q9BWT1 371 aaPredicted RBP13□□□□□ -0.33
SDCCAG3-208ENST00000466579 LRRC37A3O60309 1634 aa12.99□□□□□ -0.33
SDCCAG3-208ENST00000466579 USP35Q9P2H5 1018 aa12.99□□□□□ -0.33
SDCCAG3-208ENST00000466579 POLKQ9UBT6 870 aa12.99□□□□□ -0.33
SDCCAG3-208ENST00000466579 CSB-PGBD3P0DP91 1061 aa12.98□□□□□ -0.33
SDCCAG3-208ENST00000466579 EMILIN1Q9Y6C2 1016 aa12.98□□□□□ -0.33
SDCCAG3-208ENST00000466579 RGPD2P0DJD1 1756 aa12.98□□□□□ -0.33
SDCCAG3-208ENST00000466579 NCAPD2Q15021 1401 aa12.97□□□□□ -0.33
SDCCAG3-208ENST00000466579 HSP90AB2PQ58FF8 381 aa12.97□□□□□ -0.33
SDCCAG3-208ENST00000466579 CCDC125Q86Z20 511 aa12.96□□□□□ -0.33
SDCCAG3-208ENST00000466579 NLRP2Q9NX02 1062 aa12.96□□□□□ -0.33
SDCCAG3-208ENST00000466579 BCL9O00512 1426 aa12.96□□□□□ -0.34
SDCCAG3-208ENST00000466579 MORC1Q86VD1 984 aa12.95□□□□□ -0.34
SDCCAG3-208ENST00000466579 A0A0G2JS52 829 aa12.94□□□□□ -0.34
SDCCAG3-208ENST00000466579 MYT1Q01538 1121 aa12.94□□□□□ -0.34
SDCCAG3-208ENST00000466579 TNS2Q63HR2 1409 aa12.94□□□□□ -0.34
SDCCAG3-208ENST00000466579 IL2RBP14784 551 aa12.93□□□□□ -0.34
SDCCAG3-208ENST00000466579 PDE3BQ13370 1112 aa12.93□□□□□ -0.34
SDCCAG3-208ENST00000466579 DDB1Q16531 1140 aa12.93□□□□□ -0.34
SDCCAG3-208ENST00000466579 NBPF6Q5VWK0 638 aa12.93□□□□□ -0.34
SDCCAG3-208ENST00000466579 LTV1Q96GA3 475 aaPredicted RBP12.93□□□□□ -0.34
SDCCAG3-208ENST00000466579 NBPF4Q96M43 638 aa12.93□□□□□ -0.34
SDCCAG3-208ENST00000466579 RGPD1P0DJD0 1748 aa12.93□□□□□ -0.34
SDCCAG3-208ENST00000466579 SBF2Q86WG5 1849 aa12.92□□□□□ -0.34
SDCCAG3-208ENST00000466579 TNNT2P45379 298 aaPredicted RBP12.92□□□□□ -0.34
SDCCAG3-208ENST00000466579 FAM196AQ6ZSG2 479 aa12.92□□□□□ -0.34
SDCCAG3-208ENST00000466579 TNS1Q9HBL0 1735 aaKnown RBP12.92□□□□□ -0.34
SDCCAG3-208ENST00000466579 SHANK3Q9BYB0 1731 aa12.91□□□□□ -0.34
SDCCAG3-208ENST00000466579 OVOS2A0A0G2JMS6 1433 aa12.91□□□□□ -0.34
SDCCAG3-208ENST00000466579 MARCH10Q8NA82 808 aaPredicted RBP12.91□□□□□ -0.34
SDCCAG3-208ENST00000466579 MEGF6O75095 1541 aa12.91□□□□□ -0.34
SDCCAG3-208ENST00000466579 PLEKHG2Q9H7P9 1386 aa12.91□□□□□ -0.34
SDCCAG3-208ENST00000466579 EXOC5O00471 708 aa12.9□□□□□ -0.34
SDCCAG3-208ENST00000466579 PPM1GO15355 546 aaPredicted RBP12.9□□□□□ -0.34
SDCCAG3-208ENST00000466579 EIF4A2Q14240 407 aaKnown RBP12.9□□□□□ -0.34
SDCCAG3-208ENST00000466579 FAM182BQ5T319 152 aa12.9□□□□□ -0.34
SDCCAG3-208ENST00000466579 CC2D1BQ5T0F9 858 aaKnown RBP12.89□□□□□ -0.35
SDCCAG3-208ENST00000466579 IGSF1Q8N6C5 1336 aa12.88□□□□□ -0.35
SDCCAG3-208ENST00000466579 PKD1L3Q7Z443 1732 aa12.88□□□□□ -0.35
SDCCAG3-208ENST00000466579 EYA1Q99502 592 aa12.88□□□□□ -0.35
SDCCAG3-208ENST00000466579 COL3A1P02461 1466 aaPredicted RBP12.87□□□□□ -0.35
SDCCAG3-208ENST00000466579 MTHFSP49914 203 aa12.87□□□□□ -0.35
SDCCAG3-208ENST00000466579 IL13P35225 146 aa12.86□□□□□ -0.35
SDCCAG3-208ENST00000466579 USHBP1Q8N6Y0 703 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms