RNA–Protein interactions for RNA: ENST00000466441.5

UBP1-207, Transcript of upstream binding protein 1, humanhuman

TSL 1 (best)

Gene UBP1, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-207ENST00000466441 UCN2Q96RP3 112 aa7.91□□□□□ -1.14
UBP1-207ENST00000466441 CEP126Q9P2H0 1117 aa7.91□□□□□ -1.14
UBP1-207ENST00000466441 THOC2Q8NI27 1593 aaKnown RBP7.91□□□□□ -1.14
UBP1-207ENST00000466441 BIVM-ERCC5R4GMW8 1640 aa7.91□□□□□ -1.14
UBP1-207ENST00000466441 CEP164Q9UPV0 1460 aa7.9□□□□□ -1.14
UBP1-207ENST00000466441 RFX1P22670 979 aa7.9□□□□□ -1.14
UBP1-207ENST00000466441 SH3RF1Q7Z6J0 888 aa7.9□□□□□ -1.14
UBP1-207ENST00000466441 CCDC125Q86Z20 511 aa7.9□□□□□ -1.14
UBP1-207ENST00000466441 CDV3Q9UKY7 258 aaKnown RBP7.9□□□□□ -1.14
UBP1-207ENST00000466441 WRNQ14191 1432 aaPredicted RBP eCLIP7.89□□□□□ -1.15
UBP1-207ENST00000466441 RNF223E7ERA6 249 aa7.89□□□□□ -1.15
UBP1-207ENST00000466441 OCSTAMPQ9BR26 566 aa7.89□□□□□ -1.15
UBP1-207ENST00000466441 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.89□□□□□ -1.15
UBP1-207ENST00000466441 MAFBQ9Y5Q3 323 aaPredicted RBP7.89□□□□□ -1.15
UBP1-207ENST00000466441 TOP2BQ02880 1626 aa7.89□□□□□ -1.15
UBP1-207ENST00000466441 MAGEB6P1A0A0J9YX57 407 aa7.88□□□□□ -1.15
UBP1-207ENST00000466441 SKIP12755 728 aa7.88□□□□□ -1.15
UBP1-207ENST00000466441 RPIAP49247 311 aa7.88□□□□□ -1.15
UBP1-207ENST00000466441 MAP7D1Q3KQU3 841 aa7.88□□□□□ -1.15
UBP1-207ENST00000466441 RNF20Q5VTR2 975 aa7.88□□□□□ -1.15
UBP1-207ENST00000466441 TBC1D9Q6ZT07 1266 aa7.88□□□□□ -1.15
UBP1-207ENST00000466441 PDS5BQ9NTI5 1447 aa7.87□□□□□ -1.15
UBP1-207ENST00000466441 PPEF1O14829 653 aaPredicted RBP7.87□□□□□ -1.15
UBP1-207ENST00000466441 WNT7BP56706 349 aa7.87□□□□□ -1.15
UBP1-207ENST00000466441 LINC01559Q495D7 138 aa7.87□□□□□ -1.15
UBP1-207ENST00000466441 RNF135Q8IUD6 432 aa7.87□□□□□ -1.15
UBP1-207ENST00000466441 PLEKHM2Q8IWE5 1019 aa7.87□□□□□ -1.15
UBP1-207ENST00000466441 TRAIPQ9BWF2 469 aa7.87□□□□□ -1.15
UBP1-207ENST00000466441 VRTNQ9H8Y1 702 aa7.87□□□□□ -1.15
UBP1-207ENST00000466441 DNMBPQ6XZF7 1577 aa7.87□□□□□ -1.15
UBP1-207ENST00000466441 TOPBP1Q92547 1522 aa7.87□□□□□ -1.15
UBP1-207ENST00000466441 ERCC6Q03468 1493 aa7.87□□□□□ -1.15
UBP1-207ENST00000466441 CD2BP2O95400 341 aaKnown RBP7.86□□□□□ -1.15
UBP1-207ENST00000466441 CSB-PGBD3P0DP91 1061 aa7.86□□□□□ -1.15
UBP1-207ENST00000466441 SH3BP2P78314 561 aa7.86□□□□□ -1.15
UBP1-207ENST00000466441 SRPK2P78362 688 aaKnown RBP7.86□□□□□ -1.15
UBP1-207ENST00000466441 NBPF20Q3BBV1 942 aa7.86□□□□□ -1.15
UBP1-207ENST00000466441 ERFEQ4G0M1 354 aa7.86□□□□□ -1.15
UBP1-207ENST00000466441 IFFO2Q5TF58 517 aa7.86□□□□□ -1.15
UBP1-207ENST00000466441 PPP1R18Q6NYC8 613 aa7.86□□□□□ -1.15
UBP1-207ENST00000466441 TRIM52Q96A61 297 aa7.86□□□□□ -1.15
UBP1-207ENST00000466441 SLC10A4Q96EP9 437 aa7.86□□□□□ -1.15
UBP1-207ENST00000466441 CARD14Q9BXL6 1004 aa7.86□□□□□ -1.15
UBP1-207ENST00000466441 RUSC2Q8N2Y8 1516 aa7.86□□□□□ -1.15
UBP1-207ENST00000466441 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.85□□□□□ -1.15
UBP1-207ENST00000466441 VARSP26640 1264 aaKnown RBP7.85□□□□□ -1.15
UBP1-207ENST00000466441 TRIM32Q13049 653 aa7.85□□□□□ -1.15
UBP1-207ENST00000466441 TRMT44Q8IYL2 757 aaKnown RBP7.85□□□□□ -1.15
UBP1-207ENST00000466441 PHTF2Q8N3S3 785 aa7.85□□□□□ -1.15
UBP1-207ENST00000466441 FOXJ1Q92949 421 aa7.85□□□□□ -1.15
UBP1-207ENST00000466441 FGD5Q6ZNL6 1462 aa7.85□□□□□ -1.15
UBP1-207ENST00000466441 MRC2Q9UBG0 1479 aa7.85□□□□□ -1.15
UBP1-207ENST00000466441 RAD54L2Q9Y4B4 1467 aa7.84□□□□□ -1.15
UBP1-207ENST00000466441 USP17L3A6NCW0 530 aa7.84□□□□□ -1.15
UBP1-207ENST00000466441 USP17L4A6NCW7 530 aa7.84□□□□□ -1.15
UBP1-207ENST00000466441 USP17L5A8MUK1 530 aa7.84□□□□□ -1.15
UBP1-207ENST00000466441 ATG7O95352 703 aa7.84□□□□□ -1.15
UBP1-207ENST00000466441 USP17L2Q6R6M4 530 aa7.84□□□□□ -1.15
UBP1-207ENST00000466441 USP17L1Q7RTZ2 530 aa7.84□□□□□ -1.15
UBP1-207ENST00000466441 SEPT12Q8IYM1 358 aa7.84□□□□□ -1.15
UBP1-207ENST00000466441 FAM174AQ8TBP5 190 aa7.84□□□□□ -1.15
UBP1-207ENST00000466441 C1QTNF2Q9BXJ5 285 aa7.84□□□□□ -1.15
UBP1-207ENST00000466441 USTQ9Y2C2 406 aa7.84□□□□□ -1.15
UBP1-207ENST00000466441 WDR62O43379 1518 aa7.83□□□□□ -1.16
UBP1-207ENST00000466441 WDR97A6NE52 1622 aa7.83□□□□□ -1.16
UBP1-207ENST00000466441 PIK3CDO00329 1044 aa7.83□□□□□ -1.16
UBP1-207ENST00000466441 PLPP7Q8NBV4 271 aa7.83□□□□□ -1.16
UBP1-207ENST00000466441 RETREG2Q8NC44 543 aa7.83□□□□□ -1.16
UBP1-207ENST00000466441 CHIC2Q9UKJ5 165 aa7.83□□□□□ -1.16
UBP1-207ENST00000466441 POLA1P09884 1462 aaPredicted RBP7.82□□□□□ -1.16
UBP1-207ENST00000466441 SOGA1O94964 1423 aa7.82□□□□□ -1.16
UBP1-207ENST00000466441 EML3Q32P44 896 aa7.82□□□□□ -1.16
UBP1-207ENST00000466441 C4orf48Q5BLP8 95 aa7.82□□□□□ -1.16
UBP1-207ENST00000466441 KCTD17Q8N5Z5 321 aa7.82□□□□□ -1.16
UBP1-207ENST00000466441 SIRT1Q96EB6 747 aa7.82□□□□□ -1.16
UBP1-207ENST00000466441 ATP5J2-PTCD1G3V325 749 aa7.81□□□□□ -1.16
UBP1-207ENST00000466441 ELOAQ14241 798 aaKnown RBP7.81□□□□□ -1.16
UBP1-207ENST00000466441 KANK4Q5T7N3 995 aaPredicted RBP7.81□□□□□ -1.16
UBP1-207ENST00000466441 TRIM50Q86XT4 487 aa7.81□□□□□ -1.16
UBP1-207ENST00000466441 FAM9AQ8IZU1 332 aaPredicted RBP7.81□□□□□ -1.16
UBP1-207ENST00000466441 MAP4K5Q9Y4K4 846 aa7.81□□□□□ -1.16
UBP1-207ENST00000466441 CUX2O14529 1486 aa7.81□□□□□ -1.16
UBP1-207ENST00000466441 GIGYF1O75420 1035 aaPredicted RBP7.8□□□□□ -1.16
UBP1-207ENST00000466441 NCOA4Q13772 614 aa7.8□□□□□ -1.16
UBP1-207ENST00000466441 PLA2G2CQ5R387 149 aa7.8□□□□□ -1.16
UBP1-207ENST00000466441 LARP1Q6PKG0 1096 aaKnown RBP7.8□□□□□ -1.16
UBP1-207ENST00000466441 MKRN1Q9UHC7 482 aaKnown RBP7.8□□□□□ -1.16
UBP1-207ENST00000466441 DOLKQ9UPQ8 538 aa7.8□□□□□ -1.16
UBP1-207ENST00000466441 TARBP1Q13395 1621 aaKnown RBP7.8□□□□□ -1.16
UBP1-207ENST00000466441 ZBTB7CA1YPR0 619 aa7.79□□□□□ -1.16
UBP1-207ENST00000466441 ESPNB1AK53 854 aa7.79□□□□□ -1.16
UBP1-207ENST00000466441 PATL2C9JE40 543 aaKnown RBP7.79□□□□□ -1.16
UBP1-207ENST00000466441 ATP1A2P50993 1020 aa7.79□□□□□ -1.16
UBP1-207ENST00000466441 MPNDQ8N594 471 aa7.79□□□□□ -1.16
UBP1-207ENST00000466441 EHBP1Q8NDI1 1231 aa7.79□□□□□ -1.16
UBP1-207ENST00000466441 NOD1Q9Y239 953 aa7.79□□□□□ -1.16
UBP1-207ENST00000466441 FAM196BA6NMK8 535 aa7.78□□□□□ -1.16
UBP1-207ENST00000466441 USP4Q13107 963 aa7.78□□□□□ -1.16
UBP1-207ENST00000466441 CDCA8Q53HL2 280 aa7.78□□□□□ -1.16
UBP1-207ENST00000466441 RC3H1Q5TC82 1133 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms