RNA–Protein interactions for RNA: ENST00000466441.5

UBP1-207, Transcript of upstream binding protein 1, humanhuman

TSL 1 (best)

Gene UBP1, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-207ENST00000466441 AEBP2Q6ZN18 517 aaPredicted RBP19.16■□□□□ 0.66
UBP1-207ENST00000466441 CHIC1Q5VXU3 224 aa19.04■□□□□ 0.64
UBP1-207ENST00000466441 PHF23Q9BUL5 403 aaPredicted RBP16.71■□□□□ 0.27
UBP1-207ENST00000466441 SENP3Q9H4L4 574 aaPredicted RBP16.25■□□□□ 0.19
UBP1-207ENST00000466441 PLPPR3Q6T4P5 718 aa15.67■□□□□ 0.1
UBP1-207ENST00000466441 FOXD1Q16676 465 aa15.05■□□□□ -0
UBP1-207ENST00000466441 ADRA2BP18089 450 aa14.63□□□□□ -0.07
UBP1-207ENST00000466441 PPP6R1Q9UPN7 881 aa14.61□□□□□ -0.07
UBP1-207ENST00000466441 PIAS4Q8N2W9 510 aaPredicted RBP14.23□□□□□ -0.13
UBP1-207ENST00000466441 MSH5O43196 834 aa13.84□□□□□ -0.19
UBP1-207ENST00000466441 KCNA4P22459 653 aa13.83□□□□□ -0.2
UBP1-207ENST00000466441 PPP4R3CPQ6ZMV5 832 aa13.8□□□□□ -0.2
UBP1-207ENST00000466441 NCBP3Q53F19 620 aaKnown RBP13.65□□□□□ -0.22
UBP1-207ENST00000466441 POTEDQ86YR6 584 aa13.65□□□□□ -0.22
UBP1-207ENST00000466441 SCAF1Q9H7N4 1312 aaKnown RBP13.57□□□□□ -0.24
UBP1-207ENST00000466441 CNKSR2Q8WXI2 1034 aa13.39□□□□□ -0.27
UBP1-207ENST00000466441 NPM3O75607 178 aaKnown RBP13.33□□□□□ -0.28
UBP1-207ENST00000466441 SLC4A1APQ9BWU0 796 aaKnown RBP13.3□□□□□ -0.28
UBP1-207ENST00000466441 EHMT2Q96KQ7 1210 aa13.25□□□□□ -0.29
UBP1-207ENST00000466441 MAPK8IP2Q13387 824 aaPredicted RBP13.16□□□□□ -0.3
UBP1-207ENST00000466441 RNF216Q9NWF9 866 aaPredicted RBP13.04□□□□□ -0.32
UBP1-207ENST00000466441 DNAJC5BQ9UF47 199 aa12.99□□□□□ -0.33
UBP1-207ENST00000466441 DMRT2Q9Y5R5 561 aa12.99□□□□□ -0.33
UBP1-207ENST00000466441 CSRNP3Q8WYN3 585 aa12.95□□□□□ -0.34
UBP1-207ENST00000466441 HOXD11P31277 338 aaPredicted RBP12.87□□□□□ -0.35
UBP1-207ENST00000466441 FOXD4L1Q9NU39 408 aa12.71□□□□□ -0.37
UBP1-207ENST00000466441 ZBTB22O15209 634 aa12.68□□□□□ -0.38
UBP1-207ENST00000466441 SLC4A2P04920 1241 aa12.47□□□□□ -0.41
UBP1-207ENST00000466441 DCAF8L1A6NGE4 600 aa12.41□□□□□ -0.42
UBP1-207ENST00000466441 MYCNP04198 464 aaPredicted RBP12.37□□□□□ -0.43
UBP1-207ENST00000466441 ATXN8OSP0DMR3 200 aa12.29□□□□□ -0.44
UBP1-207ENST00000466441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.29□□□□□ -0.44
UBP1-207ENST00000466441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.18□□□□□ -0.46
UBP1-207ENST00000466441 HNRNPUL2Q1KMD3 747 aaKnown RBP12.18□□□□□ -0.46
UBP1-207ENST00000466441 SAMD1Q6SPF0 538 aaPredicted RBP12.11□□□□□ -0.47
UBP1-207ENST00000466441 U3KPZ7 1027 aaPredicted RBP12.06□□□□□ -0.48
UBP1-207ENST00000466441 APLP2Q06481 763 aa12□□□□□ -0.49
UBP1-207ENST00000466441 RNF39Q9H2S5 420 aa11.88□□□□□ -0.51
UBP1-207ENST00000466441 ATF5Q9Y2D1 282 aaPredicted RBP11.88□□□□□ -0.51
UBP1-207ENST00000466441 CACNB1Q02641 598 aaPredicted RBP11.84□□□□□ -0.51
UBP1-207ENST00000466441 ZNF219Q9P2Y4 722 aaPredicted RBP11.76□□□□□ -0.53
UBP1-207ENST00000466441 C1QBPQ07021 282 aaKnown RBP11.72□□□□□ -0.53
UBP1-207ENST00000466441 FKBP8Q14318 412 aa11.71□□□□□ -0.53
UBP1-207ENST00000466441 TRHP20396 242 aaPredicted RBP11.61□□□□□ -0.55
UBP1-207ENST00000466441 SPINK5Q9NQ38 1064 aaPredicted RBP11.6□□□□□ -0.55
UBP1-207ENST00000466441 CAPN15O75808 1086 aa11.59□□□□□ -0.55
UBP1-207ENST00000466441 FBLN2P98095 1184 aa11.52□□□□□ -0.57
UBP1-207ENST00000466441 POLA2Q14181 598 aa11.51□□□□□ -0.57
UBP1-207ENST00000466441 ZBTB12Q9Y330 459 aaPredicted RBP11.45□□□□□ -0.58
UBP1-207ENST00000466441 MKRN4PQ13434 485 aaPredicted RBP11.41□□□□□ -0.58
UBP1-207ENST00000466441 SPDYE4A6NLX3 237 aa11.4□□□□□ -0.58
UBP1-207ENST00000466441 AMER1Q5JTC6 1135 aaPredicted RBP11.37□□□□□ -0.59
UBP1-207ENST00000466441 ABCB7O75027 752 aa11.35□□□□□ -0.59
UBP1-207ENST00000466441 DSG3P32926 999 aa11.33□□□□□ -0.6
UBP1-207ENST00000466441 FBXO3Q9UK99 471 aa11.33□□□□□ -0.6
UBP1-207ENST00000466441 PROM2Q8N271 834 aa11.25□□□□□ -0.61
UBP1-207ENST00000466441 RTN4Q9NQC3 1192 aaKnown RBP11.23□□□□□ -0.61
UBP1-207ENST00000466441 SPDYE2BA6NHP3 402 aa11.13□□□□□ -0.63
UBP1-207ENST00000466441 SPDYE6P0CI01 402 aa11.13□□□□□ -0.63
UBP1-207ENST00000466441 SPDYE2Q495Y8 402 aa11.13□□□□□ -0.63
UBP1-207ENST00000466441 ZNF692Q9BU19 519 aaPredicted RBP11.11□□□□□ -0.63
UBP1-207ENST00000466441 VASPP50552 380 aaPredicted RBP11.07□□□□□ -0.64
UBP1-207ENST00000466441 OSCARQ8IYS5 282 aa11.06□□□□□ -0.64
UBP1-207ENST00000466441 SSUH2Q9Y2M2 353 aa11.03□□□□□ -0.64
UBP1-207ENST00000466441 STAG3Q9UJ98 1225 aa11□□□□□ -0.65
UBP1-207ENST00000466441 PABPN1Q86U42 306 aaKnown RBP eCLIP10.94□□□□□ -0.66
UBP1-207ENST00000466441 NISCHQ9Y2I1 1504 aa10.91□□□□□ -0.66
UBP1-207ENST00000466441 IFNLR1Q8IU57 520 aaPredicted RBP10.9□□□□□ -0.66
UBP1-207ENST00000466441 RBM42Q9BTD8 480 aaKnown RBP10.86□□□□□ -0.67
UBP1-207ENST00000466441 KLHL34Q8N239 644 aa10.83□□□□□ -0.68
UBP1-207ENST00000466441 PLCD3Q8N3E9 789 aa10.83□□□□□ -0.68
UBP1-207ENST00000466441 PLEKHG5O94827 1062 aa10.81□□□□□ -0.68
UBP1-207ENST00000466441 MIER1Q8N108 512 aa10.8□□□□□ -0.68
UBP1-207ENST00000466441 SPOCK2Q92563 424 aa10.79□□□□□ -0.68
UBP1-207ENST00000466441 SLC24A1O60721 1099 aa10.78□□□□□ -0.68
UBP1-207ENST00000466441 AKT1S1Q96B36 256 aa10.77□□□□□ -0.69
UBP1-207ENST00000466441 ZBTB47Q9UFB7 747 aaPredicted RBP10.77□□□□□ -0.69
UBP1-207ENST00000466441 SPDYE1Q8NFV5 336 aaPredicted RBP10.72□□□□□ -0.69
UBP1-207ENST00000466441 PKD2Q13563 968 aa10.67□□□□□ -0.7
UBP1-207ENST00000466441 POTEHQ6S545 545 aa10.66□□□□□ -0.7
UBP1-207ENST00000466441 REM2Q8IYK8 340 aaPredicted RBP10.61□□□□□ -0.71
UBP1-207ENST00000466441 DCAF8L2P0C7V8 631 aa10.6□□□□□ -0.71
UBP1-207ENST00000466441 CLEC11AQ9Y240 323 aa10.6□□□□□ -0.71
UBP1-207ENST00000466441 ECM2O94769 699 aaPredicted RBP10.59□□□□□ -0.71
UBP1-207ENST00000466441 PRR29P0C7W0 189 aa10.59□□□□□ -0.71
UBP1-207ENST00000466441 TRIM41Q8WV44 630 aa10.55□□□□□ -0.72
UBP1-207ENST00000466441 CIZ1Q9ULV3 898 aaPredicted RBP10.54□□□□□ -0.72
UBP1-207ENST00000466441 GSE1Q14687 1217 aa10.51□□□□□ -0.73
UBP1-207ENST00000466441 CREBZFQ9NS37 354 aa10.48□□□□□ -0.73
UBP1-207ENST00000466441 PITPNM1O00562 1244 aa10.47□□□□□ -0.73
UBP1-207ENST00000466441 PLCB2Q00722 1185 aa10.47□□□□□ -0.73
UBP1-207ENST00000466441 NUBP1P53384 320 aa10.44□□□□□ -0.74
UBP1-207ENST00000466441 NPM1P06748 294 aaKnown RBP eCLIP10.43□□□□□ -0.74
UBP1-207ENST00000466441 RGL2O15211 777 aa10.42□□□□□ -0.74
UBP1-207ENST00000466441 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.42□□□□□ -0.74
UBP1-207ENST00000466441 DCAF8Q5TAQ9 597 aa10.41□□□□□ -0.74
UBP1-207ENST00000466441 BBXQ8WY36 941 aaPredicted RBP10.41□□□□□ -0.74
UBP1-207ENST00000466441 FAM212AQ96EL1 285 aa10.41□□□□□ -0.74
UBP1-207ENST00000466441 MNX1P50219 401 aaPredicted RBP10.39□□□□□ -0.75
UBP1-207ENST00000466441 TAOK2Q9UL54 1235 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms