RNA–Protein interactions for RNA: ENST00000466396.5

CLTA-206, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-206ENST00000466396 WASHC2AQ641Q2 1341 aa31.68■■■□□ 2.66
CLTA-206ENST00000466396 SPATA31A7Q8IWB4 1347 aa31.68■■■□□ 2.66
CLTA-206ENST00000466396 LTN1O94822 1766 aa31.68■■■□□ 2.66
CLTA-206ENST00000466396 CCDC7Q96M83 1385 aa31.68■■■□□ 2.66
CLTA-206ENST00000466396 FBLN1P23142 703 aa31.67■■■□□ 2.66
CLTA-206ENST00000466396 LARP1Q6PKG0 1096 aaKnown RBP31.65■■■□□ 2.66
CLTA-206ENST00000466396 EVA1CP58658 441 aa31.64■■■□□ 2.66
CLTA-206ENST00000466396 ONECUT3O60422 494 aaPredicted RBP31.63■■■□□ 2.65
CLTA-206ENST00000466396 SPATA31A1Q5TZJ5 1347 aa31.63■■■□□ 2.65
CLTA-206ENST00000466396 ABCC6O95255 1503 aa31.62■■■□□ 2.65
CLTA-206ENST00000466396 CGNL1Q0VF96 1302 aa31.62■■■□□ 2.65
CLTA-206ENST00000466396 MAP3K19Q56UN5 1328 aa31.58■■■□□ 2.65
CLTA-206ENST00000466396 FAM98CQ17RN3 349 aaKnown RBP31.58■■■□□ 2.65
CLTA-206ENST00000466396 BRWD3Q6RI45 1802 aa31.56■■■□□ 2.64
CLTA-206ENST00000466396 SEPT12Q8IYM1 358 aa31.56■■■□□ 2.64
CLTA-206ENST00000466396 ANKRD26Q9UPS8 1709 aa31.55■■■□□ 2.64
CLTA-206ENST00000466396 CRB1P82279 1406 aa31.55■■■□□ 2.64
CLTA-206ENST00000466396 WDR17Q8IZU2 1322 aa31.54■■■□□ 2.64
CLTA-206ENST00000466396 RRS1Q15050 365 aaKnown RBP31.54■■■□□ 2.64
CLTA-206ENST00000466396 IP6K1Q92551 441 aa31.54■■■□□ 2.64
CLTA-206ENST00000466396 USP35Q9P2H5 1018 aa31.54■■■□□ 2.64
CLTA-206ENST00000466396 THSD7AQ9UPZ6 1657 aa31.54■■■□□ 2.64
CLTA-206ENST00000466396 PER1O15534 1290 aaPredicted RBP31.52■■■□□ 2.64
CLTA-206ENST00000466396 ZEB1P37275 1124 aaPredicted RBP31.51■■■□□ 2.63
CLTA-206ENST00000466396 HOXC9P31274 260 aa31.5■■■□□ 2.63
CLTA-206ENST00000466396 TCP11L2Q8N4U5 519 aa31.5■■■□□ 2.63
CLTA-206ENST00000466396 ERBB3P21860 1342 aa31.49■■■□□ 2.63
CLTA-206ENST00000466396 PEAK1Q9H792 1746 aa31.49■■■□□ 2.63
CLTA-206ENST00000466396 BARGINQ6ZT62 677 aa31.49■■■□□ 2.63
CLTA-206ENST00000466396 TOM1L2Q6ZVM7 507 aa31.49■■■□□ 2.63
CLTA-206ENST00000466396 KNSTRNQ9Y448 316 aa31.49■■■□□ 2.63
CLTA-206ENST00000466396 BLMP54132 1417 aaPredicted RBP31.49■■■□□ 2.63
CLTA-206ENST00000466396 AMER1Q5JTC6 1135 aaPredicted RBP31.48■■■□□ 2.63
CLTA-206ENST00000466396 ANKRD24Q8TF21 1146 aa31.47■■■□□ 2.63
CLTA-206ENST00000466396 NSD2O96028 1365 aa31.46■■■□□ 2.63
CLTA-206ENST00000466396 CSB-PGBD3P0DP91 1061 aa31.46■■■□□ 2.63
CLTA-206ENST00000466396 AMPHP49418 695 aa31.46■■■□□ 2.63
CLTA-206ENST00000466396 THRAP3Q9Y2W1 955 aaKnown RBP31.46■■■□□ 2.63
CLTA-206ENST00000466396 CARD10Q9BWT7 1032 aa31.45■■■□□ 2.63
CLTA-206ENST00000466396 MAP2P11137 1827 aaKnown RBP31.45■■■□□ 2.62
CLTA-206ENST00000466396 RTL1A6NKG5 1358 aa31.44■■■□□ 2.62
CLTA-206ENST00000466396 A0A0G2JS52 829 aa31.44■■■□□ 2.62
CLTA-206ENST00000466396 MYT1Q01538 1121 aa31.44■■■□□ 2.62
CLTA-206ENST00000466396 EMILIN1Q9Y6C2 1016 aa31.44■■■□□ 2.62
CLTA-206ENST00000466396 WNK3Q9BYP7 1800 aa31.41■■■□□ 2.62
CLTA-206ENST00000466396 TNNT2P45379 298 aaPredicted RBP31.41■■■□□ 2.62
CLTA-206ENST00000466396 UPF1Q92900 1129 aaKnown RBP eCLIP31.41■■■□□ 2.62
CLTA-206ENST00000466396 KRT27Q7Z3Y8 459 aa31.4■■■□□ 2.62
CLTA-206ENST00000466396 LTV1Q96GA3 475 aaPredicted RBP31.4■■■□□ 2.62
CLTA-206ENST00000466396 POLKQ9UBT6 870 aa31.4■■■□□ 2.62
CLTA-206ENST00000466396 HSP90AB2PQ58FF8 381 aa31.39■■■□□ 2.62
CLTA-206ENST00000466396 KIF24Q5T7B8 1368 aa31.39■■■□□ 2.62
CLTA-206ENST00000466396 PARP4Q9UKK3 1724 aaKnown RBP31.38■■■□□ 2.61
CLTA-206ENST00000466396 NLRP2Q9NX02 1062 aa31.38■■■□□ 2.61
CLTA-206ENST00000466396 FLT4P35916 1363 aa31.38■■■□□ 2.61
CLTA-206ENST00000466396 RGPD2P0DJD1 1756 aa31.38■■■□□ 2.61
CLTA-206ENST00000466396 MORC1Q86VD1 984 aa31.37■■■□□ 2.61
CLTA-206ENST00000466396 INSRP06213 1382 aa31.37■■■□□ 2.61
CLTA-206ENST00000466396 DISP2A7MBM2 1401 aa31.37■■■□□ 2.61
CLTA-206ENST00000466396 FAM208AQ9UK61 1670 aaKnown RBP31.36■■■□□ 2.61
CLTA-206ENST00000466396 EP400Q96L91 3159 aa31.36■■■□□ 2.61
CLTA-206ENST00000466396 PPM1GO15355 546 aaPredicted RBP31.33■■■□□ 2.61
CLTA-206ENST00000466396 CC2D1BQ5T0F9 858 aaKnown RBP31.33■■■□□ 2.61
CLTA-206ENST00000466396 FAM182BQ5T319 152 aa31.33■■■□□ 2.61
CLTA-206ENST00000466396 LRRC37A3O60309 1634 aa31.33■■■□□ 2.61
CLTA-206ENST00000466396 NPC1L1Q9UHC9 1359 aa31.32■■■□□ 2.6
CLTA-206ENST00000466396 SMG6Q86US8 1419 aaKnown RBP31.3■■■□□ 2.6
CLTA-206ENST00000466396 NBPF6Q5VWK0 638 aa31.29■■■□□ 2.6
CLTA-206ENST00000466396 NBPF4Q96M43 638 aa31.29■■■□□ 2.6
CLTA-206ENST00000466396 CDCA7Q9BWT1 371 aaPredicted RBP31.28■■■□□ 2.6
CLTA-206ENST00000466396 PDE3BQ13370 1112 aa31.25■■■□□ 2.59
CLTA-206ENST00000466396 DDB1Q16531 1140 aa31.25■■■□□ 2.59
CLTA-206ENST00000466396 CNGB1Q14028 1251 aaPredicted RBP31.24■■■□□ 2.59
CLTA-206ENST00000466396 IL2RBP14784 551 aa31.23■■■□□ 2.59
CLTA-206ENST00000466396 USHBP1Q8N6Y0 703 aa31.23■■■□□ 2.59
CLTA-206ENST00000466396 EIF4A2Q14240 407 aaKnown RBP31.2■■■□□ 2.59
CLTA-206ENST00000466396 TNS2Q63HR2 1409 aa31.19■■■□□ 2.58
CLTA-206ENST00000466396 EXOC5O00471 708 aa31.19■■■□□ 2.58
CLTA-206ENST00000466396 MARCH10Q8NA82 808 aaPredicted RBP31.19■■■□□ 2.58
CLTA-206ENST00000466396 NCAPD2Q15021 1401 aa31.18■■■□□ 2.58
CLTA-206ENST00000466396 MEGF6O75095 1541 aa31.18■■■□□ 2.58
CLTA-206ENST00000466396 FAM196AQ6ZSG2 479 aa31.17■■■□□ 2.58
CLTA-206ENST00000466396 EYA1Q99502 592 aa31.17■■■□□ 2.58
CLTA-206ENST00000466396 MTHFSP49914 203 aa31.16■■■□□ 2.58
CLTA-206ENST00000466396 DDX10Q13206 875 aaKnown RBP31.15■■■□□ 2.58
CLTA-206ENST00000466396 CCDC125Q86Z20 511 aa31.15■■■□□ 2.58
CLTA-206ENST00000466396 OVOS2A0A0G2JMS6 1433 aa31.12■■■□□ 2.57
CLTA-206ENST00000466396 SHANK3Q9BYB0 1731 aa31.11■■■□□ 2.57
CLTA-206ENST00000466396 TNS1Q9HBL0 1735 aaKnown RBP31.1■■■□□ 2.57
CLTA-206ENST00000466396 SBF2Q86WG5 1849 aa31.1■■■□□ 2.57
CLTA-206ENST00000466396 RGPD1P0DJD0 1748 aa31.1■■■□□ 2.57
CLTA-206ENST00000466396 TRIM37O94972 964 aa31.09■■■□□ 2.57
CLTA-206ENST00000466396 BCL9O00512 1426 aa31.08■■■□□ 2.57
CLTA-206ENST00000466396 IGSF1Q8N6C5 1336 aa31.08■■■□□ 2.57
CLTA-206ENST00000466396 IL13P35225 146 aa31.08■■■□□ 2.57
CLTA-206ENST00000466396 RAPGEF4Q8WZA2 1011 aa31.07■■■□□ 2.56
CLTA-206ENST00000466396 DEFB132Q7Z7B7 95 aa31.05■■■□□ 2.56
CLTA-206ENST00000466396 ZCRB1Q8TBF4 217 aaKnown RBP31.05■■■□□ 2.56
CLTA-206ENST00000466396 TATP17735 454 aaPredicted RBP31.04■■■□□ 2.56
CLTA-206ENST00000466396 COL3A1P02461 1466 aaPredicted RBP31.03■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms