RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 GRM5P41594 1212 aa5.94□□□□□ -1.46
CCDC93-205ENST00000466171 KRT76Q01546 638 aa5.94□□□□□ -1.46
CCDC93-205ENST00000466171 TRMT44Q8IYL2 757 aaKnown RBP5.94□□□□□ -1.46
CCDC93-205ENST00000466171 LINC00528Q8N1L1 170 aa5.94□□□□□ -1.46
CCDC93-205ENST00000466171 C1QTNF2Q9BXJ5 285 aa5.94□□□□□ -1.46
CCDC93-205ENST00000466171 ATP1B4Q9UN42 357 aaPredicted RBP5.94□□□□□ -1.46
CCDC93-205ENST00000466171 RTL5Q5HYW3 569 aaPredicted RBP5.93□□□□□ -1.46
CCDC93-205ENST00000466171 SH3BP5LQ7L8J4 393 aa5.93□□□□□ -1.46
CCDC93-205ENST00000466171 SH3RF1Q7Z6J0 888 aa5.93□□□□□ -1.46
CCDC93-205ENST00000466171 CCDC116Q8IYX3 515 aa5.93□□□□□ -1.46
CCDC93-205ENST00000466171 MEIOBQ8N635 442 aa5.93□□□□□ -1.46
CCDC93-205ENST00000466171 TSEN34Q9BSV6 310 aaKnown RBP5.93□□□□□ -1.46
CCDC93-205ENST00000466171 POLR3EQ9NVU0 708 aa5.93□□□□□ -1.46
CCDC93-205ENST00000466171 PGPEP1Q9NXJ5 209 aa5.93□□□□□ -1.46
CCDC93-205ENST00000466171 CDV3Q9UKY7 258 aaKnown RBP5.93□□□□□ -1.46
CCDC93-205ENST00000466171 ADAM23O75077 832 aa5.92□□□□□ -1.46
CCDC93-205ENST00000466171 CARD14Q9BXL6 1004 aa5.92□□□□□ -1.46
CCDC93-205ENST00000466171 PDXDC2PQ6P474 469 aa5.91□□□□□ -1.46
CCDC93-205ENST00000466171 ARHGAP9Q9BRR9 750 aa5.91□□□□□ -1.46
CCDC93-205ENST00000466171 IRS1P35568 1242 aa5.9□□□□□ -1.46
CCDC93-205ENST00000466171 DHX9Q08211 1270 aaKnown RBP5.9□□□□□ -1.46
CCDC93-205ENST00000466171 ZBTB33Q86T24 672 aa5.9□□□□□ -1.46
CCDC93-205ENST00000466171 PNMA1Q8ND90 353 aa5.9□□□□□ -1.46
CCDC93-205ENST00000466171 SLC10A4Q96EP9 437 aa5.9□□□□□ -1.46
CCDC93-205ENST00000466171 ZC3H4Q9UPT8 1303 aaKnown RBP5.9□□□□□ -1.47
CCDC93-205ENST00000466171 PPFIA3O75145 1194 aa5.89□□□□□ -1.47
CCDC93-205ENST00000466171 FOXK2Q01167 660 aa5.89□□□□□ -1.47
CCDC93-205ENST00000466171 CTDSPL2Q05D32 466 aa5.89□□□□□ -1.47
CCDC93-205ENST00000466171 SKIV2LQ15477 1246 aaKnown RBP5.89□□□□□ -1.47
CCDC93-205ENST00000466171 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.89□□□□□ -1.47
CCDC93-205ENST00000466171 ERFEQ4G0M1 354 aa5.89□□□□□ -1.47
CCDC93-205ENST00000466171 ZNF385CQ66K41 422 aaPredicted RBP5.89□□□□□ -1.47
CCDC93-205ENST00000466171 FKBPLQ9UIM3 349 aa5.89□□□□□ -1.47
CCDC93-205ENST00000466171 SOS2Q07890 1332 aaPredicted RBP5.89□□□□□ -1.47
CCDC93-205ENST00000466171 TTLL8A6PVC2 850 aa5.88□□□□□ -1.47
CCDC93-205ENST00000466171 PPP1R26Q5T8A7 1209 aaPredicted RBP5.88□□□□□ -1.47
CCDC93-205ENST00000466171 DDRGK1Q96HY6 314 aa5.88□□□□□ -1.47
CCDC93-205ENST00000466171 PTK2Q05397 1052 aa5.87□□□□□ -1.47
CCDC93-205ENST00000466171 SH3D19Q5HYK7 790 aa5.87□□□□□ -1.47
CCDC93-205ENST00000466171 TRIM52Q96A61 297 aa5.87□□□□□ -1.47
CCDC93-205ENST00000466171 KCTD15Q96SI1 283 aaPredicted RBP5.87□□□□□ -1.47
CCDC93-205ENST00000466171 DNMT3LQ9UJW3 386 aa5.87□□□□□ -1.47
CCDC93-205ENST00000466171 GPR161Q8N6U8 529 aaKnown RBP5.86□□□□□ -1.47
CCDC93-205ENST00000466171 CNTNAP3BQ96NU0 1288 aa5.86□□□□□ -1.47
CCDC93-205ENST00000466171 CNTNAP3Q9BZ76 1288 aa5.86□□□□□ -1.47
CCDC93-205ENST00000466171 GPSM3Q9Y4H4 160 aa5.86□□□□□ -1.47
CCDC93-205ENST00000466171 NR6A1Q15406 480 aa5.85□□□□□ -1.47
CCDC93-205ENST00000466171 NBPF20Q3BBV1 942 aa5.85□□□□□ -1.47
CCDC93-205ENST00000466171 Q6ZVU0 165 aa5.85□□□□□ -1.47
CCDC93-205ENST00000466171 SVOPQ8N4V2 548 aa5.85□□□□□ -1.47
CCDC93-205ENST00000466171 LRRN4Q8WUT4 740 aa5.85□□□□□ -1.47
CCDC93-205ENST00000466171 FIGNL2A6NMB9 653 aa5.84□□□□□ -1.47
CCDC93-205ENST00000466171 SPINT1O43278 529 aa5.84□□□□□ -1.47
CCDC93-205ENST00000466171 AP1G2O75843 785 aa5.84□□□□□ -1.47
CCDC93-205ENST00000466171 PTSQ03393 145 aa5.84□□□□□ -1.47
CCDC93-205ENST00000466171 CBLBQ13191 982 aa5.84□□□□□ -1.47
CCDC93-205ENST00000466171 PPP2R2DQ66LE6 453 aa5.84□□□□□ -1.47
CCDC93-205ENST00000466171 KANK3Q6NY19 840 aa5.84□□□□□ -1.47
CCDC93-205ENST00000466171 WHAMMQ8TF30 809 aa5.84□□□□□ -1.47
CCDC93-205ENST00000466171 ARHGEF15O94989 841 aa5.83□□□□□ -1.48
CCDC93-205ENST00000466171 ITGB2P05107 769 aa5.83□□□□□ -1.48
CCDC93-205ENST00000466171 Q8N3U1 123 aa5.83□□□□□ -1.48
CCDC93-205ENST00000466171 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.83□□□□□ -1.48
CCDC93-205ENST00000466171 KDM4CQ9H3R0 1056 aa5.83□□□□□ -1.48
CCDC93-205ENST00000466171 INTS6LQ5JSJ4 861 aaKnown RBP5.82□□□□□ -1.48
CCDC93-205ENST00000466171 DZIP3Q86Y13 1208 aaKnown RBP5.82□□□□□ -1.48
CCDC93-205ENST00000466171 PROCA1Q8NCQ7 364 aaPredicted RBP5.82□□□□□ -1.48
CCDC93-205ENST00000466171 ADAM32Q8TC27 787 aa5.82□□□□□ -1.48
CCDC93-205ENST00000466171 RELBQ01201 579 aa5.81□□□□□ -1.48
CCDC93-205ENST00000466171 PLA2G4EQ3MJ16 856 aa5.81□□□□□ -1.48
CCDC93-205ENST00000466171 RNFT1Q5M7Z0 435 aa5.81□□□□□ -1.48
CCDC93-205ENST00000466171 LCE3BQ5TA77 95 aa5.81□□□□□ -1.48
CCDC93-205ENST00000466171 CCDC155Q8N6L0 562 aa5.81□□□□□ -1.48
CCDC93-205ENST00000466171 SPOCK3Q9BQ16 436 aa5.81□□□□□ -1.48
CCDC93-205ENST00000466171 GPBP1L1Q9HC44 474 aaPredicted RBP5.81□□□□□ -1.48
CCDC93-205ENST00000466171 POLMQ9NP87 494 aaPredicted RBP5.81□□□□□ -1.48
CCDC93-205ENST00000466171 RAB15P59190 212 aa5.8□□□□□ -1.48
CCDC93-205ENST00000466171 NANOS1Q8WY41 292 aaKnown RBP5.8□□□□□ -1.48
CCDC93-205ENST00000466171 COL25A1Q9BXS0 654 aaPredicted RBP5.8□□□□□ -1.48
CCDC93-205ENST00000466171 FAM117AQ9C073 453 aa5.8□□□□□ -1.48
CCDC93-205ENST00000466171 CDC14CA4D256 554 aa5.79□□□□□ -1.48
CCDC93-205ENST00000466171 SLC35F4A4IF30 521 aa5.79□□□□□ -1.48
CCDC93-205ENST00000466171 MSTNO14793 375 aa5.79□□□□□ -1.48
CCDC93-205ENST00000466171 PROCP04070 461 aa5.79□□□□□ -1.48
CCDC93-205ENST00000466171 USP17L8P0C7I0 530 aa5.79□□□□□ -1.48
CCDC93-205ENST00000466171 SV2AQ7L0J3 742 aa5.79□□□□□ -1.48
CCDC93-205ENST00000466171 AGBL1Q96MI9 1066 aa5.79□□□□□ -1.48
CCDC93-205ENST00000466171 INSM2Q96T92 566 aaPredicted RBP5.79□□□□□ -1.48
CCDC93-205ENST00000466171 ADH1AP07327 375 aa5.78□□□□□ -1.48
CCDC93-205ENST00000466171 SLURP2P0DP57 97 aa5.78□□□□□ -1.48
CCDC93-205ENST00000466171 CTSOP43234 321 aaPredicted RBP5.78□□□□□ -1.48
CCDC93-205ENST00000466171 SEPT12Q8IYM1 358 aa5.78□□□□□ -1.48
CCDC93-205ENST00000466171 BCANQ96GW7 911 aa5.78□□□□□ -1.48
CCDC93-205ENST00000466171 KRTAP4-12Q9BQ66 201 aa5.78□□□□□ -1.48
CCDC93-205ENST00000466171 ITGA6P23229 1130 aa5.77□□□□□ -1.49
CCDC93-205ENST00000466171 VWA5B2Q8N398 1253 aa5.77□□□□□ -1.49
CCDC93-205ENST00000466171 ZNF784Q8NCA9 323 aaPredicted RBP5.77□□□□□ -1.49
CCDC93-205ENST00000466171 PCMTD1Q96MG8 357 aaPredicted RBP5.77□□□□□ -1.49
CCDC93-205ENST00000466171 ZNF395Q9H8N7 513 aaPredicted RBP5.77□□□□□ -1.49
CCDC93-205ENST00000466171 TMPRSS4Q9NRS4 437 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms