RNA–Protein interactions for RNA: ENST00000466072.5

PCCB-207, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,844 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-207ENST00000466072 SPATA31A5Q5VU36 1347 aa24.32■■□□□ 1.48
PCCB-207ENST00000466072 SPATA31A7Q8IWB4 1347 aa24.32■■□□□ 1.48
PCCB-207ENST00000466072 COG3Q96JB2 828 aa24.32■■□□□ 1.48
PCCB-207ENST00000466072 COL18A1P39060 1754 aa24.32■■□□□ 1.48
PCCB-207ENST00000466072 USP35Q9P2H5 1018 aa24.31■■□□□ 1.48
PCCB-207ENST00000466072 FAM98CQ17RN3 349 aaKnown RBP24.31■■□□□ 1.48
PCCB-207ENST00000466072 COL5A2P05997 1499 aaPredicted RBP24.3■■□□□ 1.48
PCCB-207ENST00000466072 SPATA31A1Q5TZJ5 1347 aa24.28■■□□□ 1.48
PCCB-207ENST00000466072 SEPT12Q8IYM1 358 aa24.28■■□□□ 1.48
PCCB-207ENST00000466072 ONECUT3O60422 494 aaPredicted RBP24.27■■□□□ 1.48
PCCB-207ENST00000466072 WASHC2AQ641Q2 1341 aa24.27■■□□□ 1.48
PCCB-207ENST00000466072 RGPD5Q99666 1765 aa24.25■■□□□ 1.47
PCCB-207ENST00000466072 RRS1Q15050 365 aaKnown RBP24.24■■□□□ 1.47
PCCB-207ENST00000466072 MAP3K19Q56UN5 1328 aa24.24■■□□□ 1.47
PCCB-207ENST00000466072 CCDC7Q96M83 1385 aa24.24■■□□□ 1.47
PCCB-207ENST00000466072 A0A0G2JS52 829 aa24.23■■□□□ 1.47
PCCB-207ENST00000466072 MYT1Q01538 1121 aa24.23■■□□□ 1.47
PCCB-207ENST00000466072 KIF20BQ96Q89 1820 aa24.22■■□□□ 1.47
PCCB-207ENST00000466072 LTN1O94822 1766 aa24.22■■□□□ 1.47
PCCB-207ENST00000466072 CGNL1Q0VF96 1302 aa24.21■■□□□ 1.47
PCCB-207ENST00000466072 TOM1L2Q6ZVM7 507 aa24.21■■□□□ 1.47
PCCB-207ENST00000466072 WDR17Q8IZU2 1322 aa24.2■■□□□ 1.46
PCCB-207ENST00000466072 EP400Q96L91 3159 aa24.2■■□□□ 1.46
PCCB-207ENST00000466072 CRB1P82279 1406 aa24.2■■□□□ 1.46
PCCB-207ENST00000466072 BRWD3Q6RI45 1802 aa24.19■■□□□ 1.46
PCCB-207ENST00000466072 CSB-PGBD3P0DP91 1061 aa24.19■■□□□ 1.46
PCCB-207ENST00000466072 TCP11L2Q8N4U5 519 aa24.19■■□□□ 1.46
PCCB-207ENST00000466072 IP6K1Q92551 441 aa24.19■■□□□ 1.46
PCCB-207ENST00000466072 UPF1Q92900 1129 aaKnown RBP eCLIP24.19■■□□□ 1.46
PCCB-207ENST00000466072 FAM182BQ5T319 152 aa24.18■■□□□ 1.46
PCCB-207ENST00000466072 LTV1Q96GA3 475 aaPredicted RBP24.17■■□□□ 1.46
PCCB-207ENST00000466072 HOXC9P31274 260 aa24.17■■□□□ 1.46
PCCB-207ENST00000466072 TNNT2P45379 298 aaPredicted RBP24.17■■□□□ 1.46
PCCB-207ENST00000466072 ANKRD24Q8TF21 1146 aa24.17■■□□□ 1.46
PCCB-207ENST00000466072 ERBB3P21860 1342 aa24.16■■□□□ 1.46
PCCB-207ENST00000466072 AMPHP49418 695 aa24.16■■□□□ 1.46
PCCB-207ENST00000466072 BARGINQ6ZT62 677 aa24.16■■□□□ 1.46
PCCB-207ENST00000466072 KRT27Q7Z3Y8 459 aa24.15■■□□□ 1.46
PCCB-207ENST00000466072 EMILIN1Q9Y6C2 1016 aa24.15■■□□□ 1.46
PCCB-207ENST00000466072 THSD7AQ9UPZ6 1657 aa24.15■■□□□ 1.46
PCCB-207ENST00000466072 PER1O15534 1290 aaPredicted RBP24.14■■□□□ 1.46
PCCB-207ENST00000466072 ABCC6O95255 1503 aa24.14■■□□□ 1.45
PCCB-207ENST00000466072 KNSTRNQ9Y448 316 aa24.13■■□□□ 1.45
PCCB-207ENST00000466072 CARD10Q9BWT7 1032 aa24.12■■□□□ 1.45
PCCB-207ENST00000466072 HSP90AB2PQ58FF8 381 aa24.12■■□□□ 1.45
PCCB-207ENST00000466072 AMER1Q5JTC6 1135 aaPredicted RBP24.12■■□□□ 1.45
PCCB-207ENST00000466072 NLRP2Q9NX02 1062 aa24.12■■□□□ 1.45
PCCB-207ENST00000466072 THRAP3Q9Y2W1 955 aaKnown RBP24.12■■□□□ 1.45
PCCB-207ENST00000466072 PEAK1Q9H792 1746 aa24.11■■□□□ 1.45
PCCB-207ENST00000466072 BLMP54132 1417 aaPredicted RBP24.1■■□□□ 1.45
PCCB-207ENST00000466072 PPM1GO15355 546 aaPredicted RBP24.1■■□□□ 1.45
PCCB-207ENST00000466072 CNGB1Q14028 1251 aaPredicted RBP24.09■■□□□ 1.45
PCCB-207ENST00000466072 POLKQ9UBT6 870 aa24.09■■□□□ 1.45
PCCB-207ENST00000466072 MORC1Q86VD1 984 aa24.06■■□□□ 1.44
PCCB-207ENST00000466072 RTL1A6NKG5 1358 aa24.06■■□□□ 1.44
PCCB-207ENST00000466072 CC2D1BQ5T0F9 858 aaKnown RBP24.05■■□□□ 1.44
PCCB-207ENST00000466072 ANKRD26Q9UPS8 1709 aa24.05■■□□□ 1.44
PCCB-207ENST00000466072 DISP2A7MBM2 1401 aa24.04■■□□□ 1.44
PCCB-207ENST00000466072 NSD2O96028 1365 aa24.04■■□□□ 1.44
PCCB-207ENST00000466072 FLT4P35916 1363 aa24.04■■□□□ 1.44
PCCB-207ENST00000466072 NBPF6Q5VWK0 638 aa24.03■■□□□ 1.44
PCCB-207ENST00000466072 NBPF4Q96M43 638 aa24.03■■□□□ 1.44
PCCB-207ENST00000466072 INSRP06213 1382 aa24.03■■□□□ 1.44
PCCB-207ENST00000466072 PDE3BQ13370 1112 aa24.03■■□□□ 1.44
PCCB-207ENST00000466072 USHBP1Q8N6Y0 703 aa24.03■■□□□ 1.44
PCCB-207ENST00000466072 MAP2P11137 1827 aaKnown RBP24.02■■□□□ 1.44
PCCB-207ENST00000466072 RGPD2P0DJD1 1756 aa24.02■■□□□ 1.44
PCCB-207ENST00000466072 DDB1Q16531 1140 aa24■■□□□ 1.43
PCCB-207ENST00000466072 PARP4Q9UKK3 1724 aaKnown RBP24■■□□□ 1.43
PCCB-207ENST00000466072 WNK3Q9BYP7 1800 aa23.99■■□□□ 1.43
PCCB-207ENST00000466072 LRRC37A3O60309 1634 aa23.99■■□□□ 1.43
PCCB-207ENST00000466072 KIF24Q5T7B8 1368 aa23.99■■□□□ 1.43
PCCB-207ENST00000466072 MIER1Q8N108 512 aa23.98■■□□□ 1.43
PCCB-207ENST00000466072 IL2RBP14784 551 aa23.98■■□□□ 1.43
PCCB-207ENST00000466072 MARCH10Q8NA82 808 aaPredicted RBP23.98■■□□□ 1.43
PCCB-207ENST00000466072 CDCA7Q9BWT1 371 aaPredicted RBP23.97■■□□□ 1.43
PCCB-207ENST00000466072 FAM208AQ9UK61 1670 aaKnown RBP23.95■■□□□ 1.42
PCCB-207ENST00000466072 EXOC5O00471 708 aa23.95■■□□□ 1.42
PCCB-207ENST00000466072 DEFB132Q7Z7B7 95 aa23.95■■□□□ 1.42
PCCB-207ENST00000466072 EIF4A2Q14240 407 aaKnown RBP23.94■■□□□ 1.42
PCCB-207ENST00000466072 FAM196AQ6ZSG2 479 aa23.94■■□□□ 1.42
PCCB-207ENST00000466072 TRIM37O94972 964 aa23.94■■□□□ 1.42
PCCB-207ENST00000466072 SMG6Q86US8 1419 aaKnown RBP23.93■■□□□ 1.42
PCCB-207ENST00000466072 MEGF6O75095 1541 aa23.92■■□□□ 1.42
PCCB-207ENST00000466072 EYA1Q99502 592 aa23.92■■□□□ 1.42
PCCB-207ENST00000466072 PTF1AQ7RTS3 328 aa23.91■■□□□ 1.42
PCCB-207ENST00000466072 NPC1L1Q9UHC9 1359 aa23.91■■□□□ 1.42
PCCB-207ENST00000466072 MTHFSP49914 203 aa23.91■■□□□ 1.42
PCCB-207ENST00000466072 CCDC125Q86Z20 511 aa23.9■■□□□ 1.42
PCCB-207ENST00000466072 TNS2Q63HR2 1409 aa23.9■■□□□ 1.42
PCCB-207ENST00000466072 DDX10Q13206 875 aaKnown RBP23.89■■□□□ 1.42
PCCB-207ENST00000466072 OVOS2A0A0G2JMS6 1433 aa23.87■■□□□ 1.41
PCCB-207ENST00000466072 CENPBP07199 599 aaPredicted RBP23.87■■□□□ 1.41
PCCB-207ENST00000466072 DDX54Q8TDD1 881 aaKnown RBP23.87■■□□□ 1.41
PCCB-207ENST00000466072 SF3B2Q13435 895 aaKnown RBP23.86■■□□□ 1.41
PCCB-207ENST00000466072 EN1Q05925 392 aaPredicted RBP23.84■■□□□ 1.41
PCCB-207ENST00000466072 RAPGEF4Q8WZA2 1011 aa23.84■■□□□ 1.41
PCCB-207ENST00000466072 NCAPD2Q15021 1401 aa23.84■■□□□ 1.41
PCCB-207ENST00000466072 ZCRB1Q8TBF4 217 aaKnown RBP23.84■■□□□ 1.41
PCCB-207ENST00000466072 KCNQ2O43526 872 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms