RNA–Protein interactions for RNA: ENST00000464045.1

THUMPD3-208, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-208ENST00000464045 USP54Q70EL1 1684 aa10.37□□□□□ -0.75
THUMPD3-208ENST00000464045 LMO7Q8WWI1 1683 aa10.37□□□□□ -0.75
THUMPD3-208ENST00000464045 ABCC6O95255 1503 aa10.37□□□□□ -0.75
THUMPD3-208ENST00000464045 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.36□□□□□ -0.75
THUMPD3-208ENST00000464045 SPATA31A1Q5TZJ5 1347 aa10.35□□□□□ -0.75
THUMPD3-208ENST00000464045 CAMTA1Q9Y6Y1 1673 aa10.35□□□□□ -0.75
THUMPD3-208ENST00000464045 NFAT5O94916 1531 aa10.35□□□□□ -0.75
THUMPD3-208ENST00000464045 EVA1CP58658 441 aa10.35□□□□□ -0.75
THUMPD3-208ENST00000464045 ARHGEF25Q86VW2 580 aa10.35□□□□□ -0.75
THUMPD3-208ENST00000464045 NME9Q86XW9 330 aa10.35□□□□□ -0.75
THUMPD3-208ENST00000464045 COL5A2P05997 1499 aaPredicted RBP10.35□□□□□ -0.75
THUMPD3-208ENST00000464045 OVOS2A0A0J9YW53 1432 aa10.34□□□□□ -0.75
THUMPD3-208ENST00000464045 OVOS2Q6IE36 1432 aa10.34□□□□□ -0.75
THUMPD3-208ENST00000464045 BARGINQ6ZT62 677 aa10.34□□□□□ -0.75
THUMPD3-208ENST00000464045 STRN4Q9NRL3 753 aa10.34□□□□□ -0.75
THUMPD3-208ENST00000464045 THRAP3Q9Y2W1 955 aaKnown RBP10.34□□□□□ -0.75
THUMPD3-208ENST00000464045 HSPA5P11021 654 aaKnown RBP10.33□□□□□ -0.76
THUMPD3-208ENST00000464045 EN1Q05925 392 aaPredicted RBP10.33□□□□□ -0.76
THUMPD3-208ENST00000464045 CRB1P82279 1406 aa10.33□□□□□ -0.76
THUMPD3-208ENST00000464045 THSD7AQ9UPZ6 1657 aa10.32□□□□□ -0.76
THUMPD3-208ENST00000464045 BAG6P46379 1132 aa10.32□□□□□ -0.76
THUMPD3-208ENST00000464045 LARP1Q6PKG0 1096 aaKnown RBP10.32□□□□□ -0.76
THUMPD3-208ENST00000464045 PPP4R3CPQ6ZMV5 832 aa10.32□□□□□ -0.76
THUMPD3-208ENST00000464045 TCP11L2Q8N4U5 519 aa10.32□□□□□ -0.76
THUMPD3-208ENST00000464045 COG3Q96JB2 828 aa10.32□□□□□ -0.76
THUMPD3-208ENST00000464045 USP35Q9P2H5 1018 aa10.32□□□□□ -0.76
THUMPD3-208ENST00000464045 WDR17Q8IZU2 1322 aa10.32□□□□□ -0.76
THUMPD3-208ENST00000464045 COL18A1P39060 1754 aa10.31□□□□□ -0.76
THUMPD3-208ENST00000464045 ZBTB7CA1YPR0 619 aa10.3□□□□□ -0.76
THUMPD3-208ENST00000464045 SOX12O15370 315 aa10.3□□□□□ -0.76
THUMPD3-208ENST00000464045 R3HDM1Q15032 1099 aaKnown RBP10.3□□□□□ -0.76
THUMPD3-208ENST00000464045 NCBP3Q53F19 620 aaKnown RBP10.3□□□□□ -0.76
THUMPD3-208ENST00000464045 AXIN2Q9Y2T1 843 aa10.3□□□□□ -0.76
THUMPD3-208ENST00000464045 MYOM1P52179 1685 aa10.3□□□□□ -0.76
THUMPD3-208ENST00000464045 FYB1O15117 783 aa10.29□□□□□ -0.76
THUMPD3-208ENST00000464045 TRIM37O94972 964 aa10.29□□□□□ -0.76
THUMPD3-208ENST00000464045 TOM1L2Q6ZVM7 507 aa10.29□□□□□ -0.76
THUMPD3-208ENST00000464045 CDCA7Q9BWT1 371 aaPredicted RBP10.29□□□□□ -0.76
THUMPD3-208ENST00000464045 NSD3Q9BZ95 1437 aa10.28□□□□□ -0.76
THUMPD3-208ENST00000464045 C11orf95C9JLR9 678 aaPredicted RBP10.28□□□□□ -0.76
THUMPD3-208ENST00000464045 EZH2Q15910 746 aaKnown RBP10.28□□□□□ -0.76
THUMPD3-208ENST00000464045 CARD10Q9BWT7 1032 aa10.28□□□□□ -0.76
THUMPD3-208ENST00000464045 CARD14Q9BXL6 1004 aa10.28□□□□□ -0.76
THUMPD3-208ENST00000464045 ERBB3P21860 1342 aa10.28□□□□□ -0.76
THUMPD3-208ENST00000464045 CGNL1Q0VF96 1302 aa10.28□□□□□ -0.76
THUMPD3-208ENST00000464045 RTL1A6NKG5 1358 aa10.27□□□□□ -0.76
THUMPD3-208ENST00000464045 CCDC7Q96M83 1385 aa10.27□□□□□ -0.76
THUMPD3-208ENST00000464045 CSB-PGBD3P0DP91 1061 aa10.27□□□□□ -0.77
THUMPD3-208ENST00000464045 IP6K1Q92551 441 aa10.27□□□□□ -0.77
THUMPD3-208ENST00000464045 KIF24Q5T7B8 1368 aa10.26□□□□□ -0.77
THUMPD3-208ENST00000464045 PDE3BQ13370 1112 aa10.26□□□□□ -0.77
THUMPD3-208ENST00000464045 GGNBP2Q9H3C7 697 aa10.26□□□□□ -0.77
THUMPD3-208ENST00000464045 MAP3K19Q56UN5 1328 aa10.26□□□□□ -0.77
THUMPD3-208ENST00000464045 PARP4Q9UKK3 1724 aaKnown RBP10.25□□□□□ -0.77
THUMPD3-208ENST00000464045 APBA3O96018 575 aa10.25□□□□□ -0.77
THUMPD3-208ENST00000464045 FAM196AQ6ZSG2 479 aa10.25□□□□□ -0.77
THUMPD3-208ENST00000464045 ANKRD24Q8TF21 1146 aa10.25□□□□□ -0.77
THUMPD3-208ENST00000464045 POLR3GLQ9BT43 218 aa10.25□□□□□ -0.77
THUMPD3-208ENST00000464045 NSD2O96028 1365 aa10.25□□□□□ -0.77
THUMPD3-208ENST00000464045 DISP2A7MBM2 1401 aa10.24□□□□□ -0.77
THUMPD3-208ENST00000464045 RGPD1P0DJD0 1748 aa10.24□□□□□ -0.77
THUMPD3-208ENST00000464045 LTN1O94822 1766 aa10.24□□□□□ -0.77
THUMPD3-208ENST00000464045 KIF20BQ96Q89 1820 aa10.24□□□□□ -0.77
THUMPD3-208ENST00000464045 HOXC9P31274 260 aa10.24□□□□□ -0.77
THUMPD3-208ENST00000464045 AMPHP49418 695 aa10.24□□□□□ -0.77
THUMPD3-208ENST00000464045 LRP5O75197 1615 aa10.23□□□□□ -0.77
THUMPD3-208ENST00000464045 DDB1Q16531 1140 aa10.23□□□□□ -0.77
THUMPD3-208ENST00000464045 PANK3Q9H999 370 aa10.23□□□□□ -0.77
THUMPD3-208ENST00000464045 NLRP2Q9NX02 1062 aa10.23□□□□□ -0.77
THUMPD3-208ENST00000464045 TNS1Q9HBL0 1735 aaKnown RBP10.23□□□□□ -0.77
THUMPD3-208ENST00000464045 KIF7Q2M1P5 1343 aa10.23□□□□□ -0.77
THUMPD3-208ENST00000464045 BCL9O00512 1426 aa10.23□□□□□ -0.77
THUMPD3-208ENST00000464045 FAM208AQ9UK61 1670 aaKnown RBP10.22□□□□□ -0.77
THUMPD3-208ENST00000464045 INSRP06213 1382 aa10.22□□□□□ -0.77
THUMPD3-208ENST00000464045 FLT4P35916 1363 aa10.22□□□□□ -0.77
THUMPD3-208ENST00000464045 OVOS2A0A0G2JMS6 1433 aa10.22□□□□□ -0.77
THUMPD3-208ENST00000464045 SMG6Q86US8 1419 aaKnown RBP10.22□□□□□ -0.77
THUMPD3-208ENST00000464045 LRRC37A3O60309 1634 aa10.22□□□□□ -0.77
THUMPD3-208ENST00000464045 RGPD5Q99666 1765 aa10.21□□□□□ -0.77
THUMPD3-208ENST00000464045 EXOC5O00471 708 aa10.21□□□□□ -0.77
THUMPD3-208ENST00000464045 IL2RBP14784 551 aa10.21□□□□□ -0.77
THUMPD3-208ENST00000464045 RRS1Q15050 365 aaKnown RBP10.21□□□□□ -0.77
THUMPD3-208ENST00000464045 CAMKK2Q96RR4 588 aa10.21□□□□□ -0.77
THUMPD3-208ENST00000464045 TNS2Q63HR2 1409 aa10.21□□□□□ -0.78
THUMPD3-208ENST00000464045 WNK3Q9BYP7 1800 aa10.21□□□□□ -0.78
THUMPD3-208ENST00000464045 FBLN1P23142 703 aa10.2□□□□□ -0.78
THUMPD3-208ENST00000464045 KNSTRNQ9Y448 316 aa10.2□□□□□ -0.78
THUMPD3-208ENST00000464045 PARD3Q8TEW0 1356 aa10.19□□□□□ -0.78
THUMPD3-208ENST00000464045 PEAK1Q9H792 1746 aa10.19□□□□□ -0.78
THUMPD3-208ENST00000464045 WASHC2AQ641Q2 1341 aa10.18□□□□□ -0.78
THUMPD3-208ENST00000464045 MARCH10Q8NA82 808 aaPredicted RBP10.18□□□□□ -0.78
THUMPD3-208ENST00000464045 LTV1Q96GA3 475 aaPredicted RBP10.18□□□□□ -0.78
THUMPD3-208ENST00000464045 ANKRD26Q9UPS8 1709 aa10.18□□□□□ -0.78
THUMPD3-208ENST00000464045 HSP90AB2PQ58FF8 381 aa10.17□□□□□ -0.78
THUMPD3-208ENST00000464045 POLKQ9UBT6 870 aa10.17□□□□□ -0.78
THUMPD3-208ENST00000464045 EMILIN1Q9Y6C2 1016 aa10.17□□□□□ -0.78
THUMPD3-208ENST00000464045 AMER1Q5JTC6 1135 aaPredicted RBP10.16□□□□□ -0.78
THUMPD3-208ENST00000464045 NBPF6Q5VWK0 638 aa10.16□□□□□ -0.78
THUMPD3-208ENST00000464045 PTF1AQ7RTS3 328 aa10.16□□□□□ -0.78
THUMPD3-208ENST00000464045 MORC1Q86VD1 984 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms