RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 NRAPQ86VF7 1730 aa18.91■□□□□ 0.62
SEMA3D-203ENST00000463315 CHRNA2Q15822 529 aa18.91■□□□□ 0.62
SEMA3D-203ENST00000463315 POLR3GLQ9BT43 218 aa18.91■□□□□ 0.62
SEMA3D-203ENST00000463315 NSD3Q9BZ95 1437 aa18.91■□□□□ 0.62
SEMA3D-203ENST00000463315 ONECUT3O60422 494 aaPredicted RBP18.9■□□□□ 0.62
SEMA3D-203ENST00000463315 ZRANB1Q9UGI0 708 aa18.9■□□□□ 0.62
SEMA3D-203ENST00000463315 CAMTA1Q9Y6Y1 1673 aa18.89■□□□□ 0.61
SEMA3D-203ENST00000463315 PANK3Q9H999 370 aa18.89■□□□□ 0.61
SEMA3D-203ENST00000463315 SPINK5Q9NQ38 1064 aaPredicted RBP18.89■□□□□ 0.61
SEMA3D-203ENST00000463315 CCDC7Q96M83 1385 aa18.88■□□□□ 0.61
SEMA3D-203ENST00000463315 SOCS7O14512 581 aa18.87■□□□□ 0.61
SEMA3D-203ENST00000463315 EVA1CP58658 441 aa18.87■□□□□ 0.61
SEMA3D-203ENST00000463315 SPATA31A5Q5VU36 1347 aa18.87■□□□□ 0.61
SEMA3D-203ENST00000463315 SPATA31A7Q8IWB4 1347 aa18.87■□□□□ 0.61
SEMA3D-203ENST00000463315 COL18A1P39060 1754 aa18.86■□□□□ 0.61
SEMA3D-203ENST00000463315 GLI3P10071 1580 aa18.86■□□□□ 0.61
SEMA3D-203ENST00000463315 COL5A2P05997 1499 aaPredicted RBP18.86■□□□□ 0.61
SEMA3D-203ENST00000463315 NSD2O96028 1365 aa18.86■□□□□ 0.61
SEMA3D-203ENST00000463315 GGNBP2Q9H3C7 697 aa18.86■□□□□ 0.61
SEMA3D-203ENST00000463315 WASHC2AQ641Q2 1341 aa18.85■□□□□ 0.61
SEMA3D-203ENST00000463315 THRAP3Q9Y2W1 955 aaKnown RBP18.85■□□□□ 0.61
SEMA3D-203ENST00000463315 KIF20BQ96Q89 1820 aa18.85■□□□□ 0.61
SEMA3D-203ENST00000463315 RGS12O14924 1447 aa18.84■□□□□ 0.61
SEMA3D-203ENST00000463315 KIF24Q5T7B8 1368 aa18.84■□□□□ 0.61
SEMA3D-203ENST00000463315 SPATA31A1Q5TZJ5 1347 aa18.84■□□□□ 0.61
SEMA3D-203ENST00000463315 CCDC9Q9Y3X0 531 aaKnown RBP18.84■□□□□ 0.61
SEMA3D-203ENST00000463315 BLMP54132 1417 aaPredicted RBP18.83■□□□□ 0.61
SEMA3D-203ENST00000463315 SOX12O15370 315 aa18.83■□□□□ 0.6
SEMA3D-203ENST00000463315 STRN4Q9NRL3 753 aa18.83■□□□□ 0.6
SEMA3D-203ENST00000463315 AXIN2Q9Y2T1 843 aa18.83■□□□□ 0.6
SEMA3D-203ENST00000463315 KNSTRNQ9Y448 316 aa18.83■□□□□ 0.6
SEMA3D-203ENST00000463315 CRB1P82279 1406 aa18.83■□□□□ 0.6
SEMA3D-203ENST00000463315 WDR17Q8IZU2 1322 aa18.82■□□□□ 0.6
SEMA3D-203ENST00000463315 CAPN15O75808 1086 aa18.82■□□□□ 0.6
SEMA3D-203ENST00000463315 BARGINQ6ZT62 677 aa18.82■□□□□ 0.6
SEMA3D-203ENST00000463315 IP6K1Q92551 441 aa18.82■□□□□ 0.6
SEMA3D-203ENST00000463315 RTL1A6NKG5 1358 aa18.81■□□□□ 0.6
SEMA3D-203ENST00000463315 LARP1Q6PKG0 1096 aaKnown RBP18.81■□□□□ 0.6
SEMA3D-203ENST00000463315 MAP3K19Q56UN5 1328 aa18.8■□□□□ 0.6
SEMA3D-203ENST00000463315 ZBTB7CA1YPR0 619 aa18.8■□□□□ 0.6
SEMA3D-203ENST00000463315 TCP11L2Q8N4U5 519 aa18.8■□□□□ 0.6
SEMA3D-203ENST00000463315 LTN1O94822 1766 aa18.8■□□□□ 0.6
SEMA3D-203ENST00000463315 PER1O15534 1290 aaPredicted RBP18.79■□□□□ 0.6
SEMA3D-203ENST00000463315 ERBB3P21860 1342 aa18.78■□□□□ 0.6
SEMA3D-203ENST00000463315 SEPT12Q8IYM1 358 aa18.78■□□□□ 0.6
SEMA3D-203ENST00000463315 CARD10Q9BWT7 1032 aa18.78■□□□□ 0.6
SEMA3D-203ENST00000463315 NPC1L1Q9UHC9 1359 aa18.78■□□□□ 0.6
SEMA3D-203ENST00000463315 ANKRD26Q9UPS8 1709 aa18.77■□□□□ 0.6
SEMA3D-203ENST00000463315 AMPHP49418 695 aa18.77■□□□□ 0.6
SEMA3D-203ENST00000463315 FAM98CQ17RN3 349 aaKnown RBP18.77■□□□□ 0.6
SEMA3D-203ENST00000463315 HOXC9P31274 260 aa18.76■□□□□ 0.59
SEMA3D-203ENST00000463315 AMER1Q5JTC6 1135 aaPredicted RBP18.76■□□□□ 0.59
SEMA3D-203ENST00000463315 TOM1L2Q6ZVM7 507 aa18.76■□□□□ 0.59
SEMA3D-203ENST00000463315 CDCA7Q9BWT1 371 aaPredicted RBP18.76■□□□□ 0.59
SEMA3D-203ENST00000463315 FOXD4L1Q9NU39 408 aa18.75■□□□□ 0.59
SEMA3D-203ENST00000463315 FLT4P35916 1363 aa18.75■□□□□ 0.59
SEMA3D-203ENST00000463315 THSD7AQ9UPZ6 1657 aa18.75■□□□□ 0.59
SEMA3D-203ENST00000463315 CSB-PGBD3P0DP91 1061 aa18.74■□□□□ 0.59
SEMA3D-203ENST00000463315 ANKRD24Q8TF21 1146 aa18.74■□□□□ 0.59
SEMA3D-203ENST00000463315 RGPD5Q99666 1765 aa18.73■□□□□ 0.59
SEMA3D-203ENST00000463315 INSRP06213 1382 aa18.73■□□□□ 0.59
SEMA3D-203ENST00000463315 MYCNP04198 464 aaPredicted RBP18.73■□□□□ 0.59
SEMA3D-203ENST00000463315 RRS1Q15050 365 aaKnown RBP18.73■□□□□ 0.59
SEMA3D-203ENST00000463315 USP35Q9P2H5 1018 aa18.73■□□□□ 0.59
SEMA3D-203ENST00000463315 FBLN1P23142 703 aa18.72■□□□□ 0.59
SEMA3D-203ENST00000463315 KRT27Q7Z3Y8 459 aa18.72■□□□□ 0.59
SEMA3D-203ENST00000463315 MORC1Q86VD1 984 aa18.72■□□□□ 0.59
SEMA3D-203ENST00000463315 FAM208AQ9UK61 1670 aaKnown RBP18.72■□□□□ 0.59
SEMA3D-203ENST00000463315 POLKQ9UBT6 870 aa18.71■□□□□ 0.59
SEMA3D-203ENST00000463315 A0A0G2JS52 829 aa18.7■□□□□ 0.58
SEMA3D-203ENST00000463315 MYT1Q01538 1121 aa18.7■□□□□ 0.58
SEMA3D-203ENST00000463315 SMG6Q86US8 1419 aaKnown RBP18.7■□□□□ 0.58
SEMA3D-203ENST00000463315 CCDC125Q86Z20 511 aa18.69■□□□□ 0.58
SEMA3D-203ENST00000463315 NLRP2Q9NX02 1062 aa18.69■□□□□ 0.58
SEMA3D-203ENST00000463315 EP400Q96L91 3159 aa18.69■□□□□ 0.58
SEMA3D-203ENST00000463315 EMILIN1Q9Y6C2 1016 aa18.68■□□□□ 0.58
SEMA3D-203ENST00000463315 PARP4Q9UKK3 1724 aaKnown RBP18.68■□□□□ 0.58
SEMA3D-203ENST00000463315 DISP2A7MBM2 1401 aa18.67■□□□□ 0.58
SEMA3D-203ENST00000463315 HSP90AB2PQ58FF8 381 aa18.67■□□□□ 0.58
SEMA3D-203ENST00000463315 SAMD1Q6SPF0 538 aaPredicted RBP18.67■□□□□ 0.58
SEMA3D-203ENST00000463315 UPF1Q92900 1129 aaKnown RBP eCLIP18.67■□□□□ 0.58
SEMA3D-203ENST00000463315 BRWD3Q6RI45 1802 aa18.67■□□□□ 0.58
SEMA3D-203ENST00000463315 MAP2P11137 1827 aaKnown RBP18.66■□□□□ 0.58
SEMA3D-203ENST00000463315 PDE3BQ13370 1112 aa18.66■□□□□ 0.58
SEMA3D-203ENST00000463315 PEAK1Q9H792 1746 aa18.66■□□□□ 0.58
SEMA3D-203ENST00000463315 ZBTB22O15209 634 aa18.65■□□□□ 0.58
SEMA3D-203ENST00000463315 PPM1GO15355 546 aaPredicted RBP18.64■□□□□ 0.57
SEMA3D-203ENST00000463315 IL2RBP14784 551 aa18.64■□□□□ 0.57
SEMA3D-203ENST00000463315 TNNT2P45379 298 aaPredicted RBP18.64■□□□□ 0.57
SEMA3D-203ENST00000463315 DDB1Q16531 1140 aa18.64■□□□□ 0.57
SEMA3D-203ENST00000463315 WNK3Q9BYP7 1800 aa18.63■□□□□ 0.57
SEMA3D-203ENST00000463315 FAM196AQ6ZSG2 479 aa18.63■□□□□ 0.57
SEMA3D-203ENST00000463315 LTV1Q96GA3 475 aaPredicted RBP18.63■□□□□ 0.57
SEMA3D-203ENST00000463315 EXOC5O00471 708 aa18.62■□□□□ 0.57
SEMA3D-203ENST00000463315 BCL9O00512 1426 aa18.61■□□□□ 0.57
SEMA3D-203ENST00000463315 NCAPD2Q15021 1401 aa18.61■□□□□ 0.57
SEMA3D-203ENST00000463315 PLEKHG2Q9H7P9 1386 aa18.61■□□□□ 0.57
SEMA3D-203ENST00000463315 CC2D1BQ5T0F9 858 aaKnown RBP18.61■□□□□ 0.57
SEMA3D-203ENST00000463315 NBPF6Q5VWK0 638 aa18.61■□□□□ 0.57
SEMA3D-203ENST00000463315 NBPF4Q96M43 638 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms