RNA–Protein interactions for RNA: ENST00000463077.5

COMMD2-201, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-201ENST00000463077 DDB1Q16531 1140 aa29.4■■■□□ 2.3
COMMD2-201ENST00000463077 BCL11BQ9C0K0 894 aaPredicted RBP29.4■■■□□ 2.3
COMMD2-201ENST00000463077 CABP1Q9NZU7 370 aa29.4■■■□□ 2.3
COMMD2-201ENST00000463077 COL18A1P39060 1754 aa29.38■■■□□ 2.29
COMMD2-201ENST00000463077 BCL9O00512 1426 aa29.37■■■□□ 2.29
COMMD2-201ENST00000463077 PTF1AQ7RTS3 328 aa29.37■■■□□ 2.29
COMMD2-201ENST00000463077 PROM2Q8N271 834 aa29.37■■■□□ 2.29
COMMD2-201ENST00000463077 ANO8Q9HCE9 1232 aaPredicted RBP29.37■■■□□ 2.29
COMMD2-201ENST00000463077 AXIN2Q9Y2T1 843 aa29.37■■■□□ 2.29
COMMD2-201ENST00000463077 LRRC37A3O60309 1634 aa29.37■■■□□ 2.29
COMMD2-201ENST00000463077 TOM1L2Q6ZVM7 507 aa29.35■■■□□ 2.29
COMMD2-201ENST00000463077 MARCH10Q8NA82 808 aaPredicted RBP29.34■■■□□ 2.29
COMMD2-201ENST00000463077 WDR17Q8IZU2 1322 aa29.34■■■□□ 2.29
COMMD2-201ENST00000463077 ZBTB7CA1YPR0 619 aa29.33■■■□□ 2.29
COMMD2-201ENST00000463077 CDCA7Q9BWT1 371 aaPredicted RBP29.33■■■□□ 2.29
COMMD2-201ENST00000463077 CASZ1Q86V15 1759 aa29.32■■■□□ 2.28
COMMD2-201ENST00000463077 TRPM1Q7Z4N2 1603 aa29.32■■■□□ 2.28
COMMD2-201ENST00000463077 DCAF8L1A6NGE4 600 aa29.32■■■□□ 2.28
COMMD2-201ENST00000463077 ARHGEF25Q86VW2 580 aa29.31■■■□□ 2.28
COMMD2-201ENST00000463077 PDGFDQ9GZP0 370 aaPredicted RBP29.3■■■□□ 2.28
COMMD2-201ENST00000463077 PIK3C2AO00443 1686 aa29.29■■■□□ 2.28
COMMD2-201ENST00000463077 QRICH2Q9H0J4 1663 aa29.29■■■□□ 2.28
COMMD2-201ENST00000463077 CARD10Q9BWT7 1032 aa29.28■■■□□ 2.28
COMMD2-201ENST00000463077 CPSF1Q10570 1443 aaKnown RBP29.28■■■□□ 2.28
COMMD2-201ENST00000463077 WNK3Q9BYP7 1800 aa29.27■■■□□ 2.28
COMMD2-201ENST00000463077 PTGER2P43116 358 aa29.26■■■□□ 2.27
COMMD2-201ENST00000463077 ZNF692Q9BU19 519 aaPredicted RBP29.26■■■□□ 2.27
COMMD2-201ENST00000463077 KCNH5Q8NCM2 988 aa29.25■■■□□ 2.27
COMMD2-201ENST00000463077 TTC21BQ7Z4L5 1316 aa29.24■■■□□ 2.27
COMMD2-201ENST00000463077 EVC2Q86UK5 1308 aa29.24■■■□□ 2.27
COMMD2-201ENST00000463077 ROCK2O75116 1388 aaKnown RBP29.23■■■□□ 2.27
COMMD2-201ENST00000463077 TXNRD1Q16881 649 aa29.22■■■□□ 2.27
COMMD2-201ENST00000463077 ZBTB7AO95365 584 aa29.21■■■□□ 2.27
COMMD2-201ENST00000463077 AKAP12Q02952 1782 aa29.21■■■□□ 2.27
COMMD2-201ENST00000463077 EXOC5O00471 708 aa29.2■■■□□ 2.26
COMMD2-201ENST00000463077 TTC21AQ8NDW8 1320 aa29.2■■■□□ 2.26
COMMD2-201ENST00000463077 RGPD5Q99666 1765 aa29.19■■■□□ 2.26
COMMD2-201ENST00000463077 SLC15A2Q16348 729 aa29.19■■■□□ 2.26
COMMD2-201ENST00000463077 STK32BQ9NY57 414 aa29.18■■■□□ 2.26
COMMD2-201ENST00000463077 ATF5Q9Y2D1 282 aaPredicted RBP29.17■■■□□ 2.26
COMMD2-201ENST00000463077 CCDC7Q96M83 1385 aa29.16■■■□□ 2.26
COMMD2-201ENST00000463077 CSB-PGBD3P0DP91 1061 aa29.16■■■□□ 2.26
COMMD2-201ENST00000463077 MYOM1P52179 1685 aa29.15■■■□□ 2.26
COMMD2-201ENST00000463077 NFAT5O94916 1531 aa29.15■■■□□ 2.26
COMMD2-201ENST00000463077 SGIP1Q9BQI5 828 aa29.15■■■□□ 2.26
COMMD2-201ENST00000463077 SYT17Q9BSW7 474 aa29.13■■■□□ 2.25
COMMD2-201ENST00000463077 CARD11Q9BXL7 1154 aa29.13■■■□□ 2.25
COMMD2-201ENST00000463077 UTRNP46939 3433 aa29.13■■■□□ 2.25
COMMD2-201ENST00000463077 ABCC6O95255 1503 aa29.13■■■□□ 2.25
COMMD2-201ENST00000463077 SOX12O15370 315 aa29.12■■■□□ 2.25
COMMD2-201ENST00000463077 MTFR1LQ9H019 292 aa29.12■■■□□ 2.25
COMMD2-201ENST00000463077 TNS2Q63HR2 1409 aa29.11■■■□□ 2.25
COMMD2-201ENST00000463077 FHDC1Q9C0D6 1143 aaPredicted RBP29.11■■■□□ 2.25
COMMD2-201ENST00000463077 ZNF784Q8NCA9 323 aaPredicted RBP29.09■■■□□ 2.25
COMMD2-201ENST00000463077 KTN1Q86UP2 1357 aaKnown RBP29.08■■■□□ 2.25
COMMD2-201ENST00000463077 USP31Q70CQ4 1352 aa29.07■■■□□ 2.24
COMMD2-201ENST00000463077 NHSQ6T4R5 1651 aa29.05■■■□□ 2.24
COMMD2-201ENST00000463077 ERBB3P21860 1342 aa29.04■■■□□ 2.24
COMMD2-201ENST00000463077 ACSBG1Q96GR2 724 aa29.02■■■□□ 2.24
COMMD2-201ENST00000463077 PAPPAQ13219 1627 aa29.02■■■□□ 2.24
COMMD2-201ENST00000463077 MAP3K5Q99683 1374 aa29.01■■■□□ 2.23
COMMD2-201ENST00000463077 MON2Q7Z3U7 1717 aa29■■■□□ 2.23
COMMD2-201ENST00000463077 USP54Q70EL1 1684 aa29■■■□□ 2.23
COMMD2-201ENST00000463077 IL2RBP14784 551 aa29■■■□□ 2.23
COMMD2-201ENST00000463077 ARXQ96QS3 562 aa29■■■□□ 2.23
COMMD2-201ENST00000463077 NLRP2Q9NX02 1062 aa28.99■■■□□ 2.23
COMMD2-201ENST00000463077 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.98■■■□□ 2.23
COMMD2-201ENST00000463077 SBNO2Q9Y2G9 1366 aa28.98■■■□□ 2.23
COMMD2-201ENST00000463077 LRRC4BQ9NT99 713 aa28.97■■■□□ 2.23
COMMD2-201ENST00000463077 CD163L1Q9NR16 1453 aa28.97■■■□□ 2.23
COMMD2-201ENST00000463077 CHD4Q14839 1912 aa28.96■■■□□ 2.23
COMMD2-201ENST00000463077 NME9Q86XW9 330 aa28.96■■■□□ 2.23
COMMD2-201ENST00000463077 ZNF827Q17R98 1081 aa28.95■■■□□ 2.22
COMMD2-201ENST00000463077 BTAF1O14981 1849 aa28.94■■■□□ 2.22
COMMD2-201ENST00000463077 ANKRD24Q8TF21 1146 aa28.94■■■□□ 2.22
COMMD2-201ENST00000463077 USP47Q96K76 1375 aa28.93■■■□□ 2.22
COMMD2-201ENST00000463077 ST20-MTHFSA0A0A6YYL1 179 aa28.92■■■□□ 2.22
COMMD2-201ENST00000463077 AKT1S1Q96B36 256 aa28.92■■■□□ 2.22
COMMD2-201ENST00000463077 TESK2Q96S53 571 aa28.91■■■□□ 2.22
COMMD2-201ENST00000463077 SLC16A10Q8TF71 515 aa28.9■■■□□ 2.22
COMMD2-201ENST00000463077 LTN1O94822 1766 aa28.9■■■□□ 2.22
COMMD2-201ENST00000463077 SLC27A3Q5K4L6 730 aa28.88■■■□□ 2.21
COMMD2-201ENST00000463077 KAT6BQ8WYB5 2073 aa28.88■■■□□ 2.21
COMMD2-201ENST00000463077 SLC12A5Q9H2X9 1139 aa28.87■■■□□ 2.21
COMMD2-201ENST00000463077 C1QTNF8P60827 252 aa28.86■■■□□ 2.21
COMMD2-201ENST00000463077 EDC4Q6P2E9 1401 aaKnown RBP28.86■■■□□ 2.21
COMMD2-201ENST00000463077 HDGFL2Q7Z4V5 671 aaPredicted RBP28.85■■■□□ 2.21
COMMD2-201ENST00000463077 IP6K1Q92551 441 aa28.85■■■□□ 2.21
COMMD2-201ENST00000463077 COL24A1Q17RW2 1714 aa28.85■■■□□ 2.21
COMMD2-201ENST00000463077 QSER1Q2KHR3 1735 aa28.83■■■□□ 2.21
COMMD2-201ENST00000463077 SLC24A1O60721 1099 aa28.83■■■□□ 2.21
COMMD2-201ENST00000463077 TMC1Q8TDI8 760 aa28.83■■■□□ 2.21
COMMD2-201ENST00000463077 PUS7Q96PZ0 661 aaKnown RBP28.83■■■□□ 2.21
COMMD2-201ENST00000463077 PNPLA7Q6ZV29 1317 aa28.82■■■□□ 2.2
COMMD2-201ENST00000463077 GPR162Q16538 588 aa28.81■■■□□ 2.2
COMMD2-201ENST00000463077 DDX54Q8TDD1 881 aaKnown RBP28.81■■■□□ 2.2
COMMD2-201ENST00000463077 EIF4G2P78344 907 aaKnown RBP eCLIP28.8■■■□□ 2.2
COMMD2-201ENST00000463077 TERF2IPQ9NYB0 399 aa28.8■■■□□ 2.2
COMMD2-201ENST00000463077 A0A1W2PP64 1363 aa28.79■■■□□ 2.2
COMMD2-201ENST00000463077 SENP3-EIF4A1A0A087X0R7 540 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms