RNA–Protein interactions for RNA: ENST00000461426.1

SIGMAR1-204, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 939 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-204ENST00000461426 LARP1Q6PKG0 1096 aaKnown RBP36.65■■■■□ 3.46
SIGMAR1-204ENST00000461426 CGNL1Q0VF96 1302 aa36.64■■■■□ 3.46
SIGMAR1-204ENST00000461426 SEPT12Q8IYM1 358 aa36.63■■■■□ 3.45
SIGMAR1-204ENST00000461426 COL5A2P05997 1499 aaPredicted RBP36.62■■■■□ 3.45
SIGMAR1-204ENST00000461426 FAM98CQ17RN3 349 aaKnown RBP36.61■■■■□ 3.45
SIGMAR1-204ENST00000461426 COL18A1P39060 1754 aa36.6■■■■□ 3.45
SIGMAR1-204ENST00000461426 ABCC6O95255 1503 aa36.58■■■■□ 3.45
SIGMAR1-204ENST00000461426 TCP11L2Q8N4U5 519 aa36.57■■■■□ 3.44
SIGMAR1-204ENST00000461426 USP35Q9P2H5 1018 aa36.57■■■■□ 3.44
SIGMAR1-204ENST00000461426 THRAP3Q9Y2W1 955 aaKnown RBP36.57■■■■□ 3.44
SIGMAR1-204ENST00000461426 BARGINQ6ZT62 677 aa36.56■■■■□ 3.44
SIGMAR1-204ENST00000461426 WDR17Q8IZU2 1322 aa36.56■■■■□ 3.44
SIGMAR1-204ENST00000461426 A0A0G2JS52 829 aa36.55■■■■□ 3.44
SIGMAR1-204ENST00000461426 MYT1Q01538 1121 aa36.55■■■■□ 3.44
SIGMAR1-204ENST00000461426 TOM1L2Q6ZVM7 507 aa36.55■■■■□ 3.44
SIGMAR1-204ENST00000461426 IP6K1Q92551 441 aa36.55■■■■□ 3.44
SIGMAR1-204ENST00000461426 CCDC7Q96M83 1385 aa36.54■■■■□ 3.44
SIGMAR1-204ENST00000461426 CRB1P82279 1406 aa36.54■■■■□ 3.44
SIGMAR1-204ENST00000461426 CSB-PGBD3P0DP91 1061 aa36.53■■■■□ 3.44
SIGMAR1-204ENST00000461426 FBLN1P23142 703 aa36.53■■■■□ 3.44
SIGMAR1-204ENST00000461426 MAP3K19Q56UN5 1328 aa36.52■■■■□ 3.44
SIGMAR1-204ENST00000461426 WASHC2AQ641Q2 1341 aa36.52■■■■□ 3.44
SIGMAR1-204ENST00000461426 AMPHP49418 695 aa36.51■■■■□ 3.44
SIGMAR1-204ENST00000461426 KNSTRNQ9Y448 316 aa36.51■■■■□ 3.44
SIGMAR1-204ENST00000461426 ZEB1P37275 1124 aaPredicted RBP36.5■■■■□ 3.43
SIGMAR1-204ENST00000461426 KIF20BQ96Q89 1820 aa36.5■■■■□ 3.43
SIGMAR1-204ENST00000461426 CARD10Q9BWT7 1032 aa36.48■■■■□ 3.43
SIGMAR1-204ENST00000461426 RRS1Q15050 365 aaKnown RBP36.47■■■■□ 3.43
SIGMAR1-204ENST00000461426 KRT27Q7Z3Y8 459 aa36.47■■■■□ 3.43
SIGMAR1-204ENST00000461426 ERBB3P21860 1342 aa36.47■■■■□ 3.43
SIGMAR1-204ENST00000461426 BLMP54132 1417 aaPredicted RBP36.47■■■■□ 3.43
SIGMAR1-204ENST00000461426 UPF1Q92900 1129 aaKnown RBP eCLIP36.46■■■■□ 3.431e-7■■■■■ 27.2
SIGMAR1-204ENST00000461426 LTN1O94822 1766 aa36.45■■■■□ 3.43
SIGMAR1-204ENST00000461426 HOXC9P31274 260 aa36.45■■■■□ 3.43
SIGMAR1-204ENST00000461426 ANKRD24Q8TF21 1146 aa36.45■■■■□ 3.43
SIGMAR1-204ENST00000461426 NSD2O96028 1365 aa36.44■■■■□ 3.42
SIGMAR1-204ENST00000461426 RTL1A6NKG5 1358 aa36.42■■■■□ 3.42
SIGMAR1-204ENST00000461426 RGPD5Q99666 1765 aa36.42■■■■□ 3.42
SIGMAR1-204ENST00000461426 KIF24Q5T7B8 1368 aa36.41■■■■□ 3.42
SIGMAR1-204ENST00000461426 CDCA7Q9BWT1 371 aaPredicted RBP36.4■■■■□ 3.42
SIGMAR1-204ENST00000461426 NLRP2Q9NX02 1062 aa36.4■■■■□ 3.42
SIGMAR1-204ENST00000461426 PER1O15534 1290 aaPredicted RBP36.39■■■■□ 3.42
SIGMAR1-204ENST00000461426 THSD7AQ9UPZ6 1657 aa36.39■■■■□ 3.42
SIGMAR1-204ENST00000461426 LTV1Q96GA3 475 aaPredicted RBP36.37■■■■□ 3.41
SIGMAR1-204ENST00000461426 AMER1Q5JTC6 1135 aaPredicted RBP36.36■■■■□ 3.41
SIGMAR1-204ENST00000461426 BRWD3Q6RI45 1802 aa36.36■■■■□ 3.41
SIGMAR1-204ENST00000461426 PDE3BQ13370 1112 aa36.35■■■■□ 3.41
SIGMAR1-204ENST00000461426 MORC1Q86VD1 984 aa36.35■■■■□ 3.41
SIGMAR1-204ENST00000461426 FLT4P35916 1363 aa36.34■■■■□ 3.41
SIGMAR1-204ENST00000461426 CCDC125Q86Z20 511 aa36.33■■■■□ 3.41
SIGMAR1-204ENST00000461426 EMILIN1Q9Y6C2 1016 aa36.33■■■■□ 3.41
SIGMAR1-204ENST00000461426 TNNT2P45379 298 aaPredicted RBP36.32■■■■□ 3.4
SIGMAR1-204ENST00000461426 HSP90AB2PQ58FF8 381 aa36.32■■■■□ 3.4
SIGMAR1-204ENST00000461426 INSRP06213 1382 aa36.31■■■■□ 3.4
SIGMAR1-204ENST00000461426 POLKQ9UBT6 870 aa36.31■■■■□ 3.4
SIGMAR1-204ENST00000461426 PPM1GO15355 546 aaPredicted RBP36.3■■■■□ 3.4
SIGMAR1-204ENST00000461426 DDB1Q16531 1140 aa36.28■■■■□ 3.4
SIGMAR1-204ENST00000461426 EP400Q96L91 3159 aa36.27■■■■□ 3.4
SIGMAR1-204ENST00000461426 ANKRD26Q9UPS8 1709 aa36.27■■■■□ 3.4
SIGMAR1-204ENST00000461426 SMG6Q86US8 1419 aaKnown RBP36.25■■■■□ 3.39
SIGMAR1-204ENST00000461426 FAM196AQ6ZSG2 479 aa36.25■■■■□ 3.39
SIGMAR1-204ENST00000461426 IL2RBP14784 551 aa36.24■■■■□ 3.39
SIGMAR1-204ENST00000461426 DISP2A7MBM2 1401 aa36.24■■■■□ 3.39
SIGMAR1-204ENST00000461426 EXOC5O00471 708 aa36.23■■■■□ 3.39
SIGMAR1-204ENST00000461426 FAM182BQ5T319 152 aa36.23■■■■□ 3.39
SIGMAR1-204ENST00000461426 NPC1L1Q9UHC9 1359 aa36.23■■■■□ 3.39
SIGMAR1-204ENST00000461426 PARP4Q9UKK3 1724 aaKnown RBP36.21■■■■□ 3.39
SIGMAR1-204ENST00000461426 PEAK1Q9H792 1746 aa36.2■■■■□ 3.39
SIGMAR1-204ENST00000461426 CC2D1BQ5T0F9 858 aaKnown RBP36.2■■■■□ 3.39
SIGMAR1-204ENST00000461426 NBPF6Q5VWK0 638 aa36.2■■■■□ 3.39
SIGMAR1-204ENST00000461426 NBPF4Q96M43 638 aa36.2■■■■□ 3.39
SIGMAR1-204ENST00000461426 MAP2P11137 1827 aaKnown RBP36.2■■■■□ 3.38
SIGMAR1-204ENST00000461426 FAM208AQ9UK61 1670 aaKnown RBP36.19■■■■□ 3.38
SIGMAR1-204ENST00000461426 SF3B2Q13435 895 aaKnown RBP36.17■■■■□ 3.38
SIGMAR1-204ENST00000461426 MARCH10Q8NA82 808 aaPredicted RBP36.12■■■■□ 3.37
SIGMAR1-204ENST00000461426 WNK3Q9BYP7 1800 aa36.11■■■■□ 3.37
SIGMAR1-204ENST00000461426 LRRC37A3O60309 1634 aa36.11■■■■□ 3.37
SIGMAR1-204ENST00000461426 OVOS2A0A0G2JMS6 1433 aa36.08■■■■□ 3.37
SIGMAR1-204ENST00000461426 EIF4A2Q14240 407 aaKnown RBP36.08■■■■□ 3.37
SIGMAR1-204ENST00000461426 USHBP1Q8N6Y0 703 aa36.08■■■■□ 3.37
SIGMAR1-204ENST00000461426 RAPGEF4Q8WZA2 1011 aa36.08■■■■□ 3.37
SIGMAR1-204ENST00000461426 TNS2Q63HR2 1409 aa36.08■■■■□ 3.37
SIGMAR1-204ENST00000461426 TRIM37O94972 964 aa36.06■■■■□ 3.36
SIGMAR1-204ENST00000461426 EYA1Q99502 592 aa36.06■■■■□ 3.36
SIGMAR1-204ENST00000461426 MTHFSP49914 203 aa36.05■■■■□ 3.36
SIGMAR1-204ENST00000461426 CNGB1Q14028 1251 aaPredicted RBP36.05■■■■□ 3.36
SIGMAR1-204ENST00000461426 BCL9O00512 1426 aa36.03■■■■□ 3.36
SIGMAR1-204ENST00000461426 RGPD2P0DJD1 1756 aa36.03■■■■□ 3.36
SIGMAR1-204ENST00000461426 TATP17735 454 aaPredicted RBP36.03■■■■□ 3.36
SIGMAR1-204ENST00000461426 ZCRB1Q8TBF4 217 aaKnown RBP36.03■■■■□ 3.36
SIGMAR1-204ENST00000461426 BAG6P46379 1132 aa36.01■■■■□ 3.36
SIGMAR1-204ENST00000461426 DEFB132Q7Z7B7 95 aa35.99■■■■□ 3.35
SIGMAR1-204ENST00000461426 DDX54Q8TDD1 881 aaKnown RBP35.99■■■■□ 3.35
SIGMAR1-204ENST00000461426 NCAPD2Q15021 1401 aa35.98■■■■□ 3.35
SIGMAR1-204ENST00000461426 MEGF6O75095 1541 aa35.98■■■■□ 3.35
SIGMAR1-204ENST00000461426 DDX10Q13206 875 aaKnown RBP35.96■■■■□ 3.35
SIGMAR1-204ENST00000461426 APBA3O96018 575 aa35.95■■■■□ 3.35
SIGMAR1-204ENST00000461426 IGSF1Q8N6C5 1336 aa35.94■■■■□ 3.34
SIGMAR1-204ENST00000461426 IL13P35225 146 aa35.94■■■■□ 3.34
SIGMAR1-204ENST00000461426 BCL11BQ9C0K0 894 aaPredicted RBP35.94■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms