RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 LTN1O94822 1766 aa24.58■■□□□ 1.53
PLOD3-209ENST00000460475 RGPD5Q99666 1765 aa24.58■■□□□ 1.53
PLOD3-209ENST00000460475 ZBTB7CA1YPR0 619 aa24.58■■□□□ 1.53
PLOD3-209ENST00000460475 LARP1Q6PKG0 1096 aaKnown RBP24.57■■□□□ 1.52
PLOD3-209ENST00000460475 SEPT12Q8IYM1 358 aa24.57■■□□□ 1.52
PLOD3-209ENST00000460475 KIF7Q2M1P5 1343 aa24.57■■□□□ 1.52
PLOD3-209ENST00000460475 GGNBP2Q9H3C7 697 aa24.56■■□□□ 1.52
PLOD3-209ENST00000460475 BRWD3Q6RI45 1802 aa24.56■■□□□ 1.52
PLOD3-209ENST00000460475 CRB1P82279 1406 aa24.54■■□□□ 1.52
PLOD3-209ENST00000460475 FAM98CQ17RN3 349 aaKnown RBP24.54■■□□□ 1.52
PLOD3-209ENST00000460475 PANK3Q9H999 370 aa24.54■■□□□ 1.52
PLOD3-209ENST00000460475 THSD7AQ9UPZ6 1657 aa24.53■■□□□ 1.52
PLOD3-209ENST00000460475 BARGINQ6ZT62 677 aa24.53■■□□□ 1.52
PLOD3-209ENST00000460475 EP400Q96L91 3159 aa24.53■■□□□ 1.52
PLOD3-209ENST00000460475 CGNL1Q0VF96 1302 aa24.53■■□□□ 1.52
PLOD3-209ENST00000460475 WDR17Q8IZU2 1322 aa24.53■■□□□ 1.52
PLOD3-209ENST00000460475 THRAP3Q9Y2W1 955 aaKnown RBP24.52■■□□□ 1.52
PLOD3-209ENST00000460475 TCP11L2Q8N4U5 519 aa24.51■■□□□ 1.51
PLOD3-209ENST00000460475 UPF1Q92900 1129 aaKnown RBP eCLIP24.5■■□□□ 1.51
PLOD3-209ENST00000460475 IP6K1Q92551 441 aa24.49■■□□□ 1.51
PLOD3-209ENST00000460475 MAP3K19Q56UN5 1328 aa24.49■■□□□ 1.51
PLOD3-209ENST00000460475 FBLN1P23142 703 aa24.48■■□□□ 1.51
PLOD3-209ENST00000460475 BLMP54132 1417 aaPredicted RBP24.48■■□□□ 1.51
PLOD3-209ENST00000460475 CCDC7Q96M83 1385 aa24.48■■□□□ 1.51
PLOD3-209ENST00000460475 USP35Q9P2H5 1018 aa24.48■■□□□ 1.51
PLOD3-209ENST00000460475 ERBB3P21860 1342 aa24.47■■□□□ 1.51
PLOD3-209ENST00000460475 TOM1L2Q6ZVM7 507 aa24.47■■□□□ 1.51
PLOD3-209ENST00000460475 WASHC2AQ641Q2 1341 aa24.46■■□□□ 1.51
PLOD3-209ENST00000460475 KRT27Q7Z3Y8 459 aa24.46■■□□□ 1.51
PLOD3-209ENST00000460475 CARD10Q9BWT7 1032 aa24.46■■□□□ 1.51
PLOD3-209ENST00000460475 ANKRD26Q9UPS8 1709 aa24.45■■□□□ 1.5
PLOD3-209ENST00000460475 RTL1A6NKG5 1358 aa24.44■■□□□ 1.5
PLOD3-209ENST00000460475 A0A0G2JS52 829 aa24.44■■□□□ 1.5
PLOD3-209ENST00000460475 MYT1Q01538 1121 aa24.44■■□□□ 1.5
PLOD3-209ENST00000460475 KIF24Q5T7B8 1368 aa24.43■■□□□ 1.5
PLOD3-209ENST00000460475 CSB-PGBD3P0DP91 1061 aa24.43■■□□□ 1.5
PLOD3-209ENST00000460475 HOXC9P31274 260 aa24.43■■□□□ 1.5
PLOD3-209ENST00000460475 RRS1Q15050 365 aaKnown RBP24.43■■□□□ 1.5
PLOD3-209ENST00000460475 NSD2O96028 1365 aa24.42■■□□□ 1.5
PLOD3-209ENST00000460475 PARP4Q9UKK3 1724 aaKnown RBP24.42■■□□□ 1.5
PLOD3-209ENST00000460475 AMPHP49418 695 aa24.42■■□□□ 1.5
PLOD3-209ENST00000460475 ANKRD24Q8TF21 1146 aa24.42■■□□□ 1.5
PLOD3-209ENST00000460475 KNSTRNQ9Y448 316 aa24.41■■□□□ 1.5
PLOD3-209ENST00000460475 PER1O15534 1290 aaPredicted RBP24.4■■□□□ 1.5
PLOD3-209ENST00000460475 MAP2P11137 1827 aaKnown RBP24.4■■□□□ 1.5
PLOD3-209ENST00000460475 WNK3Q9BYP7 1800 aa24.4■■□□□ 1.5
PLOD3-209ENST00000460475 CDCA7Q9BWT1 371 aaPredicted RBP24.39■■□□□ 1.49
PLOD3-209ENST00000460475 FAM208AQ9UK61 1670 aaKnown RBP24.39■■□□□ 1.49
PLOD3-209ENST00000460475 DISP2A7MBM2 1401 aa24.38■■□□□ 1.49
PLOD3-209ENST00000460475 PEAK1Q9H792 1746 aa24.38■■□□□ 1.49
PLOD3-209ENST00000460475 AMER1Q5JTC6 1135 aaPredicted RBP24.37■■□□□ 1.49
PLOD3-209ENST00000460475 CCDC125Q86Z20 511 aa24.37■■□□□ 1.49
PLOD3-209ENST00000460475 NLRP2Q9NX02 1062 aa24.37■■□□□ 1.49
PLOD3-209ENST00000460475 INSRP06213 1382 aa24.36■■□□□ 1.49
PLOD3-209ENST00000460475 FLT4P35916 1363 aa24.36■■□□□ 1.49
PLOD3-209ENST00000460475 EMILIN1Q9Y6C2 1016 aa24.35■■□□□ 1.49
PLOD3-209ENST00000460475 PDE3BQ13370 1112 aa24.34■■□□□ 1.49
PLOD3-209ENST00000460475 LRRC37A3O60309 1634 aa24.33■■□□□ 1.49
PLOD3-209ENST00000460475 HSP90AB2PQ58FF8 381 aa24.33■■□□□ 1.49
PLOD3-209ENST00000460475 POLKQ9UBT6 870 aa24.33■■□□□ 1.49
PLOD3-209ENST00000460475 LTV1Q96GA3 475 aaPredicted RBP24.32■■□□□ 1.48
PLOD3-209ENST00000460475 ZEB1P37275 1124 aaPredicted RBP24.31■■□□□ 1.48
PLOD3-209ENST00000460475 DDB1Q16531 1140 aa24.31■■□□□ 1.48
PLOD3-209ENST00000460475 FAM182BQ5T319 152 aa24.31■■□□□ 1.48
PLOD3-209ENST00000460475 RGPD2P0DJD1 1756 aa24.31■■□□□ 1.48
PLOD3-209ENST00000460475 NPC1L1Q9UHC9 1359 aa24.3■■□□□ 1.48
PLOD3-209ENST00000460475 FAM196AQ6ZSG2 479 aa24.3■■□□□ 1.48
PLOD3-209ENST00000460475 MORC1Q86VD1 984 aa24.3■■□□□ 1.48
PLOD3-209ENST00000460475 SMG6Q86US8 1419 aaKnown RBP24.28■■□□□ 1.48
PLOD3-209ENST00000460475 IL2RBP14784 551 aa24.28■■□□□ 1.48
PLOD3-209ENST00000460475 TNNT2P45379 298 aaPredicted RBP24.28■■□□□ 1.48
PLOD3-209ENST00000460475 NBPF6Q5VWK0 638 aa24.27■■□□□ 1.48
PLOD3-209ENST00000460475 NBPF4Q96M43 638 aa24.27■■□□□ 1.48
PLOD3-209ENST00000460475 EXOC5O00471 708 aa24.26■■□□□ 1.47
PLOD3-209ENST00000460475 PPM1GO15355 546 aaPredicted RBP24.26■■□□□ 1.47
PLOD3-209ENST00000460475 TNS2Q63HR2 1409 aa24.25■■□□□ 1.47
PLOD3-209ENST00000460475 MARCH10Q8NA82 808 aaPredicted RBP24.24■■□□□ 1.47
PLOD3-209ENST00000460475 OVOS2A0A0G2JMS6 1433 aa24.24■■□□□ 1.47
PLOD3-209ENST00000460475 BCL9O00512 1426 aa24.24■■□□□ 1.47
PLOD3-209ENST00000460475 RGPD1P0DJD0 1748 aa24.24■■□□□ 1.47
PLOD3-209ENST00000460475 NCAPD2Q15021 1401 aa24.21■■□□□ 1.47
PLOD3-209ENST00000460475 SBF2Q86WG5 1849 aa24.2■■□□□ 1.46
PLOD3-209ENST00000460475 SF3B2Q13435 895 aaKnown RBP24.2■■□□□ 1.46
PLOD3-209ENST00000460475 TNS1Q9HBL0 1735 aaKnown RBP24.2■■□□□ 1.46
PLOD3-209ENST00000460475 CC2D1BQ5T0F9 858 aaKnown RBP24.19■■□□□ 1.46
PLOD3-209ENST00000460475 EIF4A2Q14240 407 aaKnown RBP24.18■■□□□ 1.46
PLOD3-209ENST00000460475 MEGF6O75095 1541 aa24.17■■□□□ 1.46
PLOD3-209ENST00000460475 TRIM37O94972 964 aa24.17■■□□□ 1.46
PLOD3-209ENST00000460475 USHBP1Q8N6Y0 703 aa24.17■■□□□ 1.46
PLOD3-209ENST00000460475 EYA1Q99502 592 aa24.16■■□□□ 1.46
PLOD3-209ENST00000460475 DEFB132Q7Z7B7 95 aa24.15■■□□□ 1.46
PLOD3-209ENST00000460475 BAG6P46379 1132 aa24.14■■□□□ 1.45
PLOD3-209ENST00000460475 RAPGEF4Q8WZA2 1011 aa24.14■■□□□ 1.45
PLOD3-209ENST00000460475 ZCRB1Q8TBF4 217 aaKnown RBP24.13■■□□□ 1.45
PLOD3-209ENST00000460475 SHANK3Q9BYB0 1731 aa24.13■■□□□ 1.45
PLOD3-209ENST00000460475 TATP17735 454 aaPredicted RBP24.12■■□□□ 1.45
PLOD3-209ENST00000460475 MTHFSP49914 203 aa24.12■■□□□ 1.45
PLOD3-209ENST00000460475 IGSF1Q8N6C5 1336 aa24.11■■□□□ 1.45
PLOD3-209ENST00000460475 BCL11BQ9C0K0 894 aaPredicted RBP24.1■■□□□ 1.45
PLOD3-209ENST00000460475 KAT6BQ8WYB5 2073 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms