RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 DDB1Q16531 1140 aa11.48□□□□□ -0.57
HPS4-207ENST00000459918 QRICH2Q9H0J4 1663 aa11.48□□□□□ -0.57
HPS4-207ENST00000459918 CASZ1Q86V15 1759 aa11.47□□□□□ -0.57
HPS4-207ENST00000459918 PEAK1Q9H792 1746 aa11.47□□□□□ -0.57
HPS4-207ENST00000459918 KIAA1210Q9ULL0 1709 aa11.47□□□□□ -0.57
HPS4-207ENST00000459918 GCP02774 474 aa11.47□□□□□ -0.57
HPS4-207ENST00000459918 STAC3Q96MF2 364 aa11.47□□□□□ -0.57
HPS4-207ENST00000459918 USP19O94966 1318 aa11.46□□□□□ -0.57
HPS4-207ENST00000459918 ZBTB7AO95365 584 aa11.46□□□□□ -0.57
HPS4-207ENST00000459918 CSB-PGBD3P0DP91 1061 aa11.45□□□□□ -0.58
HPS4-207ENST00000459918 NLRP6P59044 892 aa11.45□□□□□ -0.58
HPS4-207ENST00000459918 RGPD5Q99666 1765 aa11.44□□□□□ -0.58
HPS4-207ENST00000459918 PLEKHG3A1L390 1219 aa11.44□□□□□ -0.58
HPS4-207ENST00000459918 SOX12O15370 315 aa11.44□□□□□ -0.58
HPS4-207ENST00000459918 CABP2Q9NPB3 220 aa11.44□□□□□ -0.58
HPS4-207ENST00000459918 STK32BQ9NY57 414 aa11.44□□□□□ -0.58
HPS4-207ENST00000459918 ANO8Q9HCE9 1232 aaPredicted RBP11.43□□□□□ -0.58
HPS4-207ENST00000459918 ATF5Q9Y2D1 282 aaPredicted RBP11.43□□□□□ -0.58
HPS4-207ENST00000459918 PIK3C2AO00443 1686 aa11.43□□□□□ -0.58
HPS4-207ENST00000459918 CHD4Q14839 1912 aa11.43□□□□□ -0.58
HPS4-207ENST00000459918 CENPJQ9HC77 1338 aaPredicted RBP11.42□□□□□ -0.58
HPS4-207ENST00000459918 PLSCR1O15162 318 aa11.42□□□□□ -0.58
HPS4-207ENST00000459918 AATKQ6ZMQ8 1374 aa11.41□□□□□ -0.58
HPS4-207ENST00000459918 SLIT3O75094 1523 aa11.41□□□□□ -0.58
HPS4-207ENST00000459918 SENP3-EIF4A1A0A087X0R7 540 aa11.41□□□□□ -0.58
HPS4-207ENST00000459918 CDCA7Q9BWT1 371 aaPredicted RBP11.41□□□□□ -0.58
HPS4-207ENST00000459918 PDGFDQ9GZP0 370 aaPredicted RBP11.41□□□□□ -0.58
HPS4-207ENST00000459918 USP6P35125 1406 aa11.41□□□□□ -0.58
HPS4-207ENST00000459918 WDR17Q8IZU2 1322 aa11.4□□□□□ -0.58
HPS4-207ENST00000459918 KLHL34Q8N239 644 aa11.4□□□□□ -0.58
HPS4-207ENST00000459918 FHDC1Q9C0D6 1143 aaPredicted RBP11.4□□□□□ -0.58
HPS4-207ENST00000459918 CPSF1Q10570 1443 aaKnown RBP11.4□□□□□ -0.58
HPS4-207ENST00000459918 BRD4O60885 1362 aaPredicted RBP11.4□□□□□ -0.59
HPS4-207ENST00000459918 COL18A1P39060 1754 aa11.39□□□□□ -0.59
HPS4-207ENST00000459918 TXNRD1Q16881 649 aa11.39□□□□□ -0.59
HPS4-207ENST00000459918 PTF1AQ7RTS3 328 aa11.39□□□□□ -0.59
HPS4-207ENST00000459918 ZNF784Q8NCA9 323 aaPredicted RBP11.39□□□□□ -0.59
HPS4-207ENST00000459918 CABP1Q9NZU7 370 aa11.39□□□□□ -0.59
HPS4-207ENST00000459918 UTRNP46939 3433 aa11.39□□□□□ -0.59
HPS4-207ENST00000459918 NHSQ6T4R5 1651 aa11.39□□□□□ -0.59
HPS4-207ENST00000459918 KAT6BQ8WYB5 2073 aa11.39□□□□□ -0.59
HPS4-207ENST00000459918 EXOC5O00471 708 aa11.38□□□□□ -0.59
HPS4-207ENST00000459918 NBPF1Q3BBV0 1214 aa11.38□□□□□ -0.59
HPS4-207ENST00000459918 MARCH10Q8NA82 808 aaPredicted RBP11.38□□□□□ -0.59
HPS4-207ENST00000459918 TRPM1Q7Z4N2 1603 aa11.38□□□□□ -0.59
HPS4-207ENST00000459918 SLC15A2Q16348 729 aa11.37□□□□□ -0.59
HPS4-207ENST00000459918 KCNH5Q8NCM2 988 aa11.37□□□□□ -0.59
HPS4-207ENST00000459918 MTFR1LQ9H019 292 aa11.37□□□□□ -0.59
HPS4-207ENST00000459918 EVC2Q86UK5 1308 aa11.36□□□□□ -0.59
HPS4-207ENST00000459918 LTN1O94822 1766 aa11.36□□□□□ -0.59
HPS4-207ENST00000459918 PTGER2P43116 358 aa11.36□□□□□ -0.59
HPS4-207ENST00000459918 PELP1Q8IZL8 1130 aaKnown RBP11.36□□□□□ -0.59
HPS4-207ENST00000459918 ACSBG1Q96GR2 724 aa11.36□□□□□ -0.59
HPS4-207ENST00000459918 SYT17Q9BSW7 474 aa11.36□□□□□ -0.59
HPS4-207ENST00000459918 SPINK5Q9NQ38 1064 aaPredicted RBP11.36□□□□□ -0.59
HPS4-207ENST00000459918 TNS2Q63HR2 1409 aa11.35□□□□□ -0.59
HPS4-207ENST00000459918 BTAF1O14981 1849 aa11.35□□□□□ -0.59
HPS4-207ENST00000459918 SLC4A2P04920 1241 aa11.35□□□□□ -0.59
HPS4-207ENST00000459918 GPR162Q16538 588 aa11.35□□□□□ -0.59
HPS4-207ENST00000459918 ARXQ96QS3 562 aa11.35□□□□□ -0.59
HPS4-207ENST00000459918 AXIN2Q9Y2T1 843 aa11.35□□□□□ -0.59
HPS4-207ENST00000459918 CCDC7Q96M83 1385 aa11.35□□□□□ -0.59
HPS4-207ENST00000459918 PROM2Q8N271 834 aa11.34□□□□□ -0.59
HPS4-207ENST00000459918 CARD10Q9BWT7 1032 aa11.34□□□□□ -0.59
HPS4-207ENST00000459918 ABCC6O95255 1503 aa11.34□□□□□ -0.59
HPS4-207ENST00000459918 BCL9O00512 1426 aa11.34□□□□□ -0.59
HPS4-207ENST00000459918 NLRP2Q9NX02 1062 aa11.33□□□□□ -0.6
HPS4-207ENST00000459918 KTN1Q86UP2 1357 aaKnown RBP11.32□□□□□ -0.6
HPS4-207ENST00000459918 GIGYF1O75420 1035 aaPredicted RBP11.32□□□□□ -0.6
HPS4-207ENST00000459918 C1QTNF8P60827 252 aa11.32□□□□□ -0.6
HPS4-207ENST00000459918 ARHGEF25Q86VW2 580 aa11.32□□□□□ -0.6
HPS4-207ENST00000459918 TTC21BQ7Z4L5 1316 aa11.32□□□□□ -0.6
HPS4-207ENST00000459918 TTC21AQ8NDW8 1320 aa11.32□□□□□ -0.6
HPS4-207ENST00000459918 MON2Q7Z3U7 1717 aa11.32□□□□□ -0.6
HPS4-207ENST00000459918 PAPPAQ13219 1627 aa11.31□□□□□ -0.6
HPS4-207ENST00000459918 NFAT5O94916 1531 aa11.31□□□□□ -0.6
HPS4-207ENST00000459918 POLD1P28340 1107 aa11.31□□□□□ -0.6
HPS4-207ENST00000459918 ZNF692Q9BU19 519 aaPredicted RBP11.31□□□□□ -0.6
HPS4-207ENST00000459918 CAPN15O75808 1086 aa11.3□□□□□ -0.6
HPS4-207ENST00000459918 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.3□□□□□ -0.6
HPS4-207ENST00000459918 ROCK2O75116 1388 aaKnown RBP11.29□□□□□ -0.6
HPS4-207ENST00000459918 IL2RBP14784 551 aa11.29□□□□□ -0.6
HPS4-207ENST00000459918 DSG3P32926 999 aa11.29□□□□□ -0.6
HPS4-207ENST00000459918 SYTL4Q96C24 671 aaPredicted RBP11.29□□□□□ -0.6
HPS4-207ENST00000459918 QSER1Q2KHR3 1735 aa11.29□□□□□ -0.6
HPS4-207ENST00000459918 GOLGB1Q14789 3259 aaKnown RBP11.29□□□□□ -0.6
HPS4-207ENST00000459918 DOT1LQ8TEK3 1739 aa11.28□□□□□ -0.6
HPS4-207ENST00000459918 TUBGCP6Q96RT7 1819 aa11.28□□□□□ -0.6
HPS4-207ENST00000459918 FAM208AQ9UK61 1670 aaKnown RBP11.27□□□□□ -0.6
HPS4-207ENST00000459918 ZNF827Q17R98 1081 aa11.27□□□□□ -0.61
HPS4-207ENST00000459918 SGIP1Q9BQI5 828 aa11.27□□□□□ -0.61
HPS4-207ENST00000459918 TFCP2L1Q9NZI6 479 aa11.27□□□□□ -0.61
HPS4-207ENST00000459918 ERBB3P21860 1342 aa11.27□□□□□ -0.61
HPS4-207ENST00000459918 MAP3K5Q99683 1374 aa11.27□□□□□ -0.61
HPS4-207ENST00000459918 DDX54Q8TDD1 881 aaKnown RBP11.26□□□□□ -0.61
HPS4-207ENST00000459918 TMC1Q8TDI8 760 aa11.26□□□□□ -0.61
HPS4-207ENST00000459918 ANKRD24Q8TF21 1146 aa11.26□□□□□ -0.61
HPS4-207ENST00000459918 USP54Q70EL1 1684 aa11.25□□□□□ -0.61
HPS4-207ENST00000459918 LTV1Q96GA3 475 aaPredicted RBP11.25□□□□□ -0.61
HPS4-207ENST00000459918 HDGFL2Q7Z4V5 671 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms