RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 C11orf95C9JLR9 678 aaPredicted RBP20.82■□□□□ 0.92
UPF3AP2-201ENST00000457924 SPDYE6P0CI01 402 aa20.82■□□□□ 0.92
UPF3AP2-201ENST00000457924 SPDYE2Q495Y8 402 aa20.82■□□□□ 0.92
UPF3AP2-201ENST00000457924 RBM42Q9BTD8 480 aaKnown RBP20.81■□□□□ 0.92
UPF3AP2-201ENST00000457924 COL5A2P05997 1499 aaPredicted RBP20.81■□□□□ 0.92
UPF3AP2-201ENST00000457924 CRB1P82279 1406 aa20.79■□□□□ 0.92
UPF3AP2-201ENST00000457924 NBPF1Q3BBV0 1214 aa20.79■□□□□ 0.92
UPF3AP2-201ENST00000457924 BRD4O60885 1362 aaPredicted RBP20.79■□□□□ 0.92
UPF3AP2-201ENST00000457924 ZBTB7CA1YPR0 619 aa20.78■□□□□ 0.92
UPF3AP2-201ENST00000457924 SPDYE4A6NLX3 237 aa20.78■□□□□ 0.92
UPF3AP2-201ENST00000457924 CENPJQ9HC77 1338 aaPredicted RBP20.78■□□□□ 0.92
UPF3AP2-201ENST00000457924 FKBP8Q14318 412 aa20.77■□□□□ 0.92
UPF3AP2-201ENST00000457924 SPON1Q9HCB6 807 aa20.77■□□□□ 0.92
UPF3AP2-201ENST00000457924 CABP2Q9NPB3 220 aa20.77■□□□□ 0.92
UPF3AP2-201ENST00000457924 PPP1R1BQ9UD71 204 aaPredicted RBP20.77■□□□□ 0.92
UPF3AP2-201ENST00000457924 OVOS2A0A0G2JMS6 1433 aa20.77■□□□□ 0.91
UPF3AP2-201ENST00000457924 OVOS2A0A0J9YW53 1432 aa20.77■□□□□ 0.91
UPF3AP2-201ENST00000457924 OVOS2Q6IE36 1432 aa20.77■□□□□ 0.91
UPF3AP2-201ENST00000457924 NLRP6P59044 892 aa20.75■□□□□ 0.91
UPF3AP2-201ENST00000457924 QRICH2Q9H0J4 1663 aa20.74■□□□□ 0.91
UPF3AP2-201ENST00000457924 KCNQ2O43526 872 aa20.74■□□□□ 0.91
UPF3AP2-201ENST00000457924 YY1P25490 414 aa20.74■□□□□ 0.91
UPF3AP2-201ENST00000457924 RGPD3A6NKT7 1758 aaPredicted RBP20.74■□□□□ 0.91
UPF3AP2-201ENST00000457924 RGPD4Q7Z3J3 1758 aa20.74■□□□□ 0.91
UPF3AP2-201ENST00000457924 AATKQ6ZMQ8 1374 aa20.73■□□□□ 0.91
UPF3AP2-201ENST00000457924 PEAK1Q9H792 1746 aa20.73■□□□□ 0.91
UPF3AP2-201ENST00000457924 USP6P35125 1406 aa20.73■□□□□ 0.91
UPF3AP2-201ENST00000457924 DDB1Q16531 1140 aa20.73■□□□□ 0.91
UPF3AP2-201ENST00000457924 TOM1L2Q6ZVM7 507 aa20.73■□□□□ 0.91
UPF3AP2-201ENST00000457924 CABP1Q9NZU7 370 aa20.73■□□□□ 0.91
UPF3AP2-201ENST00000457924 SBF2Q86WG5 1849 aa20.73■□□□□ 0.91
UPF3AP2-201ENST00000457924 LRRC37A3O60309 1634 aa20.72■□□□□ 0.91
UPF3AP2-201ENST00000457924 ZNF692Q9BU19 519 aaPredicted RBP20.72■□□□□ 0.91
UPF3AP2-201ENST00000457924 SLIT3O75094 1523 aa20.72■□□□□ 0.91
UPF3AP2-201ENST00000457924 PLSCR1O15162 318 aa20.71■□□□□ 0.91
UPF3AP2-201ENST00000457924 NINLQ9Y2I6 1382 aa20.7■□□□□ 0.9
UPF3AP2-201ENST00000457924 BCL11BQ9C0K0 894 aaPredicted RBP20.69■□□□□ 0.9
UPF3AP2-201ENST00000457924 SSUH2Q9Y2M2 353 aa20.69■□□□□ 0.9
UPF3AP2-201ENST00000457924 WNK3Q9BYP7 1800 aa20.69■□□□□ 0.9
UPF3AP2-201ENST00000457924 COL18A1P39060 1754 aa20.68■□□□□ 0.9
UPF3AP2-201ENST00000457924 CDCA7Q9BWT1 371 aaPredicted RBP20.68■□□□□ 0.9
UPF3AP2-201ENST00000457924 PIK3C2AO00443 1686 aa20.67■□□□□ 0.9
UPF3AP2-201ENST00000457924 WDR17Q8IZU2 1322 aa20.67■□□□□ 0.9
UPF3AP2-201ENST00000457924 AKAP12Q02952 1782 aa20.67■□□□□ 0.9
UPF3AP2-201ENST00000457924 EVC2Q86UK5 1308 aa20.66■□□□□ 0.9
UPF3AP2-201ENST00000457924 AXIN2Q9Y2T1 843 aa20.65■□□□□ 0.9
UPF3AP2-201ENST00000457924 CPSF1Q10570 1443 aaKnown RBP20.64■□□□□ 0.89
UPF3AP2-201ENST00000457924 MARCH10Q8NA82 808 aaPredicted RBP20.64■□□□□ 0.89
UPF3AP2-201ENST00000457924 KCNH5Q8NCM2 988 aa20.64■□□□□ 0.89
UPF3AP2-201ENST00000457924 ANO8Q9HCE9 1232 aaPredicted RBP20.64■□□□□ 0.89
UPF3AP2-201ENST00000457924 CASZ1Q86V15 1759 aa20.64■□□□□ 0.89
UPF3AP2-201ENST00000457924 CSB-PGBD3P0DP91 1061 aa20.63■□□□□ 0.89
UPF3AP2-201ENST00000457924 PTF1AQ7RTS3 328 aa20.63■□□□□ 0.89
UPF3AP2-201ENST00000457924 RGPD5Q99666 1765 aa20.63■□□□□ 0.89
UPF3AP2-201ENST00000457924 BCL9O00512 1426 aa20.62■□□□□ 0.89
UPF3AP2-201ENST00000457924 ARHGEF25Q86VW2 580 aa20.62■□□□□ 0.89
UPF3AP2-201ENST00000457924 TRPM1Q7Z4N2 1603 aa20.62■□□□□ 0.89
UPF3AP2-201ENST00000457924 SOX12O15370 315 aa20.61■□□□□ 0.89
UPF3AP2-201ENST00000457924 CARD10Q9BWT7 1032 aa20.61■□□□□ 0.89
UPF3AP2-201ENST00000457924 TTC21BQ7Z4L5 1316 aa20.6■□□□□ 0.89
UPF3AP2-201ENST00000457924 PROM2Q8N271 834 aa20.6■□□□□ 0.89
UPF3AP2-201ENST00000457924 EXOC5O00471 708 aa20.59■□□□□ 0.89
UPF3AP2-201ENST00000457924 TTC21AQ8NDW8 1320 aa20.58■□□□□ 0.89
UPF3AP2-201ENST00000457924 ZBTB7AO95365 584 aa20.58■□□□□ 0.89
UPF3AP2-201ENST00000457924 L3MBTL2Q969R5 705 aa20.58■□□□□ 0.89
UPF3AP2-201ENST00000457924 AKT1S1Q96B36 256 aa20.58■□□□□ 0.89
UPF3AP2-201ENST00000457924 PDGFDQ9GZP0 370 aaPredicted RBP20.58■□□□□ 0.89
UPF3AP2-201ENST00000457924 STK32BQ9NY57 414 aa20.58■□□□□ 0.89
UPF3AP2-201ENST00000457924 TXNRD1Q16881 649 aa20.57■□□□□ 0.88
UPF3AP2-201ENST00000457924 CCDC7Q96M83 1385 aa20.56■□□□□ 0.88
UPF3AP2-201ENST00000457924 MYOM1P52179 1685 aa20.55■□□□□ 0.88
UPF3AP2-201ENST00000457924 SLC15A2Q16348 729 aa20.54■□□□□ 0.88
UPF3AP2-201ENST00000457924 ROCK2O75116 1388 aaKnown RBP20.54■□□□□ 0.88
UPF3AP2-201ENST00000457924 KTN1Q86UP2 1357 aaKnown RBP20.54■□□□□ 0.88
UPF3AP2-201ENST00000457924 NFAT5O94916 1531 aa20.53■□□□□ 0.88
UPF3AP2-201ENST00000457924 ABCC6O95255 1503 aa20.53■□□□□ 0.88
UPF3AP2-201ENST00000457924 PTGER2P43116 358 aa20.53■□□□□ 0.88
UPF3AP2-201ENST00000457924 TNS2Q63HR2 1409 aa20.52■□□□□ 0.87
UPF3AP2-201ENST00000457924 MTFR1LQ9H019 292 aa20.5■□□□□ 0.87
UPF3AP2-201ENST00000457924 NHSQ6T4R5 1651 aa20.5■□□□□ 0.87
UPF3AP2-201ENST00000457924 MON2Q7Z3U7 1717 aa20.5■□□□□ 0.87
UPF3AP2-201ENST00000457924 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.48■□□□□ 0.87
UPF3AP2-201ENST00000457924 SYT17Q9BSW7 474 aa20.48■□□□□ 0.87
UPF3AP2-201ENST00000457924 FHDC1Q9C0D6 1143 aaPredicted RBP20.48■□□□□ 0.87
UPF3AP2-201ENST00000457924 ACSBG1Q96GR2 724 aa20.47■□□□□ 0.87
UPF3AP2-201ENST00000457924 SIN3AQ96ST3 1273 aa20.47■□□□□ 0.87
UPF3AP2-201ENST00000457924 NLRP2Q9NX02 1062 aa20.47■□□□□ 0.87
UPF3AP2-201ENST00000457924 KAT6BQ8WYB5 2073 aa20.46■□□□□ 0.87
UPF3AP2-201ENST00000457924 IL2RBP14784 551 aa20.46■□□□□ 0.87
UPF3AP2-201ENST00000457924 ERBB3P21860 1342 aa20.46■□□□□ 0.87
UPF3AP2-201ENST00000457924 LTN1O94822 1766 aa20.46■□□□□ 0.87
UPF3AP2-201ENST00000457924 USP31Q70CQ4 1352 aa20.46■□□□□ 0.87
UPF3AP2-201ENST00000457924 USP54Q70EL1 1684 aa20.45■□□□□ 0.86
UPF3AP2-201ENST00000457924 NEUROD1Q13562 356 aa20.45■□□□□ 0.86
UPF3AP2-201ENST00000457924 NME9Q86XW9 330 aa20.43■□□□□ 0.86
UPF3AP2-201ENST00000457924 ZNF784Q8NCA9 323 aaPredicted RBP20.43■□□□□ 0.86
UPF3AP2-201ENST00000457924 SGIP1Q9BQI5 828 aa20.43■□□□□ 0.86
UPF3AP2-201ENST00000457924 BTAF1O14981 1849 aa20.43■□□□□ 0.86
UPF3AP2-201ENST00000457924 CHD4Q14839 1912 aa20.43■□□□□ 0.86
UPF3AP2-201ENST00000457924 ARXQ96QS3 562 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms