RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 CGNL1Q0VF96 1302 aa11.74□□□□□ -0.53
SP140-207ENST00000456542 SPATA31A5Q5VU36 1347 aa11.74□□□□□ -0.53
SP140-207ENST00000456542 SPATA31A7Q8IWB4 1347 aa11.74□□□□□ -0.53
SP140-207ENST00000456542 SOX12O15370 315 aa11.73□□□□□ -0.53
SP140-207ENST00000456542 CCDC9Q9Y3X0 531 aaKnown RBP11.73□□□□□ -0.53
SP140-207ENST00000456542 BRWD3Q6RI45 1802 aa11.72□□□□□ -0.53
SP140-207ENST00000456542 THSD7AQ9UPZ6 1657 aa11.72□□□□□ -0.53
SP140-207ENST00000456542 CCDC7Q96M83 1385 aa11.72□□□□□ -0.53
SP140-207ENST00000456542 ONECUT3O60422 494 aaPredicted RBP11.72□□□□□ -0.53
SP140-207ENST00000456542 GGNBP2Q9H3C7 697 aa11.72□□□□□ -0.53
SP140-207ENST00000456542 PANK3Q9H999 370 aa11.72□□□□□ -0.53
SP140-207ENST00000456542 STRN4Q9NRL3 753 aa11.72□□□□□ -0.53
SP140-207ENST00000456542 BLMP54132 1417 aaPredicted RBP11.71□□□□□ -0.53
SP140-207ENST00000456542 CRB1P82279 1406 aa11.71□□□□□ -0.53
SP140-207ENST00000456542 NSD2O96028 1365 aa11.71□□□□□ -0.53
SP140-207ENST00000456542 SPATA31A1Q5TZJ5 1347 aa11.71□□□□□ -0.53
SP140-207ENST00000456542 ZBTB7CA1YPR0 619 aa11.71□□□□□ -0.53
SP140-207ENST00000456542 EVA1CP58658 441 aa11.71□□□□□ -0.53
SP140-207ENST00000456542 FAM208AQ9UK61 1670 aaKnown RBP11.71□□□□□ -0.54
SP140-207ENST00000456542 RTL1A6NKG5 1358 aa11.7□□□□□ -0.54
SP140-207ENST00000456542 WNK3Q9BYP7 1800 aa11.7□□□□□ -0.54
SP140-207ENST00000456542 WASHC2AQ641Q2 1341 aa11.7□□□□□ -0.54
SP140-207ENST00000456542 WDR17Q8IZU2 1322 aa11.7□□□□□ -0.54
SP140-207ENST00000456542 ZEB1P37275 1124 aaPredicted RBP11.7□□□□□ -0.54
SP140-207ENST00000456542 AXIN2Q9Y2T1 843 aa11.7□□□□□ -0.54
SP140-207ENST00000456542 MAP2P11137 1827 aaKnown RBP11.7□□□□□ -0.54
SP140-207ENST00000456542 KIF24Q5T7B8 1368 aa11.69□□□□□ -0.54
SP140-207ENST00000456542 LARP1Q6PKG0 1096 aaKnown RBP11.69□□□□□ -0.54
SP140-207ENST00000456542 BARGINQ6ZT62 677 aa11.69□□□□□ -0.54
SP140-207ENST00000456542 THRAP3Q9Y2W1 955 aaKnown RBP11.69□□□□□ -0.54
SP140-207ENST00000456542 ERBB3P21860 1342 aa11.68□□□□□ -0.54
SP140-207ENST00000456542 MAP3K19Q56UN5 1328 aa11.68□□□□□ -0.54
SP140-207ENST00000456542 SEPT12Q8IYM1 358 aa11.68□□□□□ -0.54
SP140-207ENST00000456542 TCP11L2Q8N4U5 519 aa11.68□□□□□ -0.54
SP140-207ENST00000456542 IP6K1Q92551 441 aa11.68□□□□□ -0.54
SP140-207ENST00000456542 KNSTRNQ9Y448 316 aa11.68□□□□□ -0.54
SP140-207ENST00000456542 PARP4Q9UKK3 1724 aaKnown RBP11.68□□□□□ -0.54
SP140-207ENST00000456542 FAM98CQ17RN3 349 aaKnown RBP11.67□□□□□ -0.54
SP140-207ENST00000456542 PEAK1Q9H792 1746 aa11.66□□□□□ -0.54
SP140-207ENST00000456542 AMPHP49418 695 aa11.66□□□□□ -0.54
SP140-207ENST00000456542 TOM1L2Q6ZVM7 507 aa11.66□□□□□ -0.54
SP140-207ENST00000456542 FLT4P35916 1363 aa11.66□□□□□ -0.54
SP140-207ENST00000456542 A0A0G2JS52 829 aa11.65□□□□□ -0.54
SP140-207ENST00000456542 PER1O15534 1290 aaPredicted RBP11.65□□□□□ -0.54
SP140-207ENST00000456542 CSB-PGBD3P0DP91 1061 aa11.65□□□□□ -0.54
SP140-207ENST00000456542 FBLN1P23142 703 aa11.65□□□□□ -0.54
SP140-207ENST00000456542 HOXC9P31274 260 aa11.65□□□□□ -0.54
SP140-207ENST00000456542 MYT1Q01538 1121 aa11.65□□□□□ -0.54
SP140-207ENST00000456542 RRS1Q15050 365 aaKnown RBP11.65□□□□□ -0.54
SP140-207ENST00000456542 CARD10Q9BWT7 1032 aa11.65□□□□□ -0.54
SP140-207ENST00000456542 USP35Q9P2H5 1018 aa11.65□□□□□ -0.54
SP140-207ENST00000456542 LRRC37A3O60309 1634 aa11.64□□□□□ -0.55
SP140-207ENST00000456542 AMER1Q5JTC6 1135 aaPredicted RBP11.64□□□□□ -0.55
SP140-207ENST00000456542 KRT27Q7Z3Y8 459 aa11.64□□□□□ -0.55
SP140-207ENST00000456542 ANKRD24Q8TF21 1146 aa11.64□□□□□ -0.55
SP140-207ENST00000456542 CDCA7Q9BWT1 371 aaPredicted RBP11.64□□□□□ -0.55
SP140-207ENST00000456542 INSRP06213 1382 aa11.64□□□□□ -0.55
SP140-207ENST00000456542 NPC1L1Q9UHC9 1359 aa11.64□□□□□ -0.55
SP140-207ENST00000456542 RGPD2P0DJD1 1756 aa11.64□□□□□ -0.55
SP140-207ENST00000456542 DISP2A7MBM2 1401 aa11.63□□□□□ -0.55
SP140-207ENST00000456542 SMG6Q86US8 1419 aaKnown RBP11.63□□□□□ -0.55
SP140-207ENST00000456542 UPF1Q92900 1129 aaKnown RBP eCLIP11.62□□□□□ -0.55
SP140-207ENST00000456542 NLRP2Q9NX02 1062 aa11.62□□□□□ -0.55
SP140-207ENST00000456542 EMILIN1Q9Y6C2 1016 aa11.62□□□□□ -0.55
SP140-207ENST00000456542 MORC1Q86VD1 984 aa11.61□□□□□ -0.55
SP140-207ENST00000456542 POLKQ9UBT6 870 aa11.61□□□□□ -0.55
SP140-207ENST00000456542 HSP90AB2PQ58FF8 381 aa11.6□□□□□ -0.55
SP140-207ENST00000456542 PDE3BQ13370 1112 aa11.59□□□□□ -0.55
SP140-207ENST00000456542 CCDC125Q86Z20 511 aa11.59□□□□□ -0.55
SP140-207ENST00000456542 LTV1Q96GA3 475 aaPredicted RBP11.59□□□□□ -0.55
SP140-207ENST00000456542 RGPD1P0DJD0 1748 aa11.59□□□□□ -0.55
SP140-207ENST00000456542 TNS2Q63HR2 1409 aa11.59□□□□□ -0.55
SP140-207ENST00000456542 PPM1GO15355 546 aaPredicted RBP11.58□□□□□ -0.56
SP140-207ENST00000456542 IL2RBP14784 551 aa11.58□□□□□ -0.56
SP140-207ENST00000456542 TNNT2P45379 298 aaPredicted RBP11.58□□□□□ -0.56
SP140-207ENST00000456542 DDB1Q16531 1140 aa11.58□□□□□ -0.56
SP140-207ENST00000456542 NCAPD2Q15021 1401 aa11.58□□□□□ -0.56
SP140-207ENST00000456542 FAM196AQ6ZSG2 479 aa11.57□□□□□ -0.56
SP140-207ENST00000456542 SBF2Q86WG5 1849 aa11.57□□□□□ -0.56
SP140-207ENST00000456542 OVOS2A0A0G2JMS6 1433 aa11.57□□□□□ -0.56
SP140-207ENST00000456542 BCL9O00512 1426 aa11.56□□□□□ -0.56
SP140-207ENST00000456542 CC2D1BQ5T0F9 858 aaKnown RBP11.56□□□□□ -0.56
SP140-207ENST00000456542 NBPF6Q5VWK0 638 aa11.56□□□□□ -0.56
SP140-207ENST00000456542 NBPF4Q96M43 638 aa11.56□□□□□ -0.56
SP140-207ENST00000456542 TNS1Q9HBL0 1735 aaKnown RBP11.56□□□□□ -0.56
SP140-207ENST00000456542 SHANK3Q9BYB0 1731 aa11.55□□□□□ -0.56
SP140-207ENST00000456542 EXOC5O00471 708 aa11.55□□□□□ -0.56
SP140-207ENST00000456542 MEGF6O75095 1541 aa11.55□□□□□ -0.56
SP140-207ENST00000456542 EP400Q96L91 3159 aa11.54□□□□□ -0.56
SP140-207ENST00000456542 FAM182BQ5T319 152 aa11.54□□□□□ -0.56
SP140-207ENST00000456542 PKD1L3Q7Z443 1732 aa11.54□□□□□ -0.56
SP140-207ENST00000456542 PLEKHG2Q9H7P9 1386 aa11.54□□□□□ -0.56
SP140-207ENST00000456542 EIF4A2Q14240 407 aaKnown RBP11.53□□□□□ -0.56
SP140-207ENST00000456542 MTHFSP49914 203 aa11.52□□□□□ -0.57
SP140-207ENST00000456542 SF3B2Q13435 895 aaKnown RBP11.52□□□□□ -0.57
SP140-207ENST00000456542 USHBP1Q8N6Y0 703 aa11.52□□□□□ -0.57
SP140-207ENST00000456542 MARCH10Q8NA82 808 aaPredicted RBP11.52□□□□□ -0.57
SP140-207ENST00000456542 RAPGEF4Q8WZA2 1011 aa11.52□□□□□ -0.57
SP140-207ENST00000456542 EYA1Q99502 592 aa11.52□□□□□ -0.57
SP140-207ENST00000456542 IGSF1Q8N6C5 1336 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms