RNA–Protein interactions for RNA: ENST00000454642.3

CDH19-202, Transcript of cadherin 19, humanhuman

TSL 5

Gene CDH19, Length 1,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-202ENST00000454642 USP17L21D6R901 530 aa9.04□□□□□ -0.96
CDH19-202ENST00000454642 USP17L18D6R9N7 530 aa9.04□□□□□ -0.96
CDH19-202ENST00000454642 USP17L22D6RA61 530 aa9.04□□□□□ -0.96
CDH19-202ENST00000454642 USP17L17D6RBQ6 530 aa9.04□□□□□ -0.96
CDH19-202ENST00000454642 USP17L19D6RCP7 530 aa9.04□□□□□ -0.96
CDH19-202ENST00000454642 USP17L20D6RJB6 530 aa9.04□□□□□ -0.96
CDH19-202ENST00000454642 USP17L24Q0WX57 530 aa9.04□□□□□ -0.96
CDH19-202ENST00000454642 NBPF14Q5TI25 921 aa9.04□□□□□ -0.96
CDH19-202ENST00000454642 ADAM32Q8TC27 787 aa9.04□□□□□ -0.96
CDH19-202ENST00000454642 ARHGAP9Q9BRR9 750 aa9.04□□□□□ -0.96
CDH19-202ENST00000454642 MMP16P51512 607 aa9.03□□□□□ -0.96
CDH19-202ENST00000454642 CCDC27Q2M243 656 aa9.03□□□□□ -0.96
CDH19-202ENST00000454642 PLPP7Q8NBV4 271 aa9.03□□□□□ -0.96
CDH19-202ENST00000454642 GPSM3Q9Y4H4 160 aa9.03□□□□□ -0.96
CDH19-202ENST00000454642 RB1CC1Q8TDY2 1594 aa9.02□□□□□ -0.97
CDH19-202ENST00000454642 FAM196BA6NMK8 535 aa9.02□□□□□ -0.97
CDH19-202ENST00000454642 LARP1Q6PKG0 1096 aaKnown RBP9.02□□□□□ -0.97
CDH19-202ENST00000454642 SND1Q7KZF4 910 aaKnown RBP eCLIP9.02□□□□□ -0.97
CDH19-202ENST00000454642 ZBTB33Q86T24 672 aa9.02□□□□□ -0.97
CDH19-202ENST00000454642 CARD14Q9BXL6 1004 aa9.02□□□□□ -0.97
CDH19-202ENST00000454642 TSGA10IPQ3SY00 556 aa9.01□□□□□ -0.97
CDH19-202ENST00000454642 PTCRAQ6ISU1 281 aaPredicted RBP9.01□□□□□ -0.97
CDH19-202ENST00000454642 GPKOWQ92917 476 aaPredicted RBP eCLIP9.01□□□□□ -0.97
CDH19-202ENST00000454642 UNC93B1Q9H1C4 597 aa9.01□□□□□ -0.97
CDH19-202ENST00000454642 MAGEB6P1A0A0J9YX57 407 aa9□□□□□ -0.97
CDH19-202ENST00000454642 PTK7Q13308 1070 aa9□□□□□ -0.97
CDH19-202ENST00000454642 B4GALNT3Q6L9W6 998 aa9□□□□□ -0.97
CDH19-202ENST00000454642 PHTF2Q8N3S3 785 aa9□□□□□ -0.97
CDH19-202ENST00000454642 ZNF594Q96JF6 807 aaPredicted RBP9□□□□□ -0.97
CDH19-202ENST00000454642 PHLDB3Q6NSJ2 640 aa9□□□□□ -0.97
CDH19-202ENST00000454642 FAM200AQ8TCP9 573 aa9□□□□□ -0.97
CDH19-202ENST00000454642 ATP5J2-PTCD1G3V325 749 aa8.99□□□□□ -0.97
CDH19-202ENST00000454642 ZNF592Q92610 1267 aa8.99□□□□□ -0.97
CDH19-202ENST00000454642 ZPR1O75312 459 aa8.98□□□□□ -0.97
CDH19-202ENST00000454642 EML3Q32P44 896 aa8.98□□□□□ -0.97
CDH19-202ENST00000454642 DZIP3Q86Y13 1208 aaKnown RBP8.98□□□□□ -0.97
CDH19-202ENST00000454642 OGFOD1Q8N543 542 aa8.98□□□□□ -0.97
CDH19-202ENST00000454642 SLAIN2Q9P270 581 aa8.98□□□□□ -0.97
CDH19-202ENST00000454642 ADH1BP00325 375 aa8.97□□□□□ -0.97
CDH19-202ENST00000454642 GNEQ9Y223 722 aaKnown RBP8.97□□□□□ -0.97
CDH19-202ENST00000454642 MCCD1P59942 119 aaPredicted RBP8.97□□□□□ -0.97
CDH19-202ENST00000454642 CLDN10P78369 228 aa8.97□□□□□ -0.97
CDH19-202ENST00000454642 KCNC4Q03721 635 aa8.97□□□□□ -0.97
CDH19-202ENST00000454642 DPYDQ12882 1025 aa8.97□□□□□ -0.97
CDH19-202ENST00000454642 AGERQ15109 404 aa8.97□□□□□ -0.97
CDH19-202ENST00000454642 SH3BP5LQ7L8J4 393 aa8.97□□□□□ -0.97
CDH19-202ENST00000454642 ANKMY2Q8IV38 441 aa8.97□□□□□ -0.97
CDH19-202ENST00000454642 MTRQ99707 1265 aa8.97□□□□□ -0.97
CDH19-202ENST00000454642 FAM69CQ0P6D2 419 aa8.96□□□□□ -0.98
CDH19-202ENST00000454642 LINC01559Q495D7 138 aa8.96□□□□□ -0.98
CDH19-202ENST00000454642 TRAF7Q6Q0C0 670 aa8.96□□□□□ -0.98
CDH19-202ENST00000454642 CCER1Q8TC90 406 aaPredicted RBP8.96□□□□□ -0.98
CDH19-202ENST00000454642 SSFA2P28290 1259 aa8.95□□□□□ -0.98
CDH19-202ENST00000454642 SCNN1AP37088 669 aa8.95□□□□□ -0.98
CDH19-202ENST00000454642 MAP7D1Q3KQU3 841 aa8.95□□□□□ -0.98
CDH19-202ENST00000454642 OXLD1Q5BKU9 147 aa8.95□□□□□ -0.98
CDH19-202ENST00000454642 BAP1Q92560 729 aa8.95□□□□□ -0.98
CDH19-202ENST00000454642 ZNF516Q92618 1163 aa8.95□□□□□ -0.98
CDH19-202ENST00000454642 CCDC85AQ96PX6 553 aaPredicted RBP8.95□□□□□ -0.98
CDH19-202ENST00000454642 DOLKQ9UPQ8 538 aa8.95□□□□□ -0.98
CDH19-202ENST00000454642 CDCA7Q9BWT1 371 aaPredicted RBP8.94□□□□□ -0.98
CDH19-202ENST00000454642 SLC6A16Q9GZN6 736 aa8.94□□□□□ -0.98
CDH19-202ENST00000454642 LZTS3O60299 673 aaPredicted RBP8.94□□□□□ -0.98
CDH19-202ENST00000454642 GIGYF1O75420 1035 aaPredicted RBP8.94□□□□□ -0.98
CDH19-202ENST00000454642 TXNDC2Q86VQ3 553 aa8.94□□□□□ -0.98
CDH19-202ENST00000454642 FOXJ1Q92949 421 aa8.94□□□□□ -0.98
CDH19-202ENST00000454642 IRX2Q9BZI1 471 aaPredicted RBP8.94□□□□□ -0.98
CDH19-202ENST00000454642 DNAAF2Q9NVR5 837 aaKnown RBP8.94□□□□□ -0.98
CDH19-202ENST00000454642 CHIC2Q9UKJ5 165 aa8.94□□□□□ -0.98
CDH19-202ENST00000454642 NOD1Q9Y239 953 aa8.94□□□□□ -0.98
CDH19-202ENST00000454642 NACADO15069 1562 aa8.93□□□□□ -0.98
CDH19-202ENST00000454642 ATP2B4P23634 1241 aa8.93□□□□□ -0.98
CDH19-202ENST00000454642 ARID4AP29374 1257 aaPredicted RBP8.92□□□□□ -0.98
CDH19-202ENST00000454642 SH3RF1Q7Z6J0 888 aa8.92□□□□□ -0.98
CDH19-202ENST00000454642 TRIM50Q86XT4 487 aa8.92□□□□□ -0.98
CDH19-202ENST00000454642 CLP1Q92989 425 aaKnown RBP8.92□□□□□ -0.98
CDH19-202ENST00000454642 KIAA1024Q9UPX6 916 aa8.92□□□□□ -0.98
CDH19-202ENST00000454642 SERPINB4P48594 390 aa8.91□□□□□ -0.98
CDH19-202ENST00000454642 ERFEQ4G0M1 354 aa8.91□□□□□ -0.98
CDH19-202ENST00000454642 PRMT3O60678 531 aa8.91□□□□□ -0.98
CDH19-202ENST00000454642 LGR5O75473 907 aa8.91□□□□□ -0.98
CDH19-202ENST00000454642 ATP1A2P50993 1020 aa8.91□□□□□ -0.98
CDH19-202ENST00000454642 C4orf48Q5BLP8 95 aa8.91□□□□□ -0.98
CDH19-202ENST00000454642 BPHLQ86WA6 291 aaPredicted RBP8.91□□□□□ -0.98
CDH19-202ENST00000454642 FCF1Q9Y324 198 aaKnown RBP8.91□□□□□ -0.98
CDH19-202ENST00000454642 S1PR4O95977 384 aa8.9□□□□□ -0.98
CDH19-202ENST00000454642 GTF2IP78347 998 aa8.9□□□□□ -0.98
CDH19-202ENST00000454642 PSME1Q06323 249 aa8.9□□□□□ -0.98
CDH19-202ENST00000454642 TJAP1Q5JTD0 557 aa8.9□□□□□ -0.98
CDH19-202ENST00000454642 ZNF511Q8NB15 262 aa8.9□□□□□ -0.98
CDH19-202ENST00000454642 NKX2-3Q8TAU0 364 aa8.9□□□□□ -0.98
CDH19-202ENST00000454642 SLC10A4Q96EP9 437 aa8.9□□□□□ -0.98
CDH19-202ENST00000454642 LARGE2Q8N3Y3 721 aa8.89□□□□□ -0.99
CDH19-202ENST00000454642 ZBTB7BO15156 539 aaPredicted RBP8.88□□□□□ -0.99
CDH19-202ENST00000454642 RAB15P59190 212 aa8.88□□□□□ -0.99
CDH19-202ENST00000454642 PRIMPOLQ96LW4 560 aa8.88□□□□□ -0.99
CDH19-202ENST00000454642 IL21Q9HBE4 155 aa8.88□□□□□ -0.99
CDH19-202ENST00000454642 RBM19Q9Y4C8 960 aaKnown RBP8.88□□□□□ -0.99
CDH19-202ENST00000454642 SFI1A8K8P3 1242 aa8.88□□□□□ -0.99
CDH19-202ENST00000454642 SWI5Q1ZZU3 235 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms