RNA–Protein interactions for RNA: ENST00000444476.1

LINC00475-208, long intergenic non-protein coding RNA 475, humanhuman

TSL 3

Gene LINC00475, Length 456 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-208ENST00000444476 KCNA6P17658 529 aa16.16■□□□□ 0.18
LINC00475-208ENST00000444476 SOWAHBA6NEL2 793 aa16.15■□□□□ 0.18
LINC00475-208ENST00000444476 SPATA31E1Q6ZUB1 1445 aa16.15■□□□□ 0.18
LINC00475-208ENST00000444476 SLC26A8Q96RN1 970 aa16.15■□□□□ 0.18
LINC00475-208ENST00000444476 NKTRP30414 1462 aaKnown RBP16.15■□□□□ 0.18
LINC00475-208ENST00000444476 ANKRD30BQ9BXX2 1392 aa16.14■□□□□ 0.17
LINC00475-208ENST00000444476 NWD1Q149M9 1564 aa16.14■□□□□ 0.17
LINC00475-208ENST00000444476 ADAMTS13Q76LX8 1427 aa16.14■□□□□ 0.17
LINC00475-208ENST00000444476 ZFRQ96KR1 1074 aaKnown RBP16.14■□□□□ 0.17
LINC00475-208ENST00000444476 PPLO60437 1756 aa16.13■□□□□ 0.17
LINC00475-208ENST00000444476 ITGBL1O95965 494 aaPredicted RBP16.13■□□□□ 0.17
LINC00475-208ENST00000444476 IRX2Q9BZI1 471 aaPredicted RBP16.13■□□□□ 0.17
LINC00475-208ENST00000444476 STRCP1A6NGW2 1772 aa16.13■□□□□ 0.17
LINC00475-208ENST00000444476 BCAMP50895 628 aa16.12■□□□□ 0.17
LINC00475-208ENST00000444476 NUTM2DQ5VT03 806 aaPredicted RBP16.12■□□□□ 0.17
LINC00475-208ENST00000444476 LRRC7Q96NW7 1537 aa16.12■□□□□ 0.17
LINC00475-208ENST00000444476 CHD2O14647 1828 aaKnown RBP16.11■□□□□ 0.17
LINC00475-208ENST00000444476 NRXN3Q9Y4C0 1643 aa16.1■□□□□ 0.17
LINC00475-208ENST00000444476 TRIM6-TRIM34B2RNG4 842 aa16.1■□□□□ 0.17
LINC00475-208ENST00000444476 BBXQ8WY36 941 aaPredicted RBP16.09■□□□□ 0.17
LINC00475-208ENST00000444476 IFT172Q9UG01 1749 aa16.08■□□□□ 0.17
LINC00475-208ENST00000444476 TOM1O60784 492 aa16.08■□□□□ 0.16
LINC00475-208ENST00000444476 FAM98CQ17RN3 349 aaKnown RBP16.08■□□□□ 0.16
LINC00475-208ENST00000444476 NCOA3Q9Y6Q9 1424 aa16.08■□□□□ 0.16
LINC00475-208ENST00000444476 RGL3Q3MIN7 710 aa16.07■□□□□ 0.16
LINC00475-208ENST00000444476 RBM33Q96EV2 1170 aaKnown RBP16.07■□□□□ 0.16
LINC00475-208ENST00000444476 MYOM2P54296 1465 aa16.06■□□□□ 0.16
LINC00475-208ENST00000444476 UBAP1LF5GYI3 381 aa16.05■□□□□ 0.16
LINC00475-208ENST00000444476 PROSER2Q86WR7 435 aaPredicted RBP16.05■□□□□ 0.16
LINC00475-208ENST00000444476 DDX12PQ92771 950 aa16.05■□□□□ 0.16
LINC00475-208ENST00000444476 SEPT9Q9UHD8 586 aaPredicted RBP16.05■□□□□ 0.16
LINC00475-208ENST00000444476 TMEM94Q12767 1356 aa16.04■□□□□ 0.16
LINC00475-208ENST00000444476 ALKQ9UM73 1620 aa16.04■□□□□ 0.16
LINC00475-208ENST00000444476 XRN1Q8IZH2 1706 aaKnown RBP16.03■□□□□ 0.16
LINC00475-208ENST00000444476 AMOTL2Q9Y2J4 779 aa16.03■□□□□ 0.16
LINC00475-208ENST00000444476 PIK3C2GO75747 1445 aa16.02■□□□□ 0.16
LINC00475-208ENST00000444476 PRAG1Q86YV5 1406 aa16.02■□□□□ 0.16
LINC00475-208ENST00000444476 PACS2Q86VP3 889 aa16.02■□□□□ 0.16
LINC00475-208ENST00000444476 LRCH3Q96II8 777 aa16.02■□□□□ 0.16
LINC00475-208ENST00000444476 WBP1LQ9NX94 342 aa16.02■□□□□ 0.16
LINC00475-208ENST00000444476 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.02■□□□□ 0.16
LINC00475-208ENST00000444476 XIRP1Q702N8 1843 aaKnown RBP16.02■□□□□ 0.16
LINC00475-208ENST00000444476 NRXN1Q9ULB1 1477 aa16.02■□□□□ 0.15
LINC00475-208ENST00000444476 SETD1AO15047 1707 aaKnown RBP16.02■□□□□ 0.15
LINC00475-208ENST00000444476 METP08581 1390 aa16.01■□□□□ 0.15
LINC00475-208ENST00000444476 LAMC1P11047 1609 aa16.01■□□□□ 0.15
LINC00475-208ENST00000444476 ADGRF5Q8IZF2 1346 aa16.01■□□□□ 0.15
LINC00475-208ENST00000444476 SPDYE16A6NNV3 312 aaPredicted RBP16.01■□□□□ 0.15
LINC00475-208ENST00000444476 KCNC4Q03721 635 aa16.01■□□□□ 0.15
LINC00475-208ENST00000444476 TSR3Q9UJK0 312 aaKnown RBP16.01■□□□□ 0.15
LINC00475-208ENST00000444476 PTPRUQ92729 1446 aa16.01■□□□□ 0.15
LINC00475-208ENST00000444476 MSH6P52701 1360 aa16■□□□□ 0.15
LINC00475-208ENST00000444476 EN1Q05925 392 aaPredicted RBP16■□□□□ 0.15
LINC00475-208ENST00000444476 NBR1Q14596 966 aa16■□□□□ 0.15
LINC00475-208ENST00000444476 MAP3K7O43318 606 aa15.99■□□□□ 0.15
LINC00475-208ENST00000444476 PDIA6Q15084 440 aa15.99■□□□□ 0.15
LINC00475-208ENST00000444476 PTCH1Q13635 1447 aa15.99■□□□□ 0.15
LINC00475-208ENST00000444476 DHX57Q6P158 1386 aaKnown RBP15.98■□□□□ 0.15
LINC00475-208ENST00000444476 DCCP43146 1447 aa15.96■□□□□ 0.15
LINC00475-208ENST00000444476 C19orf44Q9H6X5 657 aa15.96■□□□□ 0.15
LINC00475-208ENST00000444476 C14orf93Q9H972 538 aaKnown RBP15.96■□□□□ 0.15
LINC00475-208ENST00000444476 HPS5Q9UPZ3 1129 aa15.96■□□□□ 0.15
LINC00475-208ENST00000444476 C14orf37Q86TY3 774 aa15.95■□□□□ 0.14
LINC00475-208ENST00000444476 DCAF11Q8TEB1 546 aa15.95■□□□□ 0.14
LINC00475-208ENST00000444476 TECPR2O15040 1411 aa15.94■□□□□ 0.14
LINC00475-208ENST00000444476 SPRYD3Q8NCJ5 442 aa15.94■□□□□ 0.14
LINC00475-208ENST00000444476 LRPPRCP42704 1394 aaKnown RBP15.94■□□□□ 0.14
LINC00475-208ENST00000444476 DISP3Q9P2K9 1392 aa15.94■□□□□ 0.14
LINC00475-208ENST00000444476 ABCC11Q96J66 1382 aa15.93■□□□□ 0.14
LINC00475-208ENST00000444476 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.93■□□□□ 0.14
LINC00475-208ENST00000444476 KNDC1Q76NI1 1749 aa15.92■□□□□ 0.14
LINC00475-208ENST00000444476 PIP4K2BP78356 416 aa15.92■□□□□ 0.14
LINC00475-208ENST00000444476 FAM135BQ49AJ0 1406 aa15.92■□□□□ 0.14
LINC00475-208ENST00000444476 ADGRL3Q9HAR2 1447 aa15.92■□□□□ 0.14
LINC00475-208ENST00000444476 ATF3P18847 181 aa15.91■□□□□ 0.14
LINC00475-208ENST00000444476 SIRT1Q96EB6 747 aa15.91■□□□□ 0.14
LINC00475-208ENST00000444476 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.91■□□□□ 0.14
LINC00475-208ENST00000444476 ROBO2Q9HCK4 1378 aa15.9■□□□□ 0.14
LINC00475-208ENST00000444476 TSR1Q2NL82 804 aaKnown RBP15.9■□□□□ 0.14
LINC00475-208ENST00000444476 ILDR2Q71H61 639 aa15.9■□□□□ 0.14
LINC00475-208ENST00000444476 TSKSQ9UJT2 592 aa15.9■□□□□ 0.14
LINC00475-208ENST00000444476 KDM2AQ9Y2K7 1162 aa15.9■□□□□ 0.14
LINC00475-208ENST00000444476 YTHDC2Q9H6S0 1430 aaKnown RBP15.9■□□□□ 0.14
LINC00475-208ENST00000444476 ASXL1Q8IXJ9 1541 aa15.89■□□□□ 0.13
LINC00475-208ENST00000444476 CFAP70Q5T0N1 1121 aa15.89■□□□□ 0.13
LINC00475-208ENST00000444476 SLAIN2Q9P270 581 aa15.89■□□□□ 0.13
LINC00475-208ENST00000444476 KIAA1210Q9ULL0 1709 aa15.88■□□□□ 0.13
LINC00475-208ENST00000444476 PPP4CP60510 307 aa15.88■□□□□ 0.13
LINC00475-208ENST00000444476 E2F4Q16254 413 aa15.88■□□□□ 0.13
LINC00475-208ENST00000444476 DLC1Q96QB1 1528 aa15.87■□□□□ 0.13
LINC00475-208ENST00000444476 NALCNQ8IZF0 1738 aa15.86■□□□□ 0.13
LINC00475-208ENST00000444476 TMEM132EQ6IEE7 984 aa15.86■□□□□ 0.13
LINC00475-208ENST00000444476 CDCA7LQ96GN5 454 aa15.86■□□□□ 0.13
LINC00475-208ENST00000444476 WDR70Q9NW82 654 aa15.86■□□□□ 0.13
LINC00475-208ENST00000444476 ADGRB1O14514 1584 aa15.86■□□□□ 0.13
LINC00475-208ENST00000444476 PRSS12P56730 875 aa15.85■□□□□ 0.13
LINC00475-208ENST00000444476 PCGF6Q9BYE7 350 aa15.85■□□□□ 0.13
LINC00475-208ENST00000444476 STK26Q9P289 416 aa15.85■□□□□ 0.13
LINC00475-208ENST00000444476 ROBO1Q9Y6N7 1651 aa15.84■□□□□ 0.13
LINC00475-208ENST00000444476 SIN3AQ96ST3 1273 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms