RNA–Protein interactions for RNA: ENST00000444263.5

LINC00278-202, long intergenic non-protein coding RNA 278, humanhuman

TSL 3 BASIC

Gene LINC00278, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00278-202ENST00000444263 PDXDC2PQ6P474 469 aa8.86□□□□□ -0.99
LINC00278-202ENST00000444263 ZBTB33Q86T24 672 aa8.86□□□□□ -0.99
LINC00278-202ENST00000444263 LRRN4Q8WUT4 740 aa8.86□□□□□ -0.99
LINC00278-202ENST00000444263 CDV3Q9UKY7 258 aaKnown RBP8.86□□□□□ -0.99
LINC00278-202ENST00000444263 ZC3H4Q9UPT8 1303 aaKnown RBP8.85□□□□□ -0.99
LINC00278-202ENST00000444263 PNMA1Q8ND90 353 aa8.85□□□□□ -0.99
LINC00278-202ENST00000444263 GPBP1L1Q9HC44 474 aaPredicted RBP8.85□□□□□ -0.99
LINC00278-202ENST00000444263 AP1G2O75843 785 aa8.84□□□□□ -0.99
LINC00278-202ENST00000444263 PPP1R26Q5T8A7 1209 aaPredicted RBP8.84□□□□□ -0.99
LINC00278-202ENST00000444263 PTK2Q05397 1052 aa8.83□□□□□ -1
LINC00278-202ENST00000444263 DHX9Q08211 1270 aaKnown RBP8.83□□□□□ -1
LINC00278-202ENST00000444263 NR6A1Q15406 480 aa8.83□□□□□ -1
LINC00278-202ENST00000444263 PROCA1Q8NCQ7 364 aaPredicted RBP8.83□□□□□ -1
LINC00278-202ENST00000444263 SOS2Q07890 1332 aaPredicted RBP8.82□□□□□ -1
LINC00278-202ENST00000444263 BCANQ96GW7 911 aa8.82□□□□□ -1
LINC00278-202ENST00000444263 KCTD15Q96SI1 283 aaPredicted RBP8.82□□□□□ -1
LINC00278-202ENST00000444263 TTLL8A6PVC2 850 aa8.81□□□□□ -1
LINC00278-202ENST00000444263 VSIG8P0DPA2 414 aa8.81□□□□□ -1
LINC00278-202ENST00000444263 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.81□□□□□ -1
LINC00278-202ENST00000444263 PPP2R2DQ66LE6 453 aa8.81□□□□□ -1
LINC00278-202ENST00000444263 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.81□□□□□ -1
LINC00278-202ENST00000444263 FAM117AQ9C073 453 aa8.81□□□□□ -1
LINC00278-202ENST00000444263 DNMT3LQ9UJW3 386 aa8.81□□□□□ -1
LINC00278-202ENST00000444263 PPFIA3O75145 1194 aa8.8□□□□□ -1
LINC00278-202ENST00000444263 CBLBQ13191 982 aa8.79□□□□□ -1
LINC00278-202ENST00000444263 GPSM3Q9Y4H4 160 aa8.79□□□□□ -1
LINC00278-202ENST00000444263 NBPF20Q3BBV1 942 aa8.78□□□□□ -1
LINC00278-202ENST00000444263 INTS6LQ5JSJ4 861 aaKnown RBP8.77□□□□□ -1.01
LINC00278-202ENST00000444263 Q6ZVU0 165 aa8.77□□□□□ -1.01
LINC00278-202ENST00000444263 ADAM32Q8TC27 787 aa8.77□□□□□ -1.01
LINC00278-202ENST00000444263 FIGNL2A6NMB9 653 aa8.76□□□□□ -1.01
LINC00278-202ENST00000444263 USP17L8P0C7I0 530 aa8.76□□□□□ -1.01
LINC00278-202ENST00000444263 LORP23490 312 aaPredicted RBP8.76□□□□□ -1.01
LINC00278-202ENST00000444263 FBXO31Q5XUX0 539 aaPredicted RBP8.76□□□□□ -1.01
LINC00278-202ENST00000444263 SPINT1O43278 529 aa8.75□□□□□ -1.01
LINC00278-202ENST00000444263 RAB15P59190 212 aa8.75□□□□□ -1.01
LINC00278-202ENST00000444263 DZIP3Q86Y13 1208 aaKnown RBP8.75□□□□□ -1.01
LINC00278-202ENST00000444263 RELBQ01201 579 aa8.74□□□□□ -1.01
LINC00278-202ENST00000444263 PTSQ03393 145 aa8.74□□□□□ -1.01
LINC00278-202ENST00000444263 AGBL1Q96MI9 1066 aa8.73□□□□□ -1.01
LINC00278-202ENST00000444263 POLMQ9NP87 494 aaPredicted RBP8.73□□□□□ -1.01
LINC00278-202ENST00000444263 RFC5P40937 340 aa8.72□□□□□ -1.01
LINC00278-202ENST00000444263 EPS8L1Q8TE68 723 aa8.72□□□□□ -1.01
LINC00278-202ENST00000444263 TRIM52Q96A61 297 aa8.72□□□□□ -1.01
LINC00278-202ENST00000444263 PCMTD1Q96MG8 357 aaPredicted RBP8.72□□□□□ -1.01
LINC00278-202ENST00000444263 HMX1Q9NP08 348 aaPredicted RBP8.72□□□□□ -1.01
LINC00278-202ENST00000444263 OCSTAMPQ9BR26 566 aa8.71□□□□□ -1.02
LINC00278-202ENST00000444263 CCDC155Q8N6L0 562 aa8.7□□□□□ -1.02
LINC00278-202ENST00000444263 INSM2Q96T92 566 aaPredicted RBP8.7□□□□□ -1.02
LINC00278-202ENST00000444263 ADH1AP07327 375 aa8.69□□□□□ -1.02
LINC00278-202ENST00000444263 CTSOP43234 321 aaPredicted RBP8.69□□□□□ -1.02
LINC00278-202ENST00000444263 ZNF784Q8NCA9 323 aaPredicted RBP8.69□□□□□ -1.02
LINC00278-202ENST00000444263 ZNF395Q9H8N7 513 aaPredicted RBP8.69□□□□□ -1.02
LINC00278-202ENST00000444263 TMPRSS4Q9NRS4 437 aa8.69□□□□□ -1.02
LINC00278-202ENST00000444263 TMEM259Q4ZIN3 620 aa8.68□□□□□ -1.02
LINC00278-202ENST00000444263 CNTNAP3BQ96NU0 1288 aa8.68□□□□□ -1.02
LINC00278-202ENST00000444263 CNTNAP3Q9BZ76 1288 aa8.68□□□□□ -1.02
LINC00278-202ENST00000444263 CDC14CA4D256 554 aa8.67□□□□□ -1.02
LINC00278-202ENST00000444263 ERVH48-1M5A8F1 160 aa8.67□□□□□ -1.02
LINC00278-202ENST00000444263 SLC35F4A4IF30 521 aa8.66□□□□□ -1.02
LINC00278-202ENST00000444263 NEUROD2Q15784 382 aa8.66□□□□□ -1.02
LINC00278-202ENST00000444263 COL25A1Q9BXS0 654 aaPredicted RBP8.66□□□□□ -1.02
LINC00278-202ENST00000444263 GOPCQ9HD26 462 aa8.66□□□□□ -1.02
LINC00278-202ENST00000444263 ITGA6P23229 1130 aa8.65□□□□□ -1.02
LINC00278-202ENST00000444263 SV2AQ7L0J3 742 aa8.65□□□□□ -1.02
LINC00278-202ENST00000444263 SEPT12Q8IYM1 358 aa8.65□□□□□ -1.02
LINC00278-202ENST00000444263 GPR161Q8N6U8 529 aaKnown RBP8.65□□□□□ -1.02
LINC00278-202ENST00000444263 RNF217Q8TC41 542 aa8.65□□□□□ -1.02
LINC00278-202ENST00000444263 NANOS1Q8WY41 292 aaKnown RBP8.65□□□□□ -1.02
LINC00278-202ENST00000444263 PCDHB9Q9Y5E1 797 aa8.65□□□□□ -1.02
LINC00278-202ENST00000444263 ESPNB1AK53 854 aa8.64□□□□□ -1.03
LINC00278-202ENST00000444263 PTGIRP43119 386 aa8.64□□□□□ -1.03
LINC00278-202ENST00000444263 CYLDQ9NQC7 956 aa8.64□□□□□ -1.03
LINC00278-202ENST00000444263 ZBBXA8MT70 800 aa8.63□□□□□ -1.03
LINC00278-202ENST00000444263 KRT76Q01546 638 aa8.63□□□□□ -1.03
LINC00278-202ENST00000444263 VWA5B2Q8N398 1253 aa8.63□□□□□ -1.03
LINC00278-202ENST00000444263 TRIM34Q9BYJ4 488 aa8.63□□□□□ -1.03
LINC00278-202ENST00000444263 LILRA1O75019 489 aa8.62□□□□□ -1.03
LINC00278-202ENST00000444263 ADD1P35611 737 aaKnown RBP8.62□□□□□ -1.03
LINC00278-202ENST00000444263 LYSMD3Q7Z3D4 306 aa8.62□□□□□ -1.03
LINC00278-202ENST00000444263 SVOPQ8N4V2 548 aa8.62□□□□□ -1.03
LINC00278-202ENST00000444263 RNF225M0QZC1 329 aaPredicted RBP8.61□□□□□ -1.03
LINC00278-202ENST00000444263 FOXD4L5Q5VV16 416 aaPredicted RBP8.61□□□□□ -1.03
LINC00278-202ENST00000444263 IL27Q8NEV9 243 aa8.61□□□□□ -1.03
LINC00278-202ENST00000444263 ZNF592Q92610 1267 aa8.6□□□□□ -1.03
LINC00278-202ENST00000444263 ATP5J2-PTCD1G3V325 749 aa8.59□□□□□ -1.03
LINC00278-202ENST00000444263 RNF20Q5VTR2 975 aa8.59□□□□□ -1.03
LINC00278-202ENST00000444263 CCDC125Q86Z20 511 aa8.59□□□□□ -1.03
LINC00278-202ENST00000444263 ZNF330Q9Y3S2 320 aaPredicted RBP8.59□□□□□ -1.03
LINC00278-202ENST00000444263 SLC24A1O60721 1099 aa8.58□□□□□ -1.04
LINC00278-202ENST00000444263 GIGYF1O75420 1035 aaPredicted RBP8.58□□□□□ -1.04
LINC00278-202ENST00000444263 FBXO45P0C2W1 286 aa8.58□□□□□ -1.04
LINC00278-202ENST00000444263 RNFT1Q5M7Z0 435 aa8.58□□□□□ -1.04
LINC00278-202ENST00000444263 SENP3-EIF4A1A0A087X0R7 540 aa8.57□□□□□ -1.04
LINC00278-202ENST00000444263 MEN1O00255 615 aa8.57□□□□□ -1.04
LINC00278-202ENST00000444263 KCNMA1Q12791 1236 aa8.57□□□□□ -1.04
LINC00278-202ENST00000444263 PRICKLE2Q7Z3G6 844 aa8.57□□□□□ -1.04
LINC00278-202ENST00000444263 ESF1Q9H501 851 aaKnown RBP8.57□□□□□ -1.04
LINC00278-202ENST00000444263 APBB1O00213 710 aa8.56□□□□□ -1.04
LINC00278-202ENST00000444263 RHOQP17081 205 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms