RNA–Protein interactions for RNA: ENST00000443945.6

LRCH1-204, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 1 (best)

Gene LRCH1, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-204ENST00000443945 AATKQ6ZMQ8 1374 aa25.02■■□□□ 1.6
LRCH1-204ENST00000443945 COL18A1P39060 1754 aa25.02■■□□□ 1.6
LRCH1-204ENST00000443945 COL5A2P05997 1499 aaPredicted RBP25.01■■□□□ 1.59
LRCH1-204ENST00000443945 KIF20BQ96Q89 1820 aa25.01■■□□□ 1.59
LRCH1-204ENST00000443945 FAM98CQ17RN3 349 aaKnown RBP25.01■■□□□ 1.59
LRCH1-204ENST00000443945 SPATA31A5Q5VU36 1347 aa25■■□□□ 1.59
LRCH1-204ENST00000443945 WASHC2AQ641Q2 1341 aa25■■□□□ 1.59
LRCH1-204ENST00000443945 SPATA31A7Q8IWB4 1347 aa25■■□□□ 1.59
LRCH1-204ENST00000443945 RGPD5Q99666 1765 aa25■■□□□ 1.59
LRCH1-204ENST00000443945 LTN1O94822 1766 aa24.99■■□□□ 1.59
LRCH1-204ENST00000443945 A0A0G2JS52 829 aa24.99■■□□□ 1.59
LRCH1-204ENST00000443945 MYT1Q01538 1121 aa24.99■■□□□ 1.59
LRCH1-204ENST00000443945 CCDC7Q96M83 1385 aa24.98■■□□□ 1.59
LRCH1-204ENST00000443945 SPATA31A1Q5TZJ5 1347 aa24.97■■□□□ 1.59
LRCH1-204ENST00000443945 RRS1Q15050 365 aaKnown RBP24.97■■□□□ 1.59
LRCH1-204ENST00000443945 SEPT12Q8IYM1 358 aa24.96■■□□□ 1.59
LRCH1-204ENST00000443945 CGNL1Q0VF96 1302 aa24.96■■□□□ 1.59
LRCH1-204ENST00000443945 MAP3K19Q56UN5 1328 aa24.95■■□□□ 1.58
LRCH1-204ENST00000443945 CSB-PGBD3P0DP91 1061 aa24.92■■□□□ 1.58
LRCH1-204ENST00000443945 TOM1L2Q6ZVM7 507 aa24.92■■□□□ 1.58
LRCH1-204ENST00000443945 BRWD3Q6RI45 1802 aa24.91■■□□□ 1.58
LRCH1-204ENST00000443945 WDR17Q8IZU2 1322 aa24.91■■□□□ 1.58
LRCH1-204ENST00000443945 ONECUT3O60422 494 aaPredicted RBP24.91■■□□□ 1.58
LRCH1-204ENST00000443945 TNNT2P45379 298 aaPredicted RBP24.91■■□□□ 1.58
LRCH1-204ENST00000443945 CRB1P82279 1406 aa24.9■■□□□ 1.58
LRCH1-204ENST00000443945 LTV1Q96GA3 475 aaPredicted RBP24.9■■□□□ 1.58
LRCH1-204ENST00000443945 AMPHP49418 695 aa24.89■■□□□ 1.58
LRCH1-204ENST00000443945 TCP11L2Q8N4U5 519 aa24.89■■□□□ 1.57
LRCH1-204ENST00000443945 KNSTRNQ9Y448 316 aa24.88■■□□□ 1.57
LRCH1-204ENST00000443945 ERBB3P21860 1342 aa24.87■■□□□ 1.57
LRCH1-204ENST00000443945 ANKRD24Q8TF21 1146 aa24.87■■□□□ 1.57
LRCH1-204ENST00000443945 IP6K1Q92551 441 aa24.87■■□□□ 1.57
LRCH1-204ENST00000443945 HOXC9P31274 260 aa24.87■■□□□ 1.57
LRCH1-204ENST00000443945 CNGB1Q14028 1251 aaPredicted RBP24.87■■□□□ 1.57
LRCH1-204ENST00000443945 FAM182BQ5T319 152 aa24.87■■□□□ 1.57
LRCH1-204ENST00000443945 EMILIN1Q9Y6C2 1016 aa24.87■■□□□ 1.57
LRCH1-204ENST00000443945 ABCC6O95255 1503 aa24.86■■□□□ 1.57
LRCH1-204ENST00000443945 THSD7AQ9UPZ6 1657 aa24.85■■□□□ 1.57
LRCH1-204ENST00000443945 PPM1GO15355 546 aaPredicted RBP24.85■■□□□ 1.57
LRCH1-204ENST00000443945 NLRP2Q9NX02 1062 aa24.84■■□□□ 1.57
LRCH1-204ENST00000443945 PEAK1Q9H792 1746 aa24.84■■□□□ 1.57
LRCH1-204ENST00000443945 PER1O15534 1290 aaPredicted RBP24.83■■□□□ 1.57
LRCH1-204ENST00000443945 KRT27Q7Z3Y8 459 aa24.83■■□□□ 1.57
LRCH1-204ENST00000443945 ANKRD26Q9UPS8 1709 aa24.83■■□□□ 1.57
LRCH1-204ENST00000443945 AMER1Q5JTC6 1135 aaPredicted RBP24.82■■□□□ 1.56
LRCH1-204ENST00000443945 BARGINQ6ZT62 677 aa24.82■■□□□ 1.56
LRCH1-204ENST00000443945 UPF1Q92900 1129 aaKnown RBP eCLIP24.82■■□□□ 1.56
LRCH1-204ENST00000443945 BLMP54132 1417 aaPredicted RBP24.82■■□□□ 1.56
LRCH1-204ENST00000443945 HSP90AB2PQ58FF8 381 aa24.82■■□□□ 1.56
LRCH1-204ENST00000443945 CARD10Q9BWT7 1032 aa24.81■■□□□ 1.56
LRCH1-204ENST00000443945 THRAP3Q9Y2W1 955 aaKnown RBP24.8■■□□□ 1.56
LRCH1-204ENST00000443945 CC2D1BQ5T0F9 858 aaKnown RBP24.79■■□□□ 1.56
LRCH1-204ENST00000443945 MORC1Q86VD1 984 aa24.79■■□□□ 1.56
LRCH1-204ENST00000443945 RTL1A6NKG5 1358 aa24.79■■□□□ 1.56
LRCH1-204ENST00000443945 MAP2P11137 1827 aaKnown RBP24.78■■□□□ 1.56
LRCH1-204ENST00000443945 POLKQ9UBT6 870 aa24.78■■□□□ 1.56
LRCH1-204ENST00000443945 NSD2O96028 1365 aa24.78■■□□□ 1.56
LRCH1-204ENST00000443945 FLT4P35916 1363 aa24.77■■□□□ 1.56
LRCH1-204ENST00000443945 RGPD2P0DJD1 1756 aa24.76■■□□□ 1.55
LRCH1-204ENST00000443945 USHBP1Q8N6Y0 703 aa24.74■■□□□ 1.55
LRCH1-204ENST00000443945 WNK3Q9BYP7 1800 aa24.74■■□□□ 1.55
LRCH1-204ENST00000443945 PDE3BQ13370 1112 aa24.73■■□□□ 1.55
LRCH1-204ENST00000443945 INSRP06213 1382 aa24.73■■□□□ 1.55
LRCH1-204ENST00000443945 LRRC37A3O60309 1634 aa24.73■■□□□ 1.55
LRCH1-204ENST00000443945 NBPF6Q5VWK0 638 aa24.73■■□□□ 1.55
LRCH1-204ENST00000443945 NBPF4Q96M43 638 aa24.73■■□□□ 1.55
LRCH1-204ENST00000443945 PARP4Q9UKK3 1724 aaKnown RBP24.72■■□□□ 1.55
LRCH1-204ENST00000443945 DISP2A7MBM2 1401 aa24.72■■□□□ 1.55
LRCH1-204ENST00000443945 DDB1Q16531 1140 aa24.71■■□□□ 1.55
LRCH1-204ENST00000443945 KIF24Q5T7B8 1368 aa24.7■■□□□ 1.54
LRCH1-204ENST00000443945 SMG6Q86US8 1419 aaKnown RBP24.69■■□□□ 1.54
LRCH1-204ENST00000443945 FAM208AQ9UK61 1670 aaKnown RBP24.69■■□□□ 1.54
LRCH1-204ENST00000443945 IL2RBP14784 551 aa24.68■■□□□ 1.54
LRCH1-204ENST00000443945 CDCA7Q9BWT1 371 aaPredicted RBP24.66■■□□□ 1.54
LRCH1-204ENST00000443945 EXOC5O00471 708 aa24.65■■□□□ 1.54
LRCH1-204ENST00000443945 MARCH10Q8NA82 808 aaPredicted RBP24.65■■□□□ 1.54
LRCH1-204ENST00000443945 EIF4A2Q14240 407 aaKnown RBP24.64■■□□□ 1.53
LRCH1-204ENST00000443945 DDX10Q13206 875 aaKnown RBP24.63■■□□□ 1.53
LRCH1-204ENST00000443945 MEGF6O75095 1541 aa24.63■■□□□ 1.53
LRCH1-204ENST00000443945 TRIM37O94972 964 aa24.62■■□□□ 1.53
LRCH1-204ENST00000443945 NPC1L1Q9UHC9 1359 aa24.62■■□□□ 1.53
LRCH1-204ENST00000443945 TNS2Q63HR2 1409 aa24.62■■□□□ 1.53
LRCH1-204ENST00000443945 MTHFSP49914 203 aa24.62■■□□□ 1.53
LRCH1-204ENST00000443945 FAM196AQ6ZSG2 479 aa24.62■■□□□ 1.53
LRCH1-204ENST00000443945 DEFB132Q7Z7B7 95 aa24.61■■□□□ 1.53
LRCH1-204ENST00000443945 EYA1Q99502 592 aa24.61■■□□□ 1.53
LRCH1-204ENST00000443945 OVOS2A0A0G2JMS6 1433 aa24.59■■□□□ 1.53
LRCH1-204ENST00000443945 DDX54Q8TDD1 881 aaKnown RBP24.58■■□□□ 1.53
LRCH1-204ENST00000443945 SF3B2Q13435 895 aaKnown RBP24.57■■□□□ 1.52
LRCH1-204ENST00000443945 PTF1AQ7RTS3 328 aa24.57■■□□□ 1.52
LRCH1-204ENST00000443945 RAPGEF4Q8WZA2 1011 aa24.57■■□□□ 1.52
LRCH1-204ENST00000443945 CCDC125Q86Z20 511 aa24.56■■□□□ 1.52
LRCH1-204ENST00000443945 TNS1Q9HBL0 1735 aaKnown RBP24.53■■□□□ 1.52
LRCH1-204ENST00000443945 TATP17735 454 aaPredicted RBP24.53■■□□□ 1.52
LRCH1-204ENST00000443945 ZCRB1Q8TBF4 217 aaKnown RBP24.53■■□□□ 1.52
LRCH1-204ENST00000443945 ZNF316A6NFI3 1004 aaPredicted RBP24.52■■□□□ 1.52
LRCH1-204ENST00000443945 ACSBG1Q96GR2 724 aa24.52■■□□□ 1.52
LRCH1-204ENST00000443945 RGPD1P0DJD0 1748 aa24.52■■□□□ 1.52
LRCH1-204ENST00000443945 NCAPD2Q15021 1401 aa24.52■■□□□ 1.52
LRCH1-204ENST00000443945 AEBP1Q8IUX7 1158 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms