RNA–Protein interactions for RNA: ENST00000441986.5

HDAC9-215, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-215ENST00000441986 PHF12Q96QT6 1004 aa9.1□□□□□ -0.95
HDAC9-215ENST00000441986 PIK3C2GO75747 1445 aa9.1□□□□□ -0.95
HDAC9-215ENST00000441986 SOX12O15370 315 aa9.09□□□□□ -0.95
HDAC9-215ENST00000441986 EZH2Q15910 746 aaKnown RBP9.09□□□□□ -0.95
HDAC9-215ENST00000441986 EFCAB3Q8N7B9 438 aa9.09□□□□□ -0.95
HDAC9-215ENST00000441986 NGDNQ8NEJ9 315 aaKnown RBP9.09□□□□□ -0.95
HDAC9-215ENST00000441986 CABP2Q9NPB3 220 aa9.09□□□□□ -0.95
HDAC9-215ENST00000441986 NRXN1Q9ULB1 1477 aa9.08□□□□□ -0.96
HDAC9-215ENST00000441986 BRWD3Q6RI45 1802 aa9.08□□□□□ -0.96
HDAC9-215ENST00000441986 C19orf67A6NJJ6 358 aa9.08□□□□□ -0.96
HDAC9-215ENST00000441986 TRIM37O94972 964 aa9.08□□□□□ -0.96
HDAC9-215ENST00000441986 APBA3O96018 575 aa9.08□□□□□ -0.96
HDAC9-215ENST00000441986 EVA1CP58658 441 aa9.08□□□□□ -0.96
HDAC9-215ENST00000441986 NBPF8Q3BBV2 869 aa9.08□□□□□ -0.96
HDAC9-215ENST00000441986 NBPF14Q5TI25 921 aa9.08□□□□□ -0.96
HDAC9-215ENST00000441986 FBXO22Q8NEZ5 403 aa9.08□□□□□ -0.96
HDAC9-215ENST00000441986 CAMKK2Q96RR4 588 aa9.08□□□□□ -0.96
HDAC9-215ENST00000441986 PRDM11Q9NQV5 511 aa9.08□□□□□ -0.96
HDAC9-215ENST00000441986 LRP5O75197 1615 aa9.08□□□□□ -0.96
HDAC9-215ENST00000441986 FMN2Q9NZ56 1722 aa9.08□□□□□ -0.96
HDAC9-215ENST00000441986 ANKARQ7Z5J8 1434 aa9.07□□□□□ -0.96
HDAC9-215ENST00000441986 NLRP6P59044 892 aa9.07□□□□□ -0.96
HDAC9-215ENST00000441986 PDE3BQ13370 1112 aa9.07□□□□□ -0.96
HDAC9-215ENST00000441986 HIRIP3Q9BW71 556 aaPredicted RBP9.07□□□□□ -0.96
HDAC9-215ENST00000441986 TRAK1Q9UPV9 953 aa9.07□□□□□ -0.96
HDAC9-215ENST00000441986 NWD2Q9ULI1 1742 aa9.07□□□□□ -0.96
HDAC9-215ENST00000441986 EIF3AQ14152 1382 aaKnown RBP9.07□□□□□ -0.96
HDAC9-215ENST00000441986 WASLO00401 505 aaPredicted RBP9.06□□□□□ -0.96
HDAC9-215ENST00000441986 PRKCSHP14314 528 aaPredicted RBP9.06□□□□□ -0.96
HDAC9-215ENST00000441986 STAC3Q96MF2 364 aa9.06□□□□□ -0.96
HDAC9-215ENST00000441986 SPATA31A1Q5TZJ5 1347 aa9.05□□□□□ -0.96
HDAC9-215ENST00000441986 PARD3Q8TEW0 1356 aa9.05□□□□□ -0.96
HDAC9-215ENST00000441986 C11orf95C9JLR9 678 aaPredicted RBP9.05□□□□□ -0.96
HDAC9-215ENST00000441986 YY1P25490 414 aa9.05□□□□□ -0.96
HDAC9-215ENST00000441986 STRN4Q9NRL3 753 aa9.05□□□□□ -0.96
HDAC9-215ENST00000441986 KNDC1Q76NI1 1749 aa9.05□□□□□ -0.96
HDAC9-215ENST00000441986 DISP2A7MBM2 1401 aa9.05□□□□□ -0.96
HDAC9-215ENST00000441986 MINK1Q8N4C8 1332 aaPredicted RBP9.05□□□□□ -0.96
HDAC9-215ENST00000441986 ZC3H6P61129 1189 aaKnown RBP9.04□□□□□ -0.96
HDAC9-215ENST00000441986 TPRNQ4KMQ1 711 aa9.04□□□□□ -0.96
HDAC9-215ENST00000441986 BARGINQ6ZT62 677 aa9.04□□□□□ -0.96
HDAC9-215ENST00000441986 USP35Q9P2H5 1018 aa9.04□□□□□ -0.96
HDAC9-215ENST00000441986 PLCH1Q4KWH8 1693 aa9.04□□□□□ -0.96
HDAC9-215ENST00000441986 CHRNA2Q15822 529 aa9.03□□□□□ -0.96
HDAC9-215ENST00000441986 NUDT16Q96DE0 195 aaKnown RBP9.03□□□□□ -0.96
HDAC9-215ENST00000441986 SPON1Q9HCB6 807 aa9.03□□□□□ -0.96
HDAC9-215ENST00000441986 PPP1R1BQ9UD71 204 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-215ENST00000441986 RGPD8O14715 1765 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-215ENST00000441986 PRR36Q9H6K5 1346 aa9.03□□□□□ -0.96
HDAC9-215ENST00000441986 COL14A1Q05707 1796 aaKnown RBP9.02□□□□□ -0.97
HDAC9-215ENST00000441986 PPP1R37O75864 691 aa9.02□□□□□ -0.97
HDAC9-215ENST00000441986 LHX8Q68G74 356 aa9.02□□□□□ -0.97
HDAC9-215ENST00000441986 DCAF11Q8TEB1 546 aa9.02□□□□□ -0.97
HDAC9-215ENST00000441986 MS4A3Q96HJ5 214 aa9.02□□□□□ -0.97
HDAC9-215ENST00000441986 THRAP3Q9Y2W1 955 aaKnown RBP9.02□□□□□ -0.97
HDAC9-215ENST00000441986 KIAA0232Q92628 1395 aa9.01□□□□□ -0.97
HDAC9-215ENST00000441986 DLC1Q96QB1 1528 aa9.01□□□□□ -0.97
HDAC9-215ENST00000441986 KCNQ2O43526 872 aa9.01□□□□□ -0.97
HDAC9-215ENST00000441986 TCP11L2Q8N4U5 519 aa9.01□□□□□ -0.97
HDAC9-215ENST00000441986 ABTB2Q8N961 1025 aa9.01□□□□□ -0.97
HDAC9-215ENST00000441986 TMEM106CQ9BVX2 250 aa9.01□□□□□ -0.97
HDAC9-215ENST00000441986 RGPD1P0DJD0 1748 aa9□□□□□ -0.97
HDAC9-215ENST00000441986 IFT172Q9UG01 1749 aa9□□□□□ -0.97
HDAC9-215ENST00000441986 NUTM2GQ5VZR2 741 aa9□□□□□ -0.97
HDAC9-215ENST00000441986 CDK19Q9BWU1 502 aa9□□□□□ -0.97
HDAC9-215ENST00000441986 WDR70Q9NW82 654 aa9□□□□□ -0.97
HDAC9-215ENST00000441986 LARP1Q6PKG0 1096 aaKnown RBP8.99□□□□□ -0.97
HDAC9-215ENST00000441986 NLRP13Q86W25 1043 aa8.99□□□□□ -0.97
HDAC9-215ENST00000441986 TRPC6Q9Y210 931 aa8.99□□□□□ -0.97
HDAC9-215ENST00000441986 NRAPQ86VF7 1730 aa8.98□□□□□ -0.97
HDAC9-215ENST00000441986 PLEKHG3A1L390 1219 aa8.98□□□□□ -0.97
HDAC9-215ENST00000441986 PLSCR1O15162 318 aa8.98□□□□□ -0.97
HDAC9-215ENST00000441986 GABBR2O75899 941 aa8.98□□□□□ -0.97
HDAC9-215ENST00000441986 GOLGA2Q08379 1002 aa8.98□□□□□ -0.97
HDAC9-215ENST00000441986 ACEP12821 1306 aa8.98□□□□□ -0.97
HDAC9-215ENST00000441986 ABCA3Q99758 1704 aa8.97□□□□□ -0.97
HDAC9-215ENST00000441986 TULP4Q9NRJ4 1543 aa8.97□□□□□ -0.97
HDAC9-215ENST00000441986 GCP02774 474 aa8.97□□□□□ -0.97
HDAC9-215ENST00000441986 TIE1P35590 1138 aa8.97□□□□□ -0.97
HDAC9-215ENST00000441986 MS4A4AQ96JQ5 239 aa8.97□□□□□ -0.97
HDAC9-215ENST00000441986 ADGRB2O60241 1585 aa8.97□□□□□ -0.97
HDAC9-215ENST00000441986 ALS2Q96Q42 1657 aa8.97□□□□□ -0.97
HDAC9-215ENST00000441986 THSD7AQ9UPZ6 1657 aa8.97□□□□□ -0.97
HDAC9-215ENST00000441986 TRPM3Q9HCF6 1732 aaPredicted RBP8.97□□□□□ -0.97
HDAC9-215ENST00000441986 KCNV2Q8TDN2 545 aa8.96□□□□□ -0.98
HDAC9-215ENST00000441986 NINLQ9Y2I6 1382 aa8.96□□□□□ -0.98
HDAC9-215ENST00000441986 DDB1Q16531 1140 aa8.95□□□□□ -0.98
HDAC9-215ENST00000441986 POLR3AO14802 1390 aaPredicted RBP8.95□□□□□ -0.98
HDAC9-215ENST00000441986 CPDO75976 1380 aa8.95□□□□□ -0.98
HDAC9-215ENST00000441986 SSH2Q76I76 1423 aa8.95□□□□□ -0.98
HDAC9-215ENST00000441986 ATP7BP35670 1465 aa8.95□□□□□ -0.98
HDAC9-215ENST00000441986 ADGRB1O14514 1584 aa8.95□□□□□ -0.98
HDAC9-215ENST00000441986 MKRN3Q13064 507 aaKnown RBP8.94□□□□□ -0.98
HDAC9-215ENST00000441986 CDCA7Q9BWT1 371 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-215ENST00000441986 TTLL13PA6NNM8 815 aa8.93□□□□□ -0.98
HDAC9-215ENST00000441986 SRPK2P78362 688 aaKnown RBP8.93□□□□□ -0.98
HDAC9-215ENST00000441986 TOM1L2Q6ZVM7 507 aa8.93□□□□□ -0.98
HDAC9-215ENST00000441986 TNS1Q9HBL0 1735 aaKnown RBP8.93□□□□□ -0.98
HDAC9-215ENST00000441986 CAMTA1Q9Y6Y1 1673 aa8.92□□□□□ -0.98
HDAC9-215ENST00000441986 BRD4O60885 1362 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms