RNA–Protein interactions for RNA: ENST00000440346.1

PTPA-221, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-221ENST00000440346 SLIT3O75094 1523 aa10.02□□□□□ -0.8
PTPA-221ENST00000440346 PARD3Q8TEW0 1356 aa10.02□□□□□ -0.8
PTPA-221ENST00000440346 USP47Q96K76 1375 aa10.02□□□□□ -0.8
PTPA-221ENST00000440346 RGPD3A6NKT7 1758 aaPredicted RBP10.02□□□□□ -0.81
PTPA-221ENST00000440346 AKAP12Q02952 1782 aa10.02□□□□□ -0.81
PTPA-221ENST00000440346 RGPD4Q7Z3J3 1758 aa10.02□□□□□ -0.81
PTPA-221ENST00000440346 LARP1Q6PKG0 1096 aaKnown RBP10.02□□□□□ -0.81
PTPA-221ENST00000440346 ABTB2Q8N961 1025 aa10.02□□□□□ -0.81
PTPA-221ENST00000440346 USP35Q9P2H5 1018 aa10.02□□□□□ -0.81
PTPA-221ENST00000440346 LRRC37A3O60309 1634 aa10.02□□□□□ -0.81
PTPA-221ENST00000440346 BRD4O60885 1362 aaPredicted RBP10.01□□□□□ -0.81
PTPA-221ENST00000440346 TCP11L2Q8N4U5 519 aa10.01□□□□□ -0.81
PTPA-221ENST00000440346 USP6P35125 1406 aa10□□□□□ -0.81
PTPA-221ENST00000440346 APBA3O96018 575 aa10□□□□□ -0.81
PTPA-221ENST00000440346 GCP02774 474 aa10□□□□□ -0.81
PTPA-221ENST00000440346 EVA1CP58658 441 aa10□□□□□ -0.81
PTPA-221ENST00000440346 SRPK2P78362 688 aaKnown RBP10□□□□□ -0.81
PTPA-221ENST00000440346 NLRP13Q86W25 1043 aa10□□□□□ -0.81
PTPA-221ENST00000440346 CABP2Q9NPB3 220 aa10□□□□□ -0.81
PTPA-221ENST00000440346 MYOM1P52179 1685 aa9.99□□□□□ -0.81
PTPA-221ENST00000440346 EIF4G2P78344 907 aaKnown RBP eCLIP9.99□□□□□ -0.81
PTPA-221ENST00000440346 PDE3BQ13370 1112 aa9.99□□□□□ -0.81
PTPA-221ENST00000440346 THRAP3Q9Y2W1 955 aaKnown RBP9.99□□□□□ -0.81
PTPA-221ENST00000440346 CRB1P82279 1406 aa9.99□□□□□ -0.81
PTPA-221ENST00000440346 MON2Q7Z3U7 1717 aa9.98□□□□□ -0.81
PTPA-221ENST00000440346 AATKQ6ZMQ8 1374 aa9.98□□□□□ -0.81
PTPA-221ENST00000440346 CASZ1Q86V15 1759 aa9.97□□□□□ -0.81
PTPA-221ENST00000440346 ST20-MTHFSA0A0A6YYL1 179 aa9.97□□□□□ -0.81
PTPA-221ENST00000440346 CABP1Q9NZU7 370 aa9.97□□□□□ -0.81
PTPA-221ENST00000440346 ABCB7O75027 752 aa9.96□□□□□ -0.82
PTPA-221ENST00000440346 PUS7Q96PZ0 661 aaKnown RBP9.96□□□□□ -0.82
PTPA-221ENST00000440346 TESK2Q96S53 571 aa9.96□□□□□ -0.82
PTPA-221ENST00000440346 ZNF219Q9P2Y4 722 aaPredicted RBP9.96□□□□□ -0.82
PTPA-221ENST00000440346 EVC2Q86UK5 1308 aa9.96□□□□□ -0.82
PTPA-221ENST00000440346 OVOS2A0A0G2JMS6 1433 aa9.96□□□□□ -0.82
PTPA-221ENST00000440346 OVOS2A0A0J9YW53 1432 aa9.96□□□□□ -0.82
PTPA-221ENST00000440346 OVOS2Q6IE36 1432 aa9.96□□□□□ -0.82
PTPA-221ENST00000440346 USP54Q70EL1 1684 aa9.96□□□□□ -0.82
PTPA-221ENST00000440346 HSPA5P11021 654 aaKnown RBP9.95□□□□□ -0.82
PTPA-221ENST00000440346 NLRP6P59044 892 aa9.95□□□□□ -0.82
PTPA-221ENST00000440346 CPSF1Q10570 1443 aaKnown RBP9.95□□□□□ -0.82
PTPA-221ENST00000440346 NFAT5O94916 1531 aa9.95□□□□□ -0.82
PTPA-221ENST00000440346 LTN1O94822 1766 aa9.94□□□□□ -0.82
PTPA-221ENST00000440346 C11orf95C9JLR9 678 aaPredicted RBP9.94□□□□□ -0.82
PTPA-221ENST00000440346 AXIN2Q9Y2T1 843 aa9.94□□□□□ -0.82
PTPA-221ENST00000440346 BCL9O00512 1426 aa9.93□□□□□ -0.82
PTPA-221ENST00000440346 WDR17Q8IZU2 1322 aa9.93□□□□□ -0.82
PTPA-221ENST00000440346 ZBTB7CA1YPR0 619 aa9.93□□□□□ -0.82
PTPA-221ENST00000440346 TMF1P82094 1093 aa9.93□□□□□ -0.82
PTPA-221ENST00000440346 CDCA8Q53HL2 280 aa9.93□□□□□ -0.82
PTPA-221ENST00000440346 NBPF14Q5TI25 921 aa9.93□□□□□ -0.82
PTPA-221ENST00000440346 POTEHQ6S545 545 aa9.93□□□□□ -0.82
PTPA-221ENST00000440346 PTF1AQ7RTS3 328 aa9.93□□□□□ -0.82
PTPA-221ENST00000440346 KAT6BQ8WYB5 2073 aa9.93□□□□□ -0.82
PTPA-221ENST00000440346 ABCC6O95255 1503 aa9.92□□□□□ -0.82
PTPA-221ENST00000440346 NINLQ9Y2I6 1382 aa9.92□□□□□ -0.82
PTPA-221ENST00000440346 TTC21BQ7Z4L5 1316 aa9.92□□□□□ -0.82
PTPA-221ENST00000440346 KIF20BQ96Q89 1820 aa9.92□□□□□ -0.82
PTPA-221ENST00000440346 PLSCR1O15162 318 aa9.92□□□□□ -0.82
PTPA-221ENST00000440346 DDB1Q16531 1140 aa9.92□□□□□ -0.82
PTPA-221ENST00000440346 TOM1L2Q6ZVM7 507 aa9.92□□□□□ -0.82
PTPA-221ENST00000440346 ARHGEF25Q86VW2 580 aa9.92□□□□□ -0.82
PTPA-221ENST00000440346 ANKRD26Q9UPS8 1709 aa9.91□□□□□ -0.82
PTPA-221ENST00000440346 NHSQ6T4R5 1651 aa9.91□□□□□ -0.82
PTPA-221ENST00000440346 MARCH10Q8NA82 808 aaPredicted RBP9.91□□□□□ -0.82
PTPA-221ENST00000440346 BCL11BQ9C0K0 894 aaPredicted RBP9.91□□□□□ -0.82
PTPA-221ENST00000440346 ANO8Q9HCE9 1232 aaPredicted RBP9.91□□□□□ -0.82
PTPA-221ENST00000440346 TTC21AQ8NDW8 1320 aa9.9□□□□□ -0.82
PTPA-221ENST00000440346 KCNQ2O43526 872 aa9.9□□□□□ -0.82
PTPA-221ENST00000440346 PROM2Q8N271 834 aa9.9□□□□□ -0.82
PTPA-221ENST00000440346 ZNF692Q9BU19 519 aaPredicted RBP9.9□□□□□ -0.82
PTPA-221ENST00000440346 CDCA7Q9BWT1 371 aaPredicted RBP9.9□□□□□ -0.82
PTPA-221ENST00000440346 CARD10Q9BWT7 1032 aa9.9□□□□□ -0.82
PTPA-221ENST00000440346 SPON1Q9HCB6 807 aa9.9□□□□□ -0.82
PTPA-221ENST00000440346 BTAF1O14981 1849 aa9.89□□□□□ -0.83
PTPA-221ENST00000440346 SAMD1Q6SPF0 538 aaPredicted RBP9.89□□□□□ -0.83
PTPA-221ENST00000440346 KCNH5Q8NCM2 988 aa9.89□□□□□ -0.83
PTPA-221ENST00000440346 CD163L1Q9NR16 1453 aa9.89□□□□□ -0.83
PTPA-221ENST00000440346 KTN1Q86UP2 1357 aaKnown RBP9.88□□□□□ -0.83
PTPA-221ENST00000440346 PDGFDQ9GZP0 370 aaPredicted RBP9.88□□□□□ -0.83
PTPA-221ENST00000440346 TNS2Q63HR2 1409 aa9.88□□□□□ -0.83
PTPA-221ENST00000440346 USP31Q70CQ4 1352 aa9.88□□□□□ -0.83
PTPA-221ENST00000440346 CCDC7Q96M83 1385 aa9.88□□□□□ -0.83
PTPA-221ENST00000440346 PAPPAQ13219 1627 aa9.87□□□□□ -0.83
PTPA-221ENST00000440346 SOX12O15370 315 aa9.87□□□□□ -0.83
PTPA-221ENST00000440346 CHD4Q14839 1912 aa9.87□□□□□ -0.83
PTPA-221ENST00000440346 CSB-PGBD3P0DP91 1061 aa9.86□□□□□ -0.83
PTPA-221ENST00000440346 PPP1R1BQ9UD71 204 aaPredicted RBP9.86□□□□□ -0.83
PTPA-221ENST00000440346 FAM208AQ9UK61 1670 aaKnown RBP9.86□□□□□ -0.83
PTPA-221ENST00000440346 EXOC5O00471 708 aa9.85□□□□□ -0.83
PTPA-221ENST00000440346 YY1P25490 414 aa9.85□□□□□ -0.83
PTPA-221ENST00000440346 PTGER2P43116 358 aa9.85□□□□□ -0.83
PTPA-221ENST00000440346 TXNRD1Q16881 649 aa9.85□□□□□ -0.83
PTPA-221ENST00000440346 RGPD2P0DJD1 1756 aa9.85□□□□□ -0.83
PTPA-221ENST00000440346 ANKRD36BQ8N2N9 1353 aa9.85□□□□□ -0.83
PTPA-221ENST00000440346 UTRNP46939 3433 aa9.85□□□□□ -0.83
PTPA-221ENST00000440346 QSER1Q2KHR3 1735 aa9.85□□□□□ -0.83
PTPA-221ENST00000440346 ERBB3P21860 1342 aa9.84□□□□□ -0.83
PTPA-221ENST00000440346 KIF7Q2M1P5 1343 aa9.84□□□□□ -0.83
PTPA-221ENST00000440346 NME9Q86XW9 330 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms