RNA–Protein interactions for RNA: ENST00000429877.5

KDM5C-207, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-207ENST00000429877 COL18A1P39060 1754 aa23.86■■□□□ 1.41
KDM5C-207ENST00000429877 CGNL1Q0VF96 1302 aa23.85■■□□□ 1.41
KDM5C-207ENST00000429877 LARP1Q6PKG0 1096 aaKnown RBP23.85■■□□□ 1.41
KDM5C-207ENST00000429877 PANK3Q9H999 370 aa23.85■■□□□ 1.41
KDM5C-207ENST00000429877 AXIN2Q9Y2T1 843 aa23.85■■□□□ 1.41
KDM5C-207ENST00000429877 SEPT12Q8IYM1 358 aa23.83■■□□□ 1.41
KDM5C-207ENST00000429877 FAM98CQ17RN3 349 aaKnown RBP23.82■■□□□ 1.4
KDM5C-207ENST00000429877 CRB1P82279 1406 aa23.81■■□□□ 1.4
KDM5C-207ENST00000429877 WDR17Q8IZU2 1322 aa23.81■■□□□ 1.4
KDM5C-207ENST00000429877 BARGINQ6ZT62 677 aa23.8■■□□□ 1.4
KDM5C-207ENST00000429877 CCDC7Q96M83 1385 aa23.79■■□□□ 1.4
KDM5C-207ENST00000429877 TCP11L2Q8N4U5 519 aa23.79■■□□□ 1.4
KDM5C-207ENST00000429877 THRAP3Q9Y2W1 955 aaKnown RBP23.79■■□□□ 1.4
KDM5C-207ENST00000429877 KIF20BQ96Q89 1820 aa23.79■■□□□ 1.4
KDM5C-207ENST00000429877 IP6K1Q92551 441 aa23.78■■□□□ 1.4
KDM5C-207ENST00000429877 MAP3K19Q56UN5 1328 aa23.78■■□□□ 1.4
KDM5C-207ENST00000429877 BLMP54132 1417 aaPredicted RBP23.77■■□□□ 1.4
KDM5C-207ENST00000429877 USP35Q9P2H5 1018 aa23.77■■□□□ 1.4
KDM5C-207ENST00000429877 WASHC2AQ641Q2 1341 aa23.77■■□□□ 1.4
KDM5C-207ENST00000429877 TOM1L2Q6ZVM7 507 aa23.76■■□□□ 1.39
KDM5C-207ENST00000429877 ERBB3P21860 1342 aa23.76■■□□□ 1.39
KDM5C-207ENST00000429877 THSD7AQ9UPZ6 1657 aa23.76■■□□□ 1.39
KDM5C-207ENST00000429877 A0A0G2JS52 829 aa23.75■■□□□ 1.39
KDM5C-207ENST00000429877 MYT1Q01538 1121 aa23.75■■□□□ 1.39
KDM5C-207ENST00000429877 RTL1A6NKG5 1358 aa23.75■■□□□ 1.39
KDM5C-207ENST00000429877 NSD2O96028 1365 aa23.75■■□□□ 1.39
KDM5C-207ENST00000429877 LTN1O94822 1766 aa23.75■■□□□ 1.39
KDM5C-207ENST00000429877 CSB-PGBD3P0DP91 1061 aa23.74■■□□□ 1.39
KDM5C-207ENST00000429877 FBLN1P23142 703 aa23.74■■□□□ 1.39
KDM5C-207ENST00000429877 CARD10Q9BWT7 1032 aa23.74■■□□□ 1.39
KDM5C-207ENST00000429877 AMPHP49418 695 aa23.73■■□□□ 1.39
KDM5C-207ENST00000429877 KRT27Q7Z3Y8 459 aa23.73■■□□□ 1.39
KDM5C-207ENST00000429877 UPF1Q92900 1129 aaKnown RBP eCLIP23.73■■□□□ 1.39
KDM5C-207ENST00000429877 KNSTRNQ9Y448 316 aa23.73■■□□□ 1.39
KDM5C-207ENST00000429877 EP400Q96L91 3159 aa23.73■■□□□ 1.39
KDM5C-207ENST00000429877 KIF24Q5T7B8 1368 aa23.73■■□□□ 1.39
KDM5C-207ENST00000429877 HOXC9P31274 260 aa23.72■■□□□ 1.39
KDM5C-207ENST00000429877 RRS1Q15050 365 aaKnown RBP23.72■■□□□ 1.39
KDM5C-207ENST00000429877 ANKRD24Q8TF21 1146 aa23.71■■□□□ 1.39
KDM5C-207ENST00000429877 ZEB1P37275 1124 aaPredicted RBP23.7■■□□□ 1.38
KDM5C-207ENST00000429877 RGPD5Q99666 1765 aa23.7■■□□□ 1.38
KDM5C-207ENST00000429877 PER1O15534 1290 aaPredicted RBP23.68■■□□□ 1.38
KDM5C-207ENST00000429877 AMER1Q5JTC6 1135 aaPredicted RBP23.68■■□□□ 1.38
KDM5C-207ENST00000429877 CDCA7Q9BWT1 371 aaPredicted RBP23.68■■□□□ 1.38
KDM5C-207ENST00000429877 BRWD3Q6RI45 1802 aa23.68■■□□□ 1.38
KDM5C-207ENST00000429877 FLT4P35916 1363 aa23.67■■□□□ 1.38
KDM5C-207ENST00000429877 NLRP2Q9NX02 1062 aa23.67■■□□□ 1.38
KDM5C-207ENST00000429877 INSRP06213 1382 aa23.65■■□□□ 1.38
KDM5C-207ENST00000429877 ANKRD26Q9UPS8 1709 aa23.64■■□□□ 1.38
KDM5C-207ENST00000429877 EMILIN1Q9Y6C2 1016 aa23.64■■□□□ 1.37
KDM5C-207ENST00000429877 DISP2A7MBM2 1401 aa23.64■■□□□ 1.37
KDM5C-207ENST00000429877 MORC1Q86VD1 984 aa23.63■■□□□ 1.37
KDM5C-207ENST00000429877 CCDC125Q86Z20 511 aa23.63■■□□□ 1.37
KDM5C-207ENST00000429877 LTV1Q96GA3 475 aaPredicted RBP23.63■■□□□ 1.37
KDM5C-207ENST00000429877 POLKQ9UBT6 870 aa23.63■■□□□ 1.37
KDM5C-207ENST00000429877 PDE3BQ13370 1112 aa23.62■■□□□ 1.37
KDM5C-207ENST00000429877 HSP90AB2PQ58FF8 381 aa23.62■■□□□ 1.37
KDM5C-207ENST00000429877 PARP4Q9UKK3 1724 aaKnown RBP23.62■■□□□ 1.37
KDM5C-207ENST00000429877 SMG6Q86US8 1419 aaKnown RBP23.61■■□□□ 1.37
KDM5C-207ENST00000429877 NPC1L1Q9UHC9 1359 aa23.61■■□□□ 1.37
KDM5C-207ENST00000429877 PEAK1Q9H792 1746 aa23.61■■□□□ 1.37
KDM5C-207ENST00000429877 FAM208AQ9UK61 1670 aaKnown RBP23.6■■□□□ 1.37
KDM5C-207ENST00000429877 TNNT2P45379 298 aaPredicted RBP23.6■■□□□ 1.37
KDM5C-207ENST00000429877 DDB1Q16531 1140 aa23.6■■□□□ 1.37
KDM5C-207ENST00000429877 PPM1GO15355 546 aaPredicted RBP23.58■■□□□ 1.37
KDM5C-207ENST00000429877 IL2RBP14784 551 aa23.58■■□□□ 1.37
KDM5C-207ENST00000429877 FAM196AQ6ZSG2 479 aa23.57■■□□□ 1.36
KDM5C-207ENST00000429877 LRRC37A3O60309 1634 aa23.57■■□□□ 1.36
KDM5C-207ENST00000429877 WNK3Q9BYP7 1800 aa23.56■■□□□ 1.36
KDM5C-207ENST00000429877 FAM182BQ5T319 152 aa23.56■■□□□ 1.36
KDM5C-207ENST00000429877 NBPF6Q5VWK0 638 aa23.55■■□□□ 1.36
KDM5C-207ENST00000429877 NBPF4Q96M43 638 aa23.55■■□□□ 1.36
KDM5C-207ENST00000429877 TNS2Q63HR2 1409 aa23.55■■□□□ 1.36
KDM5C-207ENST00000429877 EXOC5O00471 708 aa23.54■■□□□ 1.36
KDM5C-207ENST00000429877 MAP2P11137 1827 aaKnown RBP23.52■■□□□ 1.36
KDM5C-207ENST00000429877 OVOS2A0A0G2JMS6 1433 aa23.52■■□□□ 1.36
KDM5C-207ENST00000429877 CC2D1BQ5T0F9 858 aaKnown RBP23.52■■□□□ 1.36
KDM5C-207ENST00000429877 BCL9O00512 1426 aa23.5■■□□□ 1.35
KDM5C-207ENST00000429877 SF3B2Q13435 895 aaKnown RBP23.5■■□□□ 1.35
KDM5C-207ENST00000429877 MARCH10Q8NA82 808 aaPredicted RBP23.5■■□□□ 1.35
KDM5C-207ENST00000429877 NCAPD2Q15021 1401 aa23.49■■□□□ 1.35
KDM5C-207ENST00000429877 EIF4A2Q14240 407 aaKnown RBP23.48■■□□□ 1.35
KDM5C-207ENST00000429877 USHBP1Q8N6Y0 703 aa23.47■■□□□ 1.35
KDM5C-207ENST00000429877 MEGF6O75095 1541 aa23.46■■□□□ 1.35
KDM5C-207ENST00000429877 RAPGEF4Q8WZA2 1011 aa23.46■■□□□ 1.35
KDM5C-207ENST00000429877 RGPD2P0DJD1 1756 aa23.45■■□□□ 1.34
KDM5C-207ENST00000429877 TRIM37O94972 964 aa23.45■■□□□ 1.34
KDM5C-207ENST00000429877 EYA1Q99502 592 aa23.45■■□□□ 1.34
KDM5C-207ENST00000429877 RGPD1P0DJD0 1748 aa23.43■■□□□ 1.34
KDM5C-207ENST00000429877 BAG6P46379 1132 aa23.43■■□□□ 1.34
KDM5C-207ENST00000429877 MTHFSP49914 203 aa23.43■■□□□ 1.34
KDM5C-207ENST00000429877 TATP17735 454 aaPredicted RBP23.42■■□□□ 1.34
KDM5C-207ENST00000429877 ZCRB1Q8TBF4 217 aaKnown RBP23.42■■□□□ 1.34
KDM5C-207ENST00000429877 IGSF1Q8N6C5 1336 aa23.41■■□□□ 1.34
KDM5C-207ENST00000429877 DEFB132Q7Z7B7 95 aa23.41■■□□□ 1.34
KDM5C-207ENST00000429877 PLEKHG2Q9H7P9 1386 aa23.4■■□□□ 1.34
KDM5C-207ENST00000429877 CNGB1Q14028 1251 aaPredicted RBP23.39■■□□□ 1.33
KDM5C-207ENST00000429877 BCL11BQ9C0K0 894 aaPredicted RBP23.39■■□□□ 1.33
KDM5C-207ENST00000429877 TNS1Q9HBL0 1735 aaKnown RBP23.39■■□□□ 1.33
KDM5C-207ENST00000429877 IL13P35225 146 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms