RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 KIF20BQ96Q89 1820 aa32.12■■■□□ 2.73
GLI3-202ENST00000428534 ABCC6O95255 1503 aa32.1■■■□□ 2.73
GLI3-202ENST00000428534 CCDC9Q9Y3X0 531 aaKnown RBP32.09■■■□□ 2.73
GLI3-202ENST00000428534 LMO7Q8WWI1 1683 aa32.05■■■□□ 2.72
GLI3-202ENST00000428534 STRN4Q9NRL3 753 aa32.05■■■□□ 2.72
GLI3-202ENST00000428534 NRAPQ86VF7 1730 aa32.04■■■□□ 2.72
GLI3-202ENST00000428534 CAMTA1Q9Y6Y1 1673 aa32.04■■■□□ 2.72
GLI3-202ENST00000428534 PER1O15534 1290 aaPredicted RBP32.03■■■□□ 2.72
GLI3-202ENST00000428534 AMPHP49418 695 aa32.01■■■□□ 2.71
GLI3-202ENST00000428534 IP6K1Q92551 441 aa32.01■■■□□ 2.71
GLI3-202ENST00000428534 KIF24Q5T7B8 1368 aa32.01■■■□□ 2.71
GLI3-202ENST00000428534 COL5A2P05997 1499 aaPredicted RBP32■■■□□ 2.71
GLI3-202ENST00000428534 BLMP54132 1417 aaPredicted RBP32■■■□□ 2.71
GLI3-202ENST00000428534 SPATA31A5Q5VU36 1347 aa32■■■□□ 2.71
GLI3-202ENST00000428534 SPATA31A7Q8IWB4 1347 aa32■■■□□ 2.71
GLI3-202ENST00000428534 RTL1A6NKG5 1358 aa31.99■■■□□ 2.71
GLI3-202ENST00000428534 AMER1Q5JTC6 1135 aaPredicted RBP31.99■■■□□ 2.71
GLI3-202ENST00000428534 MORC1Q86VD1 984 aa31.99■■■□□ 2.71
GLI3-202ENST00000428534 CCDC125Q86Z20 511 aa31.99■■■□□ 2.71
GLI3-202ENST00000428534 AXIN2Q9Y2T1 843 aa31.99■■■□□ 2.71
GLI3-202ENST00000428534 MAP3K19Q56UN5 1328 aa31.99■■■□□ 2.71
GLI3-202ENST00000428534 COL18A1P39060 1754 aa31.98■■■□□ 2.71
GLI3-202ENST00000428534 NPC1L1Q9UHC9 1359 aa31.97■■■□□ 2.71
GLI3-202ENST00000428534 THRAP3Q9Y2W1 955 aaKnown RBP31.97■■■□□ 2.71
GLI3-202ENST00000428534 WDR17Q8IZU2 1322 aa31.97■■■□□ 2.71
GLI3-202ENST00000428534 CSB-PGBD3P0DP91 1061 aa31.96■■■□□ 2.71
GLI3-202ENST00000428534 SEPT12Q8IYM1 358 aa31.96■■■□□ 2.71
GLI3-202ENST00000428534 ANKRD26Q9UPS8 1709 aa31.96■■■□□ 2.71
GLI3-202ENST00000428534 LTN1O94822 1766 aa31.96■■■□□ 2.71
GLI3-202ENST00000428534 SPATA31A1Q5TZJ5 1347 aa31.96■■■□□ 2.71
GLI3-202ENST00000428534 LARP1Q6PKG0 1096 aaKnown RBP31.95■■■□□ 2.71
GLI3-202ENST00000428534 CRB1P82279 1406 aa31.94■■■□□ 2.7
GLI3-202ENST00000428534 ONECUT3O60422 494 aaPredicted RBP31.94■■■□□ 2.7
GLI3-202ENST00000428534 RRS1Q15050 365 aaKnown RBP31.94■■■□□ 2.7
GLI3-202ENST00000428534 TOM1L2Q6ZVM7 507 aa31.94■■■□□ 2.7
GLI3-202ENST00000428534 HOXC9P31274 260 aa31.93■■■□□ 2.7
GLI3-202ENST00000428534 FBLN1P23142 703 aa31.91■■■□□ 2.7
GLI3-202ENST00000428534 TCP11L2Q8N4U5 519 aa31.91■■■□□ 2.7
GLI3-202ENST00000428534 ERBB3P21860 1342 aa31.91■■■□□ 2.7
GLI3-202ENST00000428534 FLT4P35916 1363 aa31.91■■■□□ 2.7
GLI3-202ENST00000428534 BARGINQ6ZT62 677 aa31.9■■■□□ 2.7
GLI3-202ENST00000428534 ANKRD24Q8TF21 1146 aa31.9■■■□□ 2.7
GLI3-202ENST00000428534 CARD10Q9BWT7 1032 aa31.89■■■□□ 2.7
GLI3-202ENST00000428534 SMG6Q86US8 1419 aaKnown RBP31.87■■■□□ 2.69
GLI3-202ENST00000428534 FAM98CQ17RN3 349 aaKnown RBP31.87■■■□□ 2.69
GLI3-202ENST00000428534 USP35Q9P2H5 1018 aa31.87■■■□□ 2.69
GLI3-202ENST00000428534 INSRP06213 1382 aa31.86■■■□□ 2.69
GLI3-202ENST00000428534 TNNT2P45379 298 aaPredicted RBP31.86■■■□□ 2.69
GLI3-202ENST00000428534 CC2D1BQ5T0F9 858 aaKnown RBP31.86■■■□□ 2.69
GLI3-202ENST00000428534 DEFB132Q7Z7B7 95 aa31.86■■■□□ 2.69
GLI3-202ENST00000428534 POLKQ9UBT6 870 aa31.86■■■□□ 2.69
GLI3-202ENST00000428534 CDCA7Q9BWT1 371 aaPredicted RBP31.85■■■□□ 2.69
GLI3-202ENST00000428534 A0A0G2JS52 829 aa31.84■■■□□ 2.69
GLI3-202ENST00000428534 PPM1GO15355 546 aaPredicted RBP31.84■■■□□ 2.69
GLI3-202ENST00000428534 MYT1Q01538 1121 aa31.84■■■□□ 2.69
GLI3-202ENST00000428534 KRT27Q7Z3Y8 459 aa31.84■■■□□ 2.69
GLI3-202ENST00000428534 EMILIN1Q9Y6C2 1016 aa31.84■■■□□ 2.69
GLI3-202ENST00000428534 NLRP2Q9NX02 1062 aa31.83■■■□□ 2.69
GLI3-202ENST00000428534 RGPD5Q99666 1765 aa31.83■■■□□ 2.69
GLI3-202ENST00000428534 ZNF316A6NFI3 1004 aaPredicted RBP31.82■■■□□ 2.68
GLI3-202ENST00000428534 DDX10Q13206 875 aaKnown RBP31.8■■■□□ 2.68
GLI3-202ENST00000428534 LTV1Q96GA3 475 aaPredicted RBP31.8■■■□□ 2.68
GLI3-202ENST00000428534 HSP90AB2PQ58FF8 381 aa31.79■■■□□ 2.68
GLI3-202ENST00000428534 FAM208AQ9UK61 1670 aaKnown RBP31.79■■■□□ 2.68
GLI3-202ENST00000428534 MAP2P11137 1827 aaKnown RBP31.78■■■□□ 2.68
GLI3-202ENST00000428534 SF3B2Q13435 895 aaKnown RBP31.76■■■□□ 2.67
GLI3-202ENST00000428534 THSD7AQ9UPZ6 1657 aa31.75■■■□□ 2.67
GLI3-202ENST00000428534 PEAK1Q9H792 1746 aa31.73■■■□□ 2.67
GLI3-202ENST00000428534 PDE3BQ13370 1112 aa31.71■■■□□ 2.67
GLI3-202ENST00000428534 IL2RBP14784 551 aa31.7■■■□□ 2.67
GLI3-202ENST00000428534 CNGB1Q14028 1251 aaPredicted RBP31.7■■■□□ 2.67
GLI3-202ENST00000428534 RGPD1P0DJD0 1748 aa31.69■■■□□ 2.66
GLI3-202ENST00000428534 DDB1Q16531 1140 aa31.69■■■□□ 2.66
GLI3-202ENST00000428534 MTHFSP49914 203 aa31.68■■■□□ 2.66
GLI3-202ENST00000428534 FAM182BQ5T319 152 aa31.67■■■□□ 2.66
GLI3-202ENST00000428534 NBPF6Q5VWK0 638 aa31.67■■■□□ 2.66
GLI3-202ENST00000428534 NBPF4Q96M43 638 aa31.67■■■□□ 2.66
GLI3-202ENST00000428534 EXOC5O00471 708 aa31.66■■■□□ 2.66
GLI3-202ENST00000428534 TNS1Q9HBL0 1735 aaKnown RBP31.65■■■□□ 2.66
GLI3-202ENST00000428534 DISP2A7MBM2 1401 aa31.65■■■□□ 2.66
GLI3-202ENST00000428534 PARP4Q9UKK3 1724 aaKnown RBP31.64■■■□□ 2.66
GLI3-202ENST00000428534 EIF4A2Q14240 407 aaKnown RBP31.64■■■□□ 2.66
GLI3-202ENST00000428534 RALBP1Q15311 655 aa31.64■■■□□ 2.66
GLI3-202ENST00000428534 BAG6P46379 1132 aa31.62■■■□□ 2.65
GLI3-202ENST00000428534 RAPGEF4Q8WZA2 1011 aa31.62■■■□□ 2.65
GLI3-202ENST00000428534 CFAP53Q96M91 514 aa31.62■■■□□ 2.65
GLI3-202ENST00000428534 LRP5O75197 1615 aa31.6■■■□□ 2.65
GLI3-202ENST00000428534 PARD3Q8TEW0 1356 aa31.59■■■□□ 2.65
GLI3-202ENST00000428534 WNK3Q9BYP7 1800 aa31.59■■■□□ 2.65
GLI3-202ENST00000428534 FAM196AQ6ZSG2 479 aa31.59■■■□□ 2.65
GLI3-202ENST00000428534 EYA1Q99502 592 aa31.59■■■□□ 2.65
GLI3-202ENST00000428534 TATP17735 454 aaPredicted RBP31.58■■■□□ 2.65
GLI3-202ENST00000428534 PPP2R1AP30153 589 aa31.58■■■□□ 2.65
GLI3-202ENST00000428534 DIAPH1O60610 1272 aaKnown RBP31.56■■■□□ 2.64
GLI3-202ENST00000428534 EN1Q05925 392 aaPredicted RBP31.56■■■□□ 2.64
GLI3-202ENST00000428534 PSDA5PKW4 1024 aaPredicted RBP31.55■■■□□ 2.64
GLI3-202ENST00000428534 USHBP1Q8N6Y0 703 aa31.55■■■□□ 2.64
GLI3-202ENST00000428534 NCAPD2Q15021 1401 aa31.55■■■□□ 2.64
GLI3-202ENST00000428534 TNS2Q63HR2 1409 aa31.55■■■□□ 2.64
GLI3-202ENST00000428534 PLEKHG2Q9H7P9 1386 aa31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms