RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 ZRANB1Q9UGI0 708 aa11.63□□□□□ -0.55
TRIM43CP-201ENST00000422468 MON2Q7Z3U7 1717 aa11.63□□□□□ -0.55
TRIM43CP-201ENST00000422468 CD163L1Q9NR16 1453 aa11.63□□□□□ -0.55
TRIM43CP-201ENST00000422468 CPSF1Q10570 1443 aaKnown RBP11.62□□□□□ -0.55
TRIM43CP-201ENST00000422468 COL18A1P39060 1754 aa11.61□□□□□ -0.55
TRIM43CP-201ENST00000422468 TTC21BQ7Z4L5 1316 aa11.6□□□□□ -0.55
TRIM43CP-201ENST00000422468 TTC21AQ8NDW8 1320 aa11.6□□□□□ -0.55
TRIM43CP-201ENST00000422468 COL5A2P05997 1499 aaPredicted RBP11.6□□□□□ -0.55
TRIM43CP-201ENST00000422468 AATKQ6ZMQ8 1374 aa11.6□□□□□ -0.55
TRIM43CP-201ENST00000422468 KTN1Q86UP2 1357 aaKnown RBP11.6□□□□□ -0.55
TRIM43CP-201ENST00000422468 LARP1Q6PKG0 1096 aaKnown RBP11.6□□□□□ -0.55
TRIM43CP-201ENST00000422468 BARGINQ6ZT62 677 aa11.6□□□□□ -0.55
TRIM43CP-201ENST00000422468 DEFB132Q7Z7B7 95 aa11.6□□□□□ -0.55
TRIM43CP-201ENST00000422468 TNS1Q9HBL0 1735 aaKnown RBP11.6□□□□□ -0.55
TRIM43CP-201ENST00000422468 RGPD5Q99666 1765 aa11.59□□□□□ -0.55
TRIM43CP-201ENST00000422468 DSG3P32926 999 aa11.59□□□□□ -0.55
TRIM43CP-201ENST00000422468 FAM182BQ5T319 152 aa11.59□□□□□ -0.55
TRIM43CP-201ENST00000422468 USP35Q9P2H5 1018 aa11.59□□□□□ -0.55
TRIM43CP-201ENST00000422468 PARP4Q9UKK3 1724 aaKnown RBP11.58□□□□□ -0.56
TRIM43CP-201ENST00000422468 ZBTB7CA1YPR0 619 aa11.58□□□□□ -0.56
TRIM43CP-201ENST00000422468 TCP11L2Q8N4U5 519 aa11.58□□□□□ -0.56
TRIM43CP-201ENST00000422468 KCNH5Q8NCM2 988 aa11.58□□□□□ -0.56
TRIM43CP-201ENST00000422468 THRAP3Q9Y2W1 955 aaKnown RBP11.58□□□□□ -0.56
TRIM43CP-201ENST00000422468 CRB1P82279 1406 aa11.58□□□□□ -0.56
TRIM43CP-201ENST00000422468 MYOM1P52179 1685 aa11.58□□□□□ -0.56
TRIM43CP-201ENST00000422468 USP54Q70EL1 1684 aa11.58□□□□□ -0.56
TRIM43CP-201ENST00000422468 BAG6P46379 1132 aa11.57□□□□□ -0.56
TRIM43CP-201ENST00000422468 CLSPNQ9HAW4 1339 aa11.57□□□□□ -0.56
TRIM43CP-201ENST00000422468 NFAT5O94916 1531 aa11.56□□□□□ -0.56
TRIM43CP-201ENST00000422468 WNK3Q9BYP7 1800 aa11.56□□□□□ -0.56
TRIM43CP-201ENST00000422468 FAM196AQ6ZSG2 479 aa11.56□□□□□ -0.56
TRIM43CP-201ENST00000422468 ARHGEF25Q86VW2 580 aa11.56□□□□□ -0.56
TRIM43CP-201ENST00000422468 PUS7Q96PZ0 661 aaKnown RBP11.56□□□□□ -0.56
TRIM43CP-201ENST00000422468 DISP2A7MBM2 1401 aa11.55□□□□□ -0.56
TRIM43CP-201ENST00000422468 ST20-MTHFSA0A0A6YYL1 179 aa11.55□□□□□ -0.56
TRIM43CP-201ENST00000422468 SLC24A1O60721 1099 aa11.55□□□□□ -0.56
TRIM43CP-201ENST00000422468 PDE3BQ13370 1112 aa11.55□□□□□ -0.56
TRIM43CP-201ENST00000422468 HDGFL2Q7Z4V5 671 aaPredicted RBP11.55□□□□□ -0.56
TRIM43CP-201ENST00000422468 TMC1Q8TDI8 760 aa11.55□□□□□ -0.56
TRIM43CP-201ENST00000422468 ABCC6O95255 1503 aa11.55□□□□□ -0.56
TRIM43CP-201ENST00000422468 USP31Q70CQ4 1352 aa11.54□□□□□ -0.56
TRIM43CP-201ENST00000422468 USP47Q96K76 1375 aa11.54□□□□□ -0.56
TRIM43CP-201ENST00000422468 LTN1O94822 1766 aa11.54□□□□□ -0.56
TRIM43CP-201ENST00000422468 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.54□□□□□ -0.56
TRIM43CP-201ENST00000422468 SLC12A5Q9H2X9 1139 aa11.54□□□□□ -0.56
TRIM43CP-201ENST00000422468 TERF2IPQ9NYB0 399 aa11.54□□□□□ -0.56
TRIM43CP-201ENST00000422468 AXIN2Q9Y2T1 843 aa11.54□□□□□ -0.56
TRIM43CP-201ENST00000422468 WDR17Q8IZU2 1322 aa11.54□□□□□ -0.56
TRIM43CP-201ENST00000422468 LRRC37A3O60309 1634 aa11.53□□□□□ -0.56
TRIM43CP-201ENST00000422468 EDC4Q6P2E9 1401 aaKnown RBP11.53□□□□□ -0.56
TRIM43CP-201ENST00000422468 SOX12O15370 315 aa11.53□□□□□ -0.56
TRIM43CP-201ENST00000422468 EN1Q05925 392 aaPredicted RBP11.53□□□□□ -0.56
TRIM43CP-201ENST00000422468 TOM1L2Q6ZVM7 507 aa11.53□□□□□ -0.56
TRIM43CP-201ENST00000422468 CCER1Q8TC90 406 aaPredicted RBP11.53□□□□□ -0.56
TRIM43CP-201ENST00000422468 NINLQ9Y2I6 1382 aa11.53□□□□□ -0.56
TRIM43CP-201ENST00000422468 PEAK1Q9H792 1746 aa11.52□□□□□ -0.56
TRIM43CP-201ENST00000422468 SBF2Q86WG5 1849 aa11.52□□□□□ -0.57
TRIM43CP-201ENST00000422468 TRIM37O94972 964 aa11.52□□□□□ -0.57
TRIM43CP-201ENST00000422468 NME9Q86XW9 330 aa11.52□□□□□ -0.57
TRIM43CP-201ENST00000422468 A0A1W2PP64 1363 aa11.52□□□□□ -0.57
TRIM43CP-201ENST00000422468 C11orf95C9JLR9 678 aaPredicted RBP11.51□□□□□ -0.57
TRIM43CP-201ENST00000422468 RREB1Q92766 1687 aa11.5□□□□□ -0.57
TRIM43CP-201ENST00000422468 APBA3O96018 575 aa11.5□□□□□ -0.57
TRIM43CP-201ENST00000422468 CAMKK2Q96RR4 588 aa11.5□□□□□ -0.57
TRIM43CP-201ENST00000422468 CDCA7Q9BWT1 371 aaPredicted RBP11.5□□□□□ -0.57
TRIM43CP-201ENST00000422468 CARD10Q9BWT7 1032 aa11.5□□□□□ -0.57
TRIM43CP-201ENST00000422468 PARD3Q8TEW0 1356 aa11.5□□□□□ -0.57
TRIM43CP-201ENST00000422468 LRP5O75197 1615 aa11.49□□□□□ -0.57
TRIM43CP-201ENST00000422468 CSB-PGBD3P0DP91 1061 aa11.49□□□□□ -0.57
TRIM43CP-201ENST00000422468 EZH2Q15910 746 aaKnown RBP11.49□□□□□ -0.57
TRIM43CP-201ENST00000422468 DDB1Q16531 1140 aa11.49□□□□□ -0.57
TRIM43CP-201ENST00000422468 TIMELESSQ9UNS1 1208 aa11.49□□□□□ -0.57
TRIM43CP-201ENST00000422468 OVOS2A0A0G2JMS6 1433 aa11.49□□□□□ -0.57
TRIM43CP-201ENST00000422468 OVOS2A0A0J9YW53 1432 aa11.49□□□□□ -0.57
TRIM43CP-201ENST00000422468 OVOS2Q6IE36 1432 aa11.49□□□□□ -0.57
TRIM43CP-201ENST00000422468 PSDA5PKW4 1024 aaPredicted RBP11.48□□□□□ -0.57
TRIM43CP-201ENST00000422468 CCDC7Q96M83 1385 aa11.48□□□□□ -0.57
TRIM43CP-201ENST00000422468 NUP188Q5SRE5 1749 aa11.48□□□□□ -0.57
TRIM43CP-201ENST00000422468 RGPD3A6NKT7 1758 aaPredicted RBP11.48□□□□□ -0.57
TRIM43CP-201ENST00000422468 RGPD4Q7Z3J3 1758 aa11.48□□□□□ -0.57
TRIM43CP-201ENST00000422468 TMF1P82094 1093 aa11.47□□□□□ -0.57
TRIM43CP-201ENST00000422468 FAM208AQ9UK61 1670 aaKnown RBP11.46□□□□□ -0.57
TRIM43CP-201ENST00000422468 ANKRD36BQ8N2N9 1353 aa11.46□□□□□ -0.57
TRIM43CP-201ENST00000422468 ERBB3P21860 1342 aa11.46□□□□□ -0.57
TRIM43CP-201ENST00000422468 BCL9O00512 1426 aa11.45□□□□□ -0.58
TRIM43CP-201ENST00000422468 EXOC5O00471 708 aa11.45□□□□□ -0.58
TRIM43CP-201ENST00000422468 HSPA5P11021 654 aaKnown RBP11.45□□□□□ -0.58
TRIM43CP-201ENST00000422468 R3HDM1Q15032 1099 aaKnown RBP11.45□□□□□ -0.58
TRIM43CP-201ENST00000422468 MARCH10Q8NA82 808 aaPredicted RBP11.45□□□□□ -0.58
TRIM43CP-201ENST00000422468 ANKRD24Q8TF21 1146 aa11.45□□□□□ -0.58
TRIM43CP-201ENST00000422468 FBXO3Q9UK99 471 aa11.45□□□□□ -0.58
TRIM43CP-201ENST00000422468 KIF20BQ96Q89 1820 aa11.44□□□□□ -0.58
TRIM43CP-201ENST00000422468 CDCA8Q53HL2 280 aa11.44□□□□□ -0.58
TRIM43CP-201ENST00000422468 COG3Q96JB2 828 aa11.44□□□□□ -0.58
TRIM43CP-201ENST00000422468 CARD14Q9BXL6 1004 aa11.44□□□□□ -0.58
TRIM43CP-201ENST00000422468 NLRP2Q9NX02 1062 aa11.44□□□□□ -0.58
TRIM43CP-201ENST00000422468 TNS2Q63HR2 1409 aa11.43□□□□□ -0.58
TRIM43CP-201ENST00000422468 IP6K1Q92551 441 aa11.43□□□□□ -0.58
TRIM43CP-201ENST00000422468 BCL11BQ9C0K0 894 aaPredicted RBP11.43□□□□□ -0.58
TRIM43CP-201ENST00000422468 PLSCR1O15162 318 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms