RNA–Protein interactions for RNA: ENST00000421339.3

TBC1D1-207, Transcript of TBC1 domain family member 1, humanhuman

TSL 5

Gene TBC1D1, Length 679 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-207ENST00000421339 BARGINQ6ZT62 677 aa11.86□□□□□ -0.51
TBC1D1-207ENST00000421339 PRAM1Q96QH2 718 aa11.86□□□□□ -0.51
TBC1D1-207ENST00000421339 PRDM11Q9NQV5 511 aa11.86□□□□□ -0.51
TBC1D1-207ENST00000421339 EIF3AQ14152 1382 aaKnown RBP11.86□□□□□ -0.51
TBC1D1-207ENST00000421339 LMO7Q8WWI1 1683 aa11.86□□□□□ -0.51
TBC1D1-207ENST00000421339 ITSN1Q15811 1721 aa11.86□□□□□ -0.51
TBC1D1-207ENST00000421339 TULP4Q9NRJ4 1543 aa11.86□□□□□ -0.51
TBC1D1-207ENST00000421339 KIAA0232Q92628 1395 aa11.85□□□□□ -0.51
TBC1D1-207ENST00000421339 PANK3Q9H999 370 aa11.85□□□□□ -0.51
TBC1D1-207ENST00000421339 SAFB2Q14151 953 aaKnown RBP eCLIP11.84□□□□□ -0.51
TBC1D1-207ENST00000421339 CDCA8Q53HL2 280 aa11.84□□□□□ -0.51
TBC1D1-207ENST00000421339 CFAP70Q5T0N1 1121 aa11.84□□□□□ -0.51
TBC1D1-207ENST00000421339 SSH2Q76I76 1423 aa11.84□□□□□ -0.51
TBC1D1-207ENST00000421339 PDE3BQ13370 1112 aa11.83□□□□□ -0.52
TBC1D1-207ENST00000421339 CHRNA2Q15822 529 aa11.83□□□□□ -0.52
TBC1D1-207ENST00000421339 ADGRB1O14514 1584 aa11.83□□□□□ -0.52
TBC1D1-207ENST00000421339 NPC1L1Q9UHC9 1359 aa11.82□□□□□ -0.52
TBC1D1-207ENST00000421339 STRN4Q9NRL3 753 aa11.82□□□□□ -0.52
TBC1D1-207ENST00000421339 SENP3-EIF4A1A0A087X0R7 540 aa11.81□□□□□ -0.52
TBC1D1-207ENST00000421339 PLSCR1O15162 318 aa11.81□□□□□ -0.52
TBC1D1-207ENST00000421339 PTGER2P43116 358 aa11.81□□□□□ -0.52
TBC1D1-207ENST00000421339 C1QTNF8P60827 252 aa11.81□□□□□ -0.52
TBC1D1-207ENST00000421339 PDGFDQ9GZP0 370 aaPredicted RBP11.81□□□□□ -0.52
TBC1D1-207ENST00000421339 ANO8Q9HCE9 1232 aaPredicted RBP11.81□□□□□ -0.52
TBC1D1-207ENST00000421339 WNK3Q9BYP7 1800 aa11.81□□□□□ -0.52
TBC1D1-207ENST00000421339 SBNO2Q9Y2G9 1366 aa11.8□□□□□ -0.52
TBC1D1-207ENST00000421339 LRRC37A3O60309 1634 aa11.8□□□□□ -0.52
TBC1D1-207ENST00000421339 SLC24A1O60721 1099 aa11.8□□□□□ -0.52
TBC1D1-207ENST00000421339 CC2D1BQ5T0F9 858 aaKnown RBP11.8□□□□□ -0.52
TBC1D1-207ENST00000421339 USP35Q9P2H5 1018 aa11.8□□□□□ -0.52
TBC1D1-207ENST00000421339 ATP7BP35670 1465 aa11.8□□□□□ -0.52
TBC1D1-207ENST00000421339 TOPAZ1Q8N9V7 1692 aa11.79□□□□□ -0.52
TBC1D1-207ENST00000421339 LARP1Q6PKG0 1096 aaKnown RBP11.79□□□□□ -0.52
TBC1D1-207ENST00000421339 TCP11L2Q8N4U5 519 aa11.79□□□□□ -0.52
TBC1D1-207ENST00000421339 POGKQ9P215 609 aa11.79□□□□□ -0.52
TBC1D1-207ENST00000421339 RBM19Q9Y4C8 960 aaKnown RBP11.79□□□□□ -0.52
TBC1D1-207ENST00000421339 AKAP12Q02952 1782 aa11.78□□□□□ -0.52
TBC1D1-207ENST00000421339 WASLO00401 505 aaPredicted RBP11.78□□□□□ -0.52
TBC1D1-207ENST00000421339 PAK3O75914 559 aaPredicted RBP11.78□□□□□ -0.52
TBC1D1-207ENST00000421339 ZC3H6P61129 1189 aaKnown RBP11.78□□□□□ -0.52
TBC1D1-207ENST00000421339 AMER1Q5JTC6 1135 aaPredicted RBP11.78□□□□□ -0.52
TBC1D1-207ENST00000421339 PROM2Q8N271 834 aa11.78□□□□□ -0.52
TBC1D1-207ENST00000421339 NGDNQ8NEJ9 315 aaKnown RBP11.78□□□□□ -0.52
TBC1D1-207ENST00000421339 ARHGEF28Q8N1W1 1705 aaKnown RBP11.77□□□□□ -0.52
TBC1D1-207ENST00000421339 SYT17Q9BSW7 474 aa11.77□□□□□ -0.53
TBC1D1-207ENST00000421339 THRAP3Q9Y2W1 955 aaKnown RBP11.77□□□□□ -0.53
TBC1D1-207ENST00000421339 CPDO75976 1380 aa11.77□□□□□ -0.53
TBC1D1-207ENST00000421339 OVOS2A0A0G2JMS6 1433 aa11.77□□□□□ -0.53
TBC1D1-207ENST00000421339 OVOS2A0A0J9YW53 1432 aa11.77□□□□□ -0.53
TBC1D1-207ENST00000421339 OVOS2Q6IE36 1432 aa11.77□□□□□ -0.53
TBC1D1-207ENST00000421339 PPP2R1AP30153 589 aa11.76□□□□□ -0.53
TBC1D1-207ENST00000421339 EVA1CP58658 441 aa11.76□□□□□ -0.53
TBC1D1-207ENST00000421339 SGIP1Q9BQI5 828 aa11.76□□□□□ -0.53
TBC1D1-207ENST00000421339 KNSTRNQ9Y448 316 aa11.76□□□□□ -0.53
TBC1D1-207ENST00000421339 MINK1Q8N4C8 1332 aaPredicted RBP11.76□□□□□ -0.53
TBC1D1-207ENST00000421339 COL5A2P05997 1499 aaPredicted RBP11.76□□□□□ -0.53
TBC1D1-207ENST00000421339 ZBTB7AO95365 584 aa11.75□□□□□ -0.53
TBC1D1-207ENST00000421339 PTF1AQ7RTS3 328 aa11.75□□□□□ -0.53
TBC1D1-207ENST00000421339 QRICH2Q9H0J4 1663 aa11.75□□□□□ -0.53
TBC1D1-207ENST00000421339 COL18A1P39060 1754 aa11.74□□□□□ -0.53
TBC1D1-207ENST00000421339 B4GALNT3Q6L9W6 998 aa11.74□□□□□ -0.53
TBC1D1-207ENST00000421339 FHDC1Q9C0D6 1143 aaPredicted RBP11.74□□□□□ -0.53
TBC1D1-207ENST00000421339 TRAK1Q9UPV9 953 aa11.74□□□□□ -0.53
TBC1D1-207ENST00000421339 POLR3AO14802 1390 aaPredicted RBP11.74□□□□□ -0.53
TBC1D1-207ENST00000421339 COL24A1Q17RW2 1714 aa11.74□□□□□ -0.53
TBC1D1-207ENST00000421339 BCL9O00512 1426 aa11.73□□□□□ -0.53
TBC1D1-207ENST00000421339 USP19O94966 1318 aa11.73□□□□□ -0.53
TBC1D1-207ENST00000421339 NUTM2GQ5VZR2 741 aa11.73□□□□□ -0.53
TBC1D1-207ENST00000421339 NUDT16Q96DE0 195 aaKnown RBP11.73□□□□□ -0.53
TBC1D1-207ENST00000421339 BCL11BQ9C0K0 894 aaPredicted RBP11.73□□□□□ -0.53
TBC1D1-207ENST00000421339 ATF5Q9Y2D1 282 aaPredicted RBP11.73□□□□□ -0.53
TBC1D1-207ENST00000421339 RGPD5Q99666 1765 aa11.72□□□□□ -0.53
TBC1D1-207ENST00000421339 CRB1P82279 1406 aa11.72□□□□□ -0.53
TBC1D1-207ENST00000421339 RRP1P56182 461 aaKnown RBP11.72□□□□□ -0.53
TBC1D1-207ENST00000421339 SHANK3Q9BYB0 1731 aa11.72□□□□□ -0.53
TBC1D1-207ENST00000421339 PAPPAQ13219 1627 aa11.71□□□□□ -0.53
TBC1D1-207ENST00000421339 MAP3K5Q99683 1374 aa11.71□□□□□ -0.53
TBC1D1-207ENST00000421339 CENPJQ9HC77 1338 aaPredicted RBP11.71□□□□□ -0.53
TBC1D1-207ENST00000421339 RCAN3Q9UKA8 241 aa11.71□□□□□ -0.53
TBC1D1-207ENST00000421339 CEP350Q5VT06 3117 aa11.71□□□□□ -0.53
TBC1D1-207ENST00000421339 ACEP12821 1306 aa11.7□□□□□ -0.54
TBC1D1-207ENST00000421339 FANCIQ9NVI1 1328 aa11.7□□□□□ -0.54
TBC1D1-207ENST00000421339 SLC15A2Q16348 729 aa11.7□□□□□ -0.54
TBC1D1-207ENST00000421339 MTFR1LQ9H019 292 aa11.7□□□□□ -0.54
TBC1D1-207ENST00000421339 QSER1Q2KHR3 1735 aa11.69□□□□□ -0.54
TBC1D1-207ENST00000421339 AATKQ6ZMQ8 1374 aa11.69□□□□□ -0.54
TBC1D1-207ENST00000421339 TXNRD1Q16881 649 aa11.69□□□□□ -0.54
TBC1D1-207ENST00000421339 NHSQ6T4R5 1651 aa11.68□□□□□ -0.54
TBC1D1-207ENST00000421339 PLEKHG3A1L390 1219 aa11.68□□□□□ -0.54
TBC1D1-207ENST00000421339 GCP02774 474 aa11.68□□□□□ -0.54
TBC1D1-207ENST00000421339 DDB1Q16531 1140 aa11.68□□□□□ -0.54
TBC1D1-207ENST00000421339 MARCH10Q8NA82 808 aaPredicted RBP11.68□□□□□ -0.54
TBC1D1-207ENST00000421339 ADAMTS8Q9UP79 889 aa11.68□□□□□ -0.54
TBC1D1-207ENST00000421339 ZNF521Q96K83 1311 aa11.67□□□□□ -0.54
TBC1D1-207ENST00000421339 GOLGB1Q14789 3259 aaKnown RBP11.67□□□□□ -0.54
TBC1D1-207ENST00000421339 WDR43Q15061 677 aaKnown RBP eCLIP11.67□□□□□ -0.54
TBC1D1-207ENST00000421339 ABTB2Q8N961 1025 aa11.67□□□□□ -0.54
TBC1D1-207ENST00000421339 CDCA7LQ96GN5 454 aa11.67□□□□□ -0.54
TBC1D1-207ENST00000421339 PUS7Q96PZ0 661 aaKnown RBP11.67□□□□□ -0.54
TBC1D1-207ENST00000421339 CARD14Q9BXL6 1004 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms