RNA–Protein interactions for RNA: ENST00000421058.1

PUDPP1-201, Transcript of pseudouridine 5'-phosphatase pseudogene 1, humanhuman

BASIC

Gene PUDPP1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPP1-201ENST00000421058 PHRF1Q9P1Y6 1649 aaKnown RBP11.23□□□□□ -0.61
PUDPP1-201ENST00000421058 A0A0G2JS52 829 aa11.22□□□□□ -0.61
PUDPP1-201ENST00000421058 HOXC9P31274 260 aa11.22□□□□□ -0.61
PUDPP1-201ENST00000421058 BLMP54132 1417 aaPredicted RBP11.22□□□□□ -0.61
PUDPP1-201ENST00000421058 RBM6P78332 1123 aaKnown RBP11.22□□□□□ -0.61
PUDPP1-201ENST00000421058 MYT1Q01538 1121 aa11.22□□□□□ -0.61
PUDPP1-201ENST00000421058 VPS72Q15906 364 aa11.22□□□□□ -0.61
PUDPP1-201ENST00000421058 LTV1Q96GA3 475 aaPredicted RBP11.22□□□□□ -0.61
PUDPP1-201ENST00000421058 NLRP2Q9NX02 1062 aa11.22□□□□□ -0.61
PUDPP1-201ENST00000421058 NUDCQ9Y266 331 aa11.22□□□□□ -0.61
PUDPP1-201ENST00000421058 MARF1Q9Y4F3 1742 aaKnown RBP11.22□□□□□ -0.61
PUDPP1-201ENST00000421058 USP54Q70EL1 1684 aa11.21□□□□□ -0.61
PUDPP1-201ENST00000421058 MTHFSP49914 203 aa11.21□□□□□ -0.61
PUDPP1-201ENST00000421058 ANKRD24Q8TF21 1146 aa11.21□□□□□ -0.61
PUDPP1-201ENST00000421058 GJD4Q96KN9 370 aaPredicted RBP11.21□□□□□ -0.61
PUDPP1-201ENST00000421058 CDCA7Q9BWT1 371 aaPredicted RBP11.21□□□□□ -0.61
PUDPP1-201ENST00000421058 POLKQ9UBT6 870 aa11.21□□□□□ -0.61
PUDPP1-201ENST00000421058 THRAP3Q9Y2W1 955 aaKnown RBP11.21□□□□□ -0.61
PUDPP1-201ENST00000421058 SLIT2O94813 1529 aa11.2□□□□□ -0.62
PUDPP1-201ENST00000421058 ABCC6O95255 1503 aa11.2□□□□□ -0.62
PUDPP1-201ENST00000421058 WDR17Q8IZU2 1322 aa11.2□□□□□ -0.62
PUDPP1-201ENST00000421058 FBLN1P23142 703 aa11.2□□□□□ -0.62
PUDPP1-201ENST00000421058 USP35Q9P2H5 1018 aa11.2□□□□□ -0.62
PUDPP1-201ENST00000421058 EMILIN1Q9Y6C2 1016 aa11.2□□□□□ -0.62
PUDPP1-201ENST00000421058 ABCA3Q99758 1704 aa11.2□□□□□ -0.62
PUDPP1-201ENST00000421058 ANKRD26Q9UPS8 1709 aa11.2□□□□□ -0.62
PUDPP1-201ENST00000421058 NFAT5O94916 1531 aa11.19□□□□□ -0.62
PUDPP1-201ENST00000421058 INSRP06213 1382 aa11.19□□□□□ -0.62
PUDPP1-201ENST00000421058 DIAPH1O60610 1272 aaKnown RBP11.19□□□□□ -0.62
PUDPP1-201ENST00000421058 NEFMP07197 916 aa11.19□□□□□ -0.62
PUDPP1-201ENST00000421058 HSP90AB2PQ58FF8 381 aa11.19□□□□□ -0.62
PUDPP1-201ENST00000421058 TCP11L2Q8N4U5 519 aa11.19□□□□□ -0.62
PUDPP1-201ENST00000421058 CARD10Q9BWT7 1032 aa11.19□□□□□ -0.62
PUDPP1-201ENST00000421058 AXIN2Q9Y2T1 843 aa11.19□□□□□ -0.62
PUDPP1-201ENST00000421058 NWD2Q9ULI1 1742 aa11.18□□□□□ -0.62
PUDPP1-201ENST00000421058 MYBBP1AQ9BQG0 1328 aaKnown RBP11.18□□□□□ -0.62
PUDPP1-201ENST00000421058 PPP2R1AP30153 589 aa11.18□□□□□ -0.62
PUDPP1-201ENST00000421058 LARP1Q6PKG0 1096 aaKnown RBP11.18□□□□□ -0.62
PUDPP1-201ENST00000421058 PNNQ9H307 717 aaKnown RBP11.18□□□□□ -0.62
PUDPP1-201ENST00000421058 BCL9LQ86UU0 1499 aa11.18□□□□□ -0.62
PUDPP1-201ENST00000421058 CRYBG1Q9Y4K1 1723 aa11.18□□□□□ -0.62
PUDPP1-201ENST00000421058 CRB1P82279 1406 aa11.18□□□□□ -0.62
PUDPP1-201ENST00000421058 ERBB3P21860 1342 aa11.17□□□□□ -0.62
PUDPP1-201ENST00000421058 RAPGEF4Q8WZA2 1011 aa11.17□□□□□ -0.62
PUDPP1-201ENST00000421058 PRKRIP1Q9H875 184 aaPredicted RBP11.17□□□□□ -0.62
PUDPP1-201ENST00000421058 LTN1O94822 1766 aa11.17□□□□□ -0.62
PUDPP1-201ENST00000421058 MAP2P11137 1827 aaKnown RBP11.16□□□□□ -0.62
PUDPP1-201ENST00000421058 SPATA31A5Q5VU36 1347 aa11.16□□□□□ -0.62
PUDPP1-201ENST00000421058 SPATA31A7Q8IWB4 1347 aa11.16□□□□□ -0.62
PUDPP1-201ENST00000421058 PDE3BQ13370 1112 aa11.16□□□□□ -0.62
PUDPP1-201ENST00000421058 COL5A2P05997 1499 aaPredicted RBP11.16□□□□□ -0.62
PUDPP1-201ENST00000421058 CAMTA1Q9Y6Y1 1673 aa11.16□□□□□ -0.62
PUDPP1-201ENST00000421058 PARD3Q8TEW0 1356 aa11.16□□□□□ -0.62
PUDPP1-201ENST00000421058 SPATA31A1Q5TZJ5 1347 aa11.15□□□□□ -0.62
PUDPP1-201ENST00000421058 PLCH1Q4KWH8 1693 aa11.15□□□□□ -0.62
PUDPP1-201ENST00000421058 EXOC5O00471 708 aa11.15□□□□□ -0.62
PUDPP1-201ENST00000421058 U2SURPO15042 1029 aaKnown RBP11.15□□□□□ -0.62
PUDPP1-201ENST00000421058 TATP17735 454 aaPredicted RBP11.15□□□□□ -0.62
PUDPP1-201ENST00000421058 FAM98CQ17RN3 349 aaKnown RBP11.15□□□□□ -0.62
PUDPP1-201ENST00000421058 DIEXFQ68CQ4 756 aaKnown RBP11.15□□□□□ -0.62
PUDPP1-201ENST00000421058 BARGINQ6ZT62 677 aa11.15□□□□□ -0.62
PUDPP1-201ENST00000421058 ATRNO75882 1429 aa11.15□□□□□ -0.62
PUDPP1-201ENST00000421058 IL2RBP14784 551 aa11.14□□□□□ -0.63
PUDPP1-201ENST00000421058 EIF4A2Q14240 407 aaKnown RBP11.14□□□□□ -0.63
PUDPP1-201ENST00000421058 POTEAQ6S8J7 498 aa11.14□□□□□ -0.63
PUDPP1-201ENST00000421058 RGS17Q9UGC6 210 aaPredicted RBP11.14□□□□□ -0.63
PUDPP1-201ENST00000421058 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.14□□□□□ -0.63
PUDPP1-201ENST00000421058 CDK12Q9NYV4 1490 aaPredicted RBP11.13□□□□□ -0.63
PUDPP1-201ENST00000421058 WDR43Q15061 677 aaKnown RBP eCLIP11.13□□□□□ -0.63
PUDPP1-201ENST00000421058 DDB1Q16531 1140 aa11.13□□□□□ -0.63
PUDPP1-201ENST00000421058 LMO7Q8WWI1 1683 aa11.12□□□□□ -0.63
PUDPP1-201ENST00000421058 ONECUT3O60422 494 aaPredicted RBP11.12□□□□□ -0.63
PUDPP1-201ENST00000421058 NBPF6Q5VWK0 638 aa11.12□□□□□ -0.63
PUDPP1-201ENST00000421058 SEPT12Q8IYM1 358 aa11.12□□□□□ -0.63
PUDPP1-201ENST00000421058 NBPF4Q96M43 638 aa11.12□□□□□ -0.63
PUDPP1-201ENST00000421058 SPG7Q9UQ90 795 aa11.12□□□□□ -0.63
PUDPP1-201ENST00000421058 COL18A1P39060 1754 aa11.11□□□□□ -0.63
PUDPP1-201ENST00000421058 U2AF1L5P0DN76 240 aaPredicted RBP11.11□□□□□ -0.63
PUDPP1-201ENST00000421058 IL13P35225 146 aa11.11□□□□□ -0.63
PUDPP1-201ENST00000421058 U2AF1Q01081 240 aaKnown RBP eCLIP11.11□□□□□ -0.63
PUDPP1-201ENST00000421058 PLEKHO1Q53GL0 409 aaPredicted RBP11.11□□□□□ -0.63
PUDPP1-201ENST00000421058 EYA1Q99502 592 aa11.11□□□□□ -0.63
PUDPP1-201ENST00000421058 FAM208AQ9UK61 1670 aaKnown RBP11.11□□□□□ -0.63
PUDPP1-201ENST00000421058 AMOTQ4VCS5 1084 aa11.1□□□□□ -0.63
PUDPP1-201ENST00000421058 SULT6B1Q6IMI4 303 aa11.1□□□□□ -0.63
PUDPP1-201ENST00000421058 KRT27Q7Z3Y8 459 aa11.1□□□□□ -0.63
PUDPP1-201ENST00000421058 NRAPQ86VF7 1730 aa11.09□□□□□ -0.63
PUDPP1-201ENST00000421058 RGPD5Q99666 1765 aa11.09□□□□□ -0.63
PUDPP1-201ENST00000421058 USHBP1Q8N6Y0 703 aa11.09□□□□□ -0.63
PUDPP1-201ENST00000421058 ZCRB1Q8TBF4 217 aaKnown RBP11.09□□□□□ -0.63
PUDPP1-201ENST00000421058 MRS2Q9HD23 443 aa11.09□□□□□ -0.63
PUDPP1-201ENST00000421058 FCHSD2O94868 740 aa11.08□□□□□ -0.64
PUDPP1-201ENST00000421058 HSP90AB1P08238 724 aaKnown RBP11.08□□□□□ -0.64
PUDPP1-201ENST00000421058 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.08□□□□□ -0.64
PUDPP1-201ENST00000421058 IGSF1Q8N6C5 1336 aa11.08□□□□□ -0.64
PUDPP1-201ENST00000421058 MAPK8IP3Q9UPT6 1336 aa11.08□□□□□ -0.64
PUDPP1-201ENST00000421058 SF3B2Q13435 895 aaKnown RBP11.07□□□□□ -0.64
PUDPP1-201ENST00000421058 C1orf141Q5JVX7 400 aa11.07□□□□□ -0.64
PUDPP1-201ENST00000421058 FAM196AQ6ZSG2 479 aa11.07□□□□□ -0.64
PUDPP1-201ENST00000421058 DDX54Q8TDD1 881 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms