RNA–Protein interactions for RNA: ENST00000418713.5

RPUSD3-202, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-202ENST00000418713 NSD2O96028 1365 aa27.15■■□□□ 1.94
RPUSD3-202ENST00000418713 CSB-PGBD3P0DP91 1061 aa27.15■■□□□ 1.94
RPUSD3-202ENST00000418713 NRAPQ86VF7 1730 aa27.15■■□□□ 1.94
RPUSD3-202ENST00000418713 AMPHP49418 695 aa27.14■■□□□ 1.94
RPUSD3-202ENST00000418713 SPATA31A1Q5TZJ5 1347 aa27.14■■□□□ 1.93
RPUSD3-202ENST00000418713 KIF20BQ96Q89 1820 aa27.13■■□□□ 1.93
RPUSD3-202ENST00000418713 TOM1L2Q6ZVM7 507 aa27.13■■□□□ 1.93
RPUSD3-202ENST00000418713 IP6K1Q92551 441 aa27.13■■□□□ 1.93
RPUSD3-202ENST00000418713 LMO7Q8WWI1 1683 aa27.13■■□□□ 1.93
RPUSD3-202ENST00000418713 WASHC2AQ641Q2 1341 aa27.13■■□□□ 1.93
RPUSD3-202ENST00000418713 LARP1Q6PKG0 1096 aaKnown RBP27.12■■□□□ 1.93
RPUSD3-202ENST00000418713 TCP11L2Q8N4U5 519 aa27.12■■□□□ 1.93
RPUSD3-202ENST00000418713 AXIN2Q9Y2T1 843 aa27.12■■□□□ 1.93
RPUSD3-202ENST00000418713 COL5A2P05997 1499 aaPredicted RBP27.12■■□□□ 1.93
RPUSD3-202ENST00000418713 A0A0G2JS52 829 aa27.11■■□□□ 1.93
RPUSD3-202ENST00000418713 MYT1Q01538 1121 aa27.11■■□□□ 1.93
RPUSD3-202ENST00000418713 BARGINQ6ZT62 677 aa27.11■■□□□ 1.93
RPUSD3-202ENST00000418713 WDR17Q8IZU2 1322 aa27.11■■□□□ 1.93
RPUSD3-202ENST00000418713 SEPT12Q8IYM1 358 aa27.1■■□□□ 1.93
RPUSD3-202ENST00000418713 KIF24Q5T7B8 1368 aa27.09■■□□□ 1.93
RPUSD3-202ENST00000418713 RGS12O14924 1447 aa27.09■■□□□ 1.93
RPUSD3-202ENST00000418713 BLMP54132 1417 aaPredicted RBP27.09■■□□□ 1.93
RPUSD3-202ENST00000418713 CRB1P82279 1406 aa27.09■■□□□ 1.93
RPUSD3-202ENST00000418713 FAM98CQ17RN3 349 aaKnown RBP27.09■■□□□ 1.93
RPUSD3-202ENST00000418713 USP35Q9P2H5 1018 aa27.09■■□□□ 1.93
RPUSD3-202ENST00000418713 COL18A1P39060 1754 aa27.08■■□□□ 1.93
RPUSD3-202ENST00000418713 CDCA7Q9BWT1 371 aaPredicted RBP27.08■■□□□ 1.93
RPUSD3-202ENST00000418713 GLI3P10071 1580 aa27.08■■□□□ 1.93
RPUSD3-202ENST00000418713 MAP3K19Q56UN5 1328 aa27.07■■□□□ 1.92
RPUSD3-202ENST00000418713 RTL1A6NKG5 1358 aa27.07■■□□□ 1.92
RPUSD3-202ENST00000418713 CARD10Q9BWT7 1032 aa27.06■■□□□ 1.92
RPUSD3-202ENST00000418713 LTN1O94822 1766 aa27.06■■□□□ 1.92
RPUSD3-202ENST00000418713 MORC1Q86VD1 984 aa27.05■■□□□ 1.92
RPUSD3-202ENST00000418713 HOXC9P31274 260 aa27.04■■□□□ 1.92
RPUSD3-202ENST00000418713 ANKRD24Q8TF21 1146 aa27.04■■□□□ 1.92
RPUSD3-202ENST00000418713 ERBB3P21860 1342 aa27.03■■□□□ 1.92
RPUSD3-202ENST00000418713 RRS1Q15050 365 aaKnown RBP27.03■■□□□ 1.92
RPUSD3-202ENST00000418713 PER1O15534 1290 aaPredicted RBP27.02■■□□□ 1.92
RPUSD3-202ENST00000418713 KRT27Q7Z3Y8 459 aa27.02■■□□□ 1.92
RPUSD3-202ENST00000418713 NLRP2Q9NX02 1062 aa27.02■■□□□ 1.92
RPUSD3-202ENST00000418713 SMG6Q86US8 1419 aaKnown RBP27■■□□□ 1.91
RPUSD3-202ENST00000418713 FLT4P35916 1363 aa27■■□□□ 1.91
RPUSD3-202ENST00000418713 FBLN1P23142 703 aa26.99■■□□□ 1.91
RPUSD3-202ENST00000418713 AMER1Q5JTC6 1135 aaPredicted RBP26.99■■□□□ 1.91
RPUSD3-202ENST00000418713 PDE3BQ13370 1112 aa26.98■■□□□ 1.91
RPUSD3-202ENST00000418713 RGPD5Q99666 1765 aa26.98■■□□□ 1.91
RPUSD3-202ENST00000418713 NPC1L1Q9UHC9 1359 aa26.97■■□□□ 1.91
RPUSD3-202ENST00000418713 PPM1GO15355 546 aaPredicted RBP26.97■■□□□ 1.91
RPUSD3-202ENST00000418713 CCDC125Q86Z20 511 aa26.97■■□□□ 1.91
RPUSD3-202ENST00000418713 LTV1Q96GA3 475 aaPredicted RBP26.97■■□□□ 1.91
RPUSD3-202ENST00000418713 INSRP06213 1382 aa26.97■■□□□ 1.91
RPUSD3-202ENST00000418713 ANKRD26Q9UPS8 1709 aa26.96■■□□□ 1.91
RPUSD3-202ENST00000418713 TNNT2P45379 298 aaPredicted RBP26.96■■□□□ 1.91
RPUSD3-202ENST00000418713 POLKQ9UBT6 870 aa26.94■■□□□ 1.9
RPUSD3-202ENST00000418713 DDB1Q16531 1140 aa26.93■■□□□ 1.9
RPUSD3-202ENST00000418713 EMILIN1Q9Y6C2 1016 aa26.93■■□□□ 1.9
RPUSD3-202ENST00000418713 HSP90AB2PQ58FF8 381 aa26.92■■□□□ 1.9
RPUSD3-202ENST00000418713 MAP2P11137 1827 aaKnown RBP26.91■■□□□ 1.9
RPUSD3-202ENST00000418713 EXOC5O00471 708 aa26.91■■□□□ 1.9
RPUSD3-202ENST00000418713 CC2D1BQ5T0F9 858 aaKnown RBP26.91■■□□□ 1.9
RPUSD3-202ENST00000418713 FAM208AQ9UK61 1670 aaKnown RBP26.9■■□□□ 1.9
RPUSD3-202ENST00000418713 IL2RBP14784 551 aa26.9■■□□□ 1.9
RPUSD3-202ENST00000418713 UPF1Q92900 1129 aaKnown RBP eCLIP26.9■■□□□ 1.9
RPUSD3-202ENST00000418713 THSD7AQ9UPZ6 1657 aa26.89■■□□□ 1.9
RPUSD3-202ENST00000418713 FAM196AQ6ZSG2 479 aa26.89■■□□□ 1.9
RPUSD3-202ENST00000418713 SF3B2Q13435 895 aaKnown RBP26.87■■□□□ 1.89
RPUSD3-202ENST00000418713 BRWD3Q6RI45 1802 aa26.86■■□□□ 1.89
RPUSD3-202ENST00000418713 NBPF6Q5VWK0 638 aa26.83■■□□□ 1.89
RPUSD3-202ENST00000418713 RAPGEF4Q8WZA2 1011 aa26.83■■□□□ 1.89
RPUSD3-202ENST00000418713 NBPF4Q96M43 638 aa26.83■■□□□ 1.89
RPUSD3-202ENST00000418713 PARP4Q9UKK3 1724 aaKnown RBP26.82■■□□□ 1.88
RPUSD3-202ENST00000418713 DISP2A7MBM2 1401 aa26.8■■□□□ 1.88
RPUSD3-202ENST00000418713 PEAK1Q9H792 1746 aa26.79■■□□□ 1.88
RPUSD3-202ENST00000418713 TATP17735 454 aaPredicted RBP26.79■■□□□ 1.88
RPUSD3-202ENST00000418713 MTHFSP49914 203 aa26.79■■□□□ 1.88
RPUSD3-202ENST00000418713 DDX10Q13206 875 aaKnown RBP26.78■■□□□ 1.88
RPUSD3-202ENST00000418713 CNGB1Q14028 1251 aaPredicted RBP26.77■■□□□ 1.88
RPUSD3-202ENST00000418713 EIF4A2Q14240 407 aaKnown RBP26.76■■□□□ 1.87
RPUSD3-202ENST00000418713 OVOS2A0A0G2JMS6 1433 aa26.75■■□□□ 1.87
RPUSD3-202ENST00000418713 WNK3Q9BYP7 1800 aa26.75■■□□□ 1.87
RPUSD3-202ENST00000418713 CFAP53Q96M91 514 aa26.75■■□□□ 1.87
RPUSD3-202ENST00000418713 ZCRB1Q8TBF4 217 aaKnown RBP26.74■■□□□ 1.87
RPUSD3-202ENST00000418713 EYA1Q99502 592 aa26.74■■□□□ 1.87
RPUSD3-202ENST00000418713 TNS2Q63HR2 1409 aa26.73■■□□□ 1.87
RPUSD3-202ENST00000418713 ZNF316A6NFI3 1004 aaPredicted RBP26.73■■□□□ 1.87
RPUSD3-202ENST00000418713 BAG6P46379 1132 aa26.72■■□□□ 1.87
RPUSD3-202ENST00000418713 FAM182BQ5T319 152 aa26.72■■□□□ 1.87
RPUSD3-202ENST00000418713 USHBP1Q8N6Y0 703 aa26.72■■□□□ 1.87
RPUSD3-202ENST00000418713 MARCH10Q8NA82 808 aaPredicted RBP26.72■■□□□ 1.87
RPUSD3-202ENST00000418713 LRRC37A3O60309 1634 aa26.71■■□□□ 1.87
RPUSD3-202ENST00000418713 BCL9O00512 1426 aa26.71■■□□□ 1.87
RPUSD3-202ENST00000418713 DIAPH1O60610 1272 aaKnown RBP26.7■■□□□ 1.86
RPUSD3-202ENST00000418713 RALBP1Q15311 655 aa26.7■■□□□ 1.86
RPUSD3-202ENST00000418713 PLEKHG2Q9H7P9 1386 aa26.7■■□□□ 1.86
RPUSD3-202ENST00000418713 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.69■■□□□ 1.86
RPUSD3-202ENST00000418713 SPG7Q9UQ90 795 aa26.69■■□□□ 1.86
RPUSD3-202ENST00000418713 RGPD2P0DJD1 1756 aa26.69■■□□□ 1.86
RPUSD3-202ENST00000418713 TRIM37O94972 964 aa26.68■■□□□ 1.86
RPUSD3-202ENST00000418713 DDX54Q8TDD1 881 aaKnown RBP26.68■■□□□ 1.86
RPUSD3-202ENST00000418713 IL13P35225 146 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms