RNA–Protein interactions for RNA: ENST00000417902.5

HDAC7-205, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-205ENST00000417902 USP54Q70EL1 1684 aa24.79■■□□□ 1.56
HDAC7-205ENST00000417902 NRAPQ86VF7 1730 aa24.79■■□□□ 1.56
HDAC7-205ENST00000417902 USP35Q9P2H5 1018 aa24.79■■□□□ 1.56
HDAC7-205ENST00000417902 GLI3P10071 1580 aa24.79■■□□□ 1.56
HDAC7-205ENST00000417902 FBLN1P23142 703 aa24.78■■□□□ 1.56
HDAC7-205ENST00000417902 ZEB1P37275 1124 aaPredicted RBP24.78■■□□□ 1.56
HDAC7-205ENST00000417902 LMO7Q8WWI1 1683 aa24.78■■□□□ 1.56
HDAC7-205ENST00000417902 A0A0G2JS52 829 aa24.77■■□□□ 1.56
HDAC7-205ENST00000417902 CSB-PGBD3P0DP91 1061 aa24.77■■□□□ 1.56
HDAC7-205ENST00000417902 MYT1Q01538 1121 aa24.77■■□□□ 1.56
HDAC7-205ENST00000417902 TOM1L2Q6ZVM7 507 aa24.77■■□□□ 1.56
HDAC7-205ENST00000417902 TCP11L2Q8N4U5 519 aa24.77■■□□□ 1.56
HDAC7-205ENST00000417902 IP6K1Q92551 441 aa24.77■■□□□ 1.56
HDAC7-205ENST00000417902 CCDC7Q96M83 1385 aa24.77■■□□□ 1.56
HDAC7-205ENST00000417902 COL5A2P05997 1499 aaPredicted RBP24.77■■□□□ 1.56
HDAC7-205ENST00000417902 AMPHP49418 695 aa24.76■■□□□ 1.55
HDAC7-205ENST00000417902 THRAP3Q9Y2W1 955 aaKnown RBP24.76■■□□□ 1.55
HDAC7-205ENST00000417902 KNSTRNQ9Y448 316 aa24.76■■□□□ 1.55
HDAC7-205ENST00000417902 WASHC2AQ641Q2 1341 aa24.76■■□□□ 1.55
HDAC7-205ENST00000417902 BARGINQ6ZT62 677 aa24.75■■□□□ 1.55
HDAC7-205ENST00000417902 MAP3K19Q56UN5 1328 aa24.75■■□□□ 1.55
HDAC7-205ENST00000417902 WDR17Q8IZU2 1322 aa24.75■■□□□ 1.55
HDAC7-205ENST00000417902 COL18A1P39060 1754 aa24.73■■□□□ 1.55
HDAC7-205ENST00000417902 CRB1P82279 1406 aa24.73■■□□□ 1.55
HDAC7-205ENST00000417902 RRS1Q15050 365 aaKnown RBP24.72■■□□□ 1.55
HDAC7-205ENST00000417902 ANKRD24Q8TF21 1146 aa24.71■■□□□ 1.55
HDAC7-205ENST00000417902 CARD10Q9BWT7 1032 aa24.71■■□□□ 1.55
HDAC7-205ENST00000417902 ABCC6O95255 1503 aa24.71■■□□□ 1.55
HDAC7-205ENST00000417902 HOXC9P31274 260 aa24.7■■□□□ 1.54
HDAC7-205ENST00000417902 KRT27Q7Z3Y8 459 aa24.7■■□□□ 1.54
HDAC7-205ENST00000417902 ERBB3P21860 1342 aa24.68■■□□□ 1.54
HDAC7-205ENST00000417902 UPF1Q92900 1129 aaKnown RBP eCLIP24.68■■□□□ 1.54
HDAC7-205ENST00000417902 BLMP54132 1417 aaPredicted RBP24.68■■□□□ 1.54
HDAC7-205ENST00000417902 PER1O15534 1290 aaPredicted RBP24.67■■□□□ 1.54
HDAC7-205ENST00000417902 NLRP2Q9NX02 1062 aa24.67■■□□□ 1.54
HDAC7-205ENST00000417902 NSD2O96028 1365 aa24.67■■□□□ 1.54
HDAC7-205ENST00000417902 MORC1Q86VD1 984 aa24.66■■□□□ 1.54
HDAC7-205ENST00000417902 LTV1Q96GA3 475 aaPredicted RBP24.66■■□□□ 1.54
HDAC7-205ENST00000417902 CDCA7Q9BWT1 371 aaPredicted RBP24.65■■□□□ 1.54
HDAC7-205ENST00000417902 KIF20BQ96Q89 1820 aa24.65■■□□□ 1.54
HDAC7-205ENST00000417902 RTL1A6NKG5 1358 aa24.65■■□□□ 1.54
HDAC7-205ENST00000417902 TNNT2P45379 298 aaPredicted RBP24.64■■□□□ 1.54
HDAC7-205ENST00000417902 AMER1Q5JTC6 1135 aaPredicted RBP24.64■■□□□ 1.54
HDAC7-205ENST00000417902 PDE3BQ13370 1112 aa24.63■■□□□ 1.53
HDAC7-205ENST00000417902 EMILIN1Q9Y6C2 1016 aa24.63■■□□□ 1.53
HDAC7-205ENST00000417902 KIF24Q5T7B8 1368 aa24.63■■□□□ 1.53
HDAC7-205ENST00000417902 PPM1GO15355 546 aaPredicted RBP24.62■■□□□ 1.53
HDAC7-205ENST00000417902 HSP90AB2PQ58FF8 381 aa24.62■■□□□ 1.53
HDAC7-205ENST00000417902 POLKQ9UBT6 870 aa24.62■■□□□ 1.53
HDAC7-205ENST00000417902 LTN1O94822 1766 aa24.62■■□□□ 1.53
HDAC7-205ENST00000417902 FLT4P35916 1363 aa24.6■■□□□ 1.53
HDAC7-205ENST00000417902 RGPD5Q99666 1765 aa24.59■■□□□ 1.53
HDAC7-205ENST00000417902 INSRP06213 1382 aa24.59■■□□□ 1.53
HDAC7-205ENST00000417902 CCDC125Q86Z20 511 aa24.59■■□□□ 1.53
HDAC7-205ENST00000417902 DDB1Q16531 1140 aa24.58■■□□□ 1.53
HDAC7-205ENST00000417902 THSD7AQ9UPZ6 1657 aa24.57■■□□□ 1.52
HDAC7-205ENST00000417902 EXOC5O00471 708 aa24.56■■□□□ 1.52
HDAC7-205ENST00000417902 CC2D1BQ5T0F9 858 aaKnown RBP24.56■■□□□ 1.52
HDAC7-205ENST00000417902 FAM182BQ5T319 152 aa24.56■■□□□ 1.52
HDAC7-205ENST00000417902 IL2RBP14784 551 aa24.55■■□□□ 1.52
HDAC7-205ENST00000417902 FAM196AQ6ZSG2 479 aa24.55■■□□□ 1.52
HDAC7-205ENST00000417902 BRWD3Q6RI45 1802 aa24.54■■□□□ 1.52
HDAC7-205ENST00000417902 SMG6Q86US8 1419 aaKnown RBP24.54■■□□□ 1.52
HDAC7-205ENST00000417902 NBPF6Q5VWK0 638 aa24.54■■□□□ 1.52
HDAC7-205ENST00000417902 NBPF4Q96M43 638 aa24.54■■□□□ 1.52
HDAC7-205ENST00000417902 NPC1L1Q9UHC9 1359 aa24.53■■□□□ 1.52
HDAC7-205ENST00000417902 DISP2A7MBM2 1401 aa24.52■■□□□ 1.52
HDAC7-205ENST00000417902 SF3B2Q13435 895 aaKnown RBP24.51■■□□□ 1.51
HDAC7-205ENST00000417902 CNGB1Q14028 1251 aaPredicted RBP24.5■■□□□ 1.51
HDAC7-205ENST00000417902 MARCH10Q8NA82 808 aaPredicted RBP24.48■■□□□ 1.51
HDAC7-205ENST00000417902 ANKRD26Q9UPS8 1709 aa24.48■■□□□ 1.51
HDAC7-205ENST00000417902 PEAK1Q9H792 1746 aa24.47■■□□□ 1.51
HDAC7-205ENST00000417902 USHBP1Q8N6Y0 703 aa24.47■■□□□ 1.51
HDAC7-205ENST00000417902 EIF4A2Q14240 407 aaKnown RBP24.46■■□□□ 1.51
HDAC7-205ENST00000417902 MAP2P11137 1827 aaKnown RBP24.46■■□□□ 1.51
HDAC7-205ENST00000417902 PARP4Q9UKK3 1724 aaKnown RBP24.45■■□□□ 1.5
HDAC7-205ENST00000417902 MTHFSP49914 203 aa24.45■■□□□ 1.5
HDAC7-205ENST00000417902 RAPGEF4Q8WZA2 1011 aa24.45■■□□□ 1.5
HDAC7-205ENST00000417902 EYA1Q99502 592 aa24.45■■□□□ 1.5
HDAC7-205ENST00000417902 TRIM37O94972 964 aa24.43■■□□□ 1.5
HDAC7-205ENST00000417902 TATP17735 454 aaPredicted RBP24.43■■□□□ 1.5
HDAC7-205ENST00000417902 ZCRB1Q8TBF4 217 aaKnown RBP24.42■■□□□ 1.5
HDAC7-205ENST00000417902 FAM208AQ9UK61 1670 aaKnown RBP24.42■■□□□ 1.5
HDAC7-205ENST00000417902 OVOS2A0A0G2JMS6 1433 aa24.42■■□□□ 1.5
HDAC7-205ENST00000417902 DDX10Q13206 875 aaKnown RBP24.41■■□□□ 1.5
HDAC7-205ENST00000417902 DDX54Q8TDD1 881 aaKnown RBP24.4■■□□□ 1.5
HDAC7-205ENST00000417902 TNS2Q63HR2 1409 aa24.4■■□□□ 1.5
HDAC7-205ENST00000417902 BAG6P46379 1132 aa24.39■■□□□ 1.49
HDAC7-205ENST00000417902 DEFB132Q7Z7B7 95 aa24.39■■□□□ 1.49
HDAC7-205ENST00000417902 LRRC37A3O60309 1634 aa24.39■■□□□ 1.49
HDAC7-205ENST00000417902 BCL9O00512 1426 aa24.36■■□□□ 1.49
HDAC7-205ENST00000417902 APBA3O96018 575 aa24.36■■□□□ 1.49
HDAC7-205ENST00000417902 IL13P35225 146 aa24.36■■□□□ 1.49
HDAC7-205ENST00000417902 WNK3Q9BYP7 1800 aa24.35■■□□□ 1.49
HDAC7-205ENST00000417902 BCL11BQ9C0K0 894 aaPredicted RBP24.35■■□□□ 1.49
HDAC7-205ENST00000417902 MEGF6O75095 1541 aa24.35■■□□□ 1.49
HDAC7-205ENST00000417902 IGSF1Q8N6C5 1336 aa24.35■■□□□ 1.49
HDAC7-205ENST00000417902 NCAPD2Q15021 1401 aa24.34■■□□□ 1.49
HDAC7-205ENST00000417902 RGPD2P0DJD1 1756 aa24.34■■□□□ 1.49
HDAC7-205ENST00000417902 DIAPH1O60610 1272 aaKnown RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms