RNA–Protein interactions for RNA: ENST00000417295.6

SH3GL1-202, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

TSL 2 BASIC

Gene SH3GL1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-202ENST00000417295 SPATA31A1Q5TZJ5 1347 aa39.57■■■■□ 3.93
SH3GL1-202ENST00000417295 FAM98CQ17RN3 349 aaKnown RBP39.57■■■■□ 3.92
SH3GL1-202ENST00000417295 SEPT12Q8IYM1 358 aa39.55■■■■□ 3.92
SH3GL1-202ENST00000417295 COL18A1P39060 1754 aa39.55■■■■□ 3.92
SH3GL1-202ENST00000417295 PANK3Q9H999 370 aa39.54■■■■□ 3.92
SH3GL1-202ENST00000417295 FBLN1P23142 703 aa39.53■■■■□ 3.92
SH3GL1-202ENST00000417295 USP35Q9P2H5 1018 aa39.53■■■■□ 3.92
SH3GL1-202ENST00000417295 A0A0G2JS52 829 aa39.48■■■■□ 3.91
SH3GL1-202ENST00000417295 MYT1Q01538 1121 aa39.48■■■■□ 3.91
SH3GL1-202ENST00000417295 CGNL1Q0VF96 1302 aa39.45■■■■□ 3.91
SH3GL1-202ENST00000417295 MAP3K19Q56UN5 1328 aa39.44■■■■□ 3.9
SH3GL1-202ENST00000417295 CRB1P82279 1406 aa39.44■■■■□ 3.9
SH3GL1-202ENST00000417295 WDR17Q8IZU2 1322 aa39.43■■■■□ 3.9
SH3GL1-202ENST00000417295 TCP11L2Q8N4U5 519 aa39.43■■■■□ 3.9
SH3GL1-202ENST00000417295 ABCC6O95255 1503 aa39.43■■■■□ 3.9
SH3GL1-202ENST00000417295 TOM1L2Q6ZVM7 507 aa39.42■■■■□ 3.9
SH3GL1-202ENST00000417295 UPF1Q92900 1129 aaKnown RBP eCLIP39.41■■■■□ 3.96e-8■■■■■ 27.9
SH3GL1-202ENST00000417295 BARGINQ6ZT62 677 aa39.4■■■■□ 3.9
SH3GL1-202ENST00000417295 WASHC2AQ641Q2 1341 aa39.4■■■■□ 3.9
SH3GL1-202ENST00000417295 CSB-PGBD3P0DP91 1061 aa39.4■■■■□ 3.9
SH3GL1-202ENST00000417295 RRS1Q15050 365 aaKnown RBP39.4■■■■□ 3.9
SH3GL1-202ENST00000417295 KIF20BQ96Q89 1820 aa39.39■■■■□ 3.9
SH3GL1-202ENST00000417295 CCDC7Q96M83 1385 aa39.39■■■■□ 3.9
SH3GL1-202ENST00000417295 IP6K1Q92551 441 aa39.39■■■■□ 3.9
SH3GL1-202ENST00000417295 THRAP3Q9Y2W1 955 aaKnown RBP39.38■■■■□ 3.89
SH3GL1-202ENST00000417295 LTN1O94822 1766 aa39.37■■■■□ 3.89
SH3GL1-202ENST00000417295 KRT27Q7Z3Y8 459 aa39.37■■■■□ 3.89
SH3GL1-202ENST00000417295 ERBB3P21860 1342 aa39.36■■■■□ 3.89
SH3GL1-202ENST00000417295 RGPD5Q99666 1765 aa39.36■■■■□ 3.89
SH3GL1-202ENST00000417295 THSD7AQ9UPZ6 1657 aa39.35■■■■□ 3.89
SH3GL1-202ENST00000417295 AMPHP49418 695 aa39.34■■■■□ 3.89
SH3GL1-202ENST00000417295 ANKRD24Q8TF21 1146 aa39.34■■■■□ 3.89
SH3GL1-202ENST00000417295 HOXC9P31274 260 aa39.33■■■■□ 3.89
SH3GL1-202ENST00000417295 BLMP54132 1417 aaPredicted RBP39.32■■■■□ 3.89
SH3GL1-202ENST00000417295 BRWD3Q6RI45 1802 aa39.32■■■■□ 3.88
SH3GL1-202ENST00000417295 CARD10Q9BWT7 1032 aa39.31■■■■□ 3.88
SH3GL1-202ENST00000417295 EP400Q96L91 3159 aa39.3■■■■□ 3.88
SH3GL1-202ENST00000417295 KNSTRNQ9Y448 316 aa39.29■■■■□ 3.88
SH3GL1-202ENST00000417295 LTV1Q96GA3 475 aaPredicted RBP39.28■■■■□ 3.88
SH3GL1-202ENST00000417295 NLRP2Q9NX02 1062 aa39.26■■■■□ 3.88
SH3GL1-202ENST00000417295 FAM182BQ5T319 152 aa39.25■■■■□ 3.87
SH3GL1-202ENST00000417295 RTL1A6NKG5 1358 aa39.25■■■■□ 3.87
SH3GL1-202ENST00000417295 EMILIN1Q9Y6C2 1016 aa39.24■■■■□ 3.87
SH3GL1-202ENST00000417295 PER1O15534 1290 aaPredicted RBP39.23■■■■□ 3.87
SH3GL1-202ENST00000417295 TNNT2P45379 298 aaPredicted RBP39.23■■■■□ 3.87
SH3GL1-202ENST00000417295 NSD2O96028 1365 aa39.22■■■■□ 3.87
SH3GL1-202ENST00000417295 AMER1Q5JTC6 1135 aaPredicted RBP39.22■■■■□ 3.87
SH3GL1-202ENST00000417295 HSP90AB2PQ58FF8 381 aa39.2■■■■□ 3.87
SH3GL1-202ENST00000417295 FLT4P35916 1363 aa39.18■■■■□ 3.86
SH3GL1-202ENST00000417295 PDE3BQ13370 1112 aa39.17■■■■□ 3.86
SH3GL1-202ENST00000417295 POLKQ9UBT6 870 aa39.17■■■■□ 3.86
SH3GL1-202ENST00000417295 KIF24Q5T7B8 1368 aa39.17■■■■□ 3.86
SH3GL1-202ENST00000417295 PEAK1Q9H792 1746 aa39.16■■■■□ 3.86
SH3GL1-202ENST00000417295 DISP2A7MBM2 1401 aa39.16■■■■□ 3.86
SH3GL1-202ENST00000417295 PPM1GO15355 546 aaPredicted RBP39.16■■■■□ 3.86
SH3GL1-202ENST00000417295 INSRP06213 1382 aa39.15■■■■□ 3.86
SH3GL1-202ENST00000417295 MORC1Q86VD1 984 aa39.14■■■■□ 3.86
SH3GL1-202ENST00000417295 CDCA7Q9BWT1 371 aaPredicted RBP39.14■■■■□ 3.86
SH3GL1-202ENST00000417295 ANKRD26Q9UPS8 1709 aa39.13■■■■□ 3.85
SH3GL1-202ENST00000417295 DDB1Q16531 1140 aa39.13■■■■□ 3.85
SH3GL1-202ENST00000417295 PARP4Q9UKK3 1724 aaKnown RBP39.12■■■■□ 3.85
SH3GL1-202ENST00000417295 CCDC125Q86Z20 511 aa39.09■■■■□ 3.85
SH3GL1-202ENST00000417295 ZEB1P37275 1124 aaPredicted RBP39.08■■■■□ 3.85
SH3GL1-202ENST00000417295 LRRC37A3O60309 1634 aa39.07■■■■□ 3.85
SH3GL1-202ENST00000417295 IL2RBP14784 551 aa39.07■■■■□ 3.85
SH3GL1-202ENST00000417295 NBPF6Q5VWK0 638 aa39.07■■■■□ 3.85
SH3GL1-202ENST00000417295 NBPF4Q96M43 638 aa39.07■■■■□ 3.85
SH3GL1-202ENST00000417295 SMG6Q86US8 1419 aaKnown RBP39.06■■■■□ 3.84
SH3GL1-202ENST00000417295 CC2D1BQ5T0F9 858 aaKnown RBP39.06■■■■□ 3.84
SH3GL1-202ENST00000417295 FAM196AQ6ZSG2 479 aa39.06■■■■□ 3.84
SH3GL1-202ENST00000417295 WNK3Q9BYP7 1800 aa39.05■■■■□ 3.84
SH3GL1-202ENST00000417295 EXOC5O00471 708 aa39.04■■■■□ 3.84
SH3GL1-202ENST00000417295 USHBP1Q8N6Y0 703 aa39.02■■■■□ 3.84
SH3GL1-202ENST00000417295 FAM208AQ9UK61 1670 aaKnown RBP39.02■■■■□ 3.84
SH3GL1-202ENST00000417295 MARCH10Q8NA82 808 aaPredicted RBP39.01■■■■□ 3.84
SH3GL1-202ENST00000417295 MAP2P11137 1827 aaKnown RBP39■■■■□ 3.83
SH3GL1-202ENST00000417295 CNGB1Q14028 1251 aaPredicted RBP38.99■■■■□ 3.83
SH3GL1-202ENST00000417295 TNS2Q63HR2 1409 aa38.98■■■■□ 3.83
SH3GL1-202ENST00000417295 NPC1L1Q9UHC9 1359 aa38.98■■■■□ 3.83
SH3GL1-202ENST00000417295 SF3B2Q13435 895 aaKnown RBP38.97■■■■□ 3.83
SH3GL1-202ENST00000417295 TRIM37O94972 964 aa38.97■■■■□ 3.83
SH3GL1-202ENST00000417295 DEFB132Q7Z7B7 95 aa38.96■■■■□ 3.83
SH3GL1-202ENST00000417295 OVOS2A0A0G2JMS6 1433 aa38.96■■■■□ 3.83
SH3GL1-202ENST00000417295 RGPD2P0DJD1 1756 aa38.95■■■■□ 3.83
SH3GL1-202ENST00000417295 EIF4A2Q14240 407 aaKnown RBP38.93■■■■□ 3.82
SH3GL1-202ENST00000417295 MEGF6O75095 1541 aa38.91■■■■□ 3.82
SH3GL1-202ENST00000417295 EYA1Q99502 592 aa38.9■■■■□ 3.82
SH3GL1-202ENST00000417295 RAPGEF4Q8WZA2 1011 aa38.87■■■■□ 3.81
SH3GL1-202ENST00000417295 MTHFSP49914 203 aa38.86■■■■□ 3.81
SH3GL1-202ENST00000417295 BCL9O00512 1426 aa38.85■■■■□ 3.81
SH3GL1-202ENST00000417295 NCAPD2Q15021 1401 aa38.85■■■■□ 3.81
SH3GL1-202ENST00000417295 BAG6P46379 1132 aa38.83■■■■□ 3.81
SH3GL1-202ENST00000417295 ZCRB1Q8TBF4 217 aaKnown RBP38.83■■■■□ 3.81
SH3GL1-202ENST00000417295 DDX54Q8TDD1 881 aaKnown RBP38.83■■■■□ 3.81
SH3GL1-202ENST00000417295 TATP17735 454 aaPredicted RBP38.82■■■■□ 3.81
SH3GL1-202ENST00000417295 PTF1AQ7RTS3 328 aa38.81■■■■□ 3.8
SH3GL1-202ENST00000417295 RGPD1P0DJD0 1748 aa38.81■■■■□ 3.8
SH3GL1-202ENST00000417295 APBA3O96018 575 aa38.8■■■■□ 3.8
SH3GL1-202ENST00000417295 EN1Q05925 392 aaPredicted RBP38.8■■■■□ 3.8
SH3GL1-202ENST00000417295 TNS1Q9HBL0 1735 aaKnown RBP38.79■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms