RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 RIMBP3Q9UFD9 1639 aa9.02□□□□□ -0.96
NOD1-203ENST00000413433 SEMA3FQ13275 785 aa9.02□□□□□ -0.97
NOD1-203ENST00000413433 KMT5BQ4FZB7 885 aa9.02□□□□□ -0.97
NOD1-203ENST00000413433 TFIP11Q9UBB9 837 aaKnown RBP9.02□□□□□ -0.97
NOD1-203ENST00000413433 TDRD9Q8NDG6 1382 aaKnown RBP9.01□□□□□ -0.97
NOD1-203ENST00000413433 ARHGEF11O15085 1522 aa9.01□□□□□ -0.97
NOD1-203ENST00000413433 ATG7O95352 703 aa9.01□□□□□ -0.97
NOD1-203ENST00000413433 SLC10A3P09131 477 aa9.01□□□□□ -0.97
NOD1-203ENST00000413433 CDCA8Q53HL2 280 aa9.01□□□□□ -0.97
NOD1-203ENST00000413433 PNMA1Q8ND90 353 aa9.01□□□□□ -0.97
NOD1-203ENST00000413433 LRRN4Q8WUT4 740 aa9.01□□□□□ -0.97
NOD1-203ENST00000413433 STK17AQ9UEE5 414 aa9.01□□□□□ -0.97
NOD1-203ENST00000413433 RAD54L2Q9Y4B4 1467 aa9.01□□□□□ -0.97
NOD1-203ENST00000413433 WFS1O76024 890 aa9□□□□□ -0.97
NOD1-203ENST00000413433 ADH1BP00325 375 aa9□□□□□ -0.97
NOD1-203ENST00000413433 GCGRP47871 477 aa9□□□□□ -0.97
NOD1-203ENST00000413433 GUCA2AQ02747 115 aa9□□□□□ -0.97
NOD1-203ENST00000413433 ACTN4O43707 911 aaKnown RBP8.99□□□□□ -0.97
NOD1-203ENST00000413433 GPR37L1O60883 481 aa8.99□□□□□ -0.97
NOD1-203ENST00000413433 CRIPAKQ8N1N5 446 aa8.99□□□□□ -0.97
NOD1-203ENST00000413433 PRR7Q8TB68 274 aa8.99□□□□□ -0.97
NOD1-203ENST00000413433 UCN2Q96RP3 112 aa8.99□□□□□ -0.97
NOD1-203ENST00000413433 C6orf229H3BNL8 230 aa8.98□□□□□ -0.97
NOD1-203ENST00000413433 PCDHGC3Q9UN70 934 aa8.98□□□□□ -0.97
NOD1-203ENST00000413433 MAFBQ9Y5Q3 323 aaPredicted RBP8.98□□□□□ -0.97
NOD1-203ENST00000413433 ABCC8Q09428 1581 aa8.98□□□□□ -0.97
NOD1-203ENST00000413433 SOGA1O94964 1423 aa8.97□□□□□ -0.97
NOD1-203ENST00000413433 POLA1P09884 1462 aaPredicted RBP8.97□□□□□ -0.97
NOD1-203ENST00000413433 TMEM88BA6NKF7 163 aa8.97□□□□□ -0.97
NOD1-203ENST00000413433 CFHP08603 1231 aa8.97□□□□□ -0.97
NOD1-203ENST00000413433 GRIPAP1Q4V328 841 aa8.97□□□□□ -0.97
NOD1-203ENST00000413433 CHMP7Q8WUX9 453 aaPredicted RBP8.97□□□□□ -0.97
NOD1-203ENST00000413433 SLC6A16Q9GZN6 736 aa8.97□□□□□ -0.97
NOD1-203ENST00000413433 EIF4G3O43432 1585 aaKnown RBP8.97□□□□□ -0.97
NOD1-203ENST00000413433 DNMBPQ6XZF7 1577 aa8.97□□□□□ -0.97
NOD1-203ENST00000413433 IGSF3O75054 1194 aa8.96□□□□□ -0.98
NOD1-203ENST00000413433 NR1I2O75469 434 aa8.96□□□□□ -0.98
NOD1-203ENST00000413433 EIF4G2P78344 907 aaKnown RBP eCLIP8.96□□□□□ -0.98
NOD1-203ENST00000413433 CFAP99D6REC4 459 aa8.95□□□□□ -0.98
NOD1-203ENST00000413433 INSM1Q01101 510 aaPredicted RBP8.95□□□□□ -0.98
NOD1-203ENST00000413433 HLA-CQ95604 372 aa8.95□□□□□ -0.98
NOD1-203ENST00000413433 TARBP1Q13395 1621 aaKnown RBP8.94□□□□□ -0.98
NOD1-203ENST00000413433 ATP9BO43861 1147 aa8.94□□□□□ -0.98
NOD1-203ENST00000413433 FOXC1Q12948 553 aa8.94□□□□□ -0.98
NOD1-203ENST00000413433 EPS8L1Q8TE68 723 aa8.94□□□□□ -0.98
NOD1-203ENST00000413433 PKD2L1Q9P0L9 805 aa8.94□□□□□ -0.98
NOD1-203ENST00000413433 PRDM2Q13029 1718 aa8.94□□□□□ -0.98
NOD1-203ENST00000413433 C11orf95C9JLR9 678 aaPredicted RBP8.93□□□□□ -0.98
NOD1-203ENST00000413433 WIPF1O43516 503 aa8.93□□□□□ -0.98
NOD1-203ENST00000413433 AVPP01185 164 aa8.93□□□□□ -0.98
NOD1-203ENST00000413433 NR6A1Q15406 480 aa8.93□□□□□ -0.98
NOD1-203ENST00000413433 PLA2G2CQ5R387 149 aa8.93□□□□□ -0.98
NOD1-203ENST00000413433 TBC1D9Q6ZT07 1266 aa8.93□□□□□ -0.98
NOD1-203ENST00000413433 CCER1Q8TC90 406 aaPredicted RBP8.93□□□□□ -0.98
NOD1-203ENST00000413433 GNEQ9Y223 722 aaKnown RBP8.93□□□□□ -0.98
NOD1-203ENST00000413433 ARAP1Q96P48 1450 aa8.93□□□□□ -0.98
NOD1-203ENST00000413433 AXIN1O15169 862 aa8.92□□□□□ -0.98
NOD1-203ENST00000413433 CTC1Q2NKJ3 1217 aa8.92□□□□□ -0.98
NOD1-203ENST00000413433 SNAPC4Q5SXM2 1469 aa8.91□□□□□ -0.98
NOD1-203ENST00000413433 FGD5Q6ZNL6 1462 aa8.91□□□□□ -0.98
NOD1-203ENST00000413433 LOC105371045A0A1W2PR82 267 aa8.91□□□□□ -0.98
NOD1-203ENST00000413433 NFX1Q12986 1120 aaKnown RBP8.91□□□□□ -0.98
NOD1-203ENST00000413433 GMPR2Q9P2T1 348 aaKnown RBP8.91□□□□□ -0.98
NOD1-203ENST00000413433 DACH1Q9UI36 760 aa8.91□□□□□ -0.98
NOD1-203ENST00000413433 RPIAP49247 311 aa8.9□□□□□ -0.98
NOD1-203ENST00000413433 CHD1O14646 1710 aa8.9□□□□□ -0.98
NOD1-203ENST00000413433 CYP4X1Q8N118 509 aa8.89□□□□□ -0.99
NOD1-203ENST00000413433 TOR4AQ9NXH8 423 aa8.89□□□□□ -0.99
NOD1-203ENST00000413433 SMCPP49901 116 aaPredicted RBP8.88□□□□□ -0.99
NOD1-203ENST00000413433 FUT2Q10981 343 aa8.88□□□□□ -0.99
NOD1-203ENST00000413433 ELOAQ14241 798 aaKnown RBP8.88□□□□□ -0.99
NOD1-203ENST00000413433 PUS10Q3MIT2 529 aaKnown RBP8.88□□□□□ -0.99
NOD1-203ENST00000413433 CUX1P39880 1505 aa8.88□□□□□ -0.99
NOD1-203ENST00000413433 CD2BP2O95400 341 aaKnown RBP8.87□□□□□ -0.99
NOD1-203ENST00000413433 NR1H3Q13133 447 aa8.87□□□□□ -0.99
NOD1-203ENST00000413433 TMEM164Q5U3C3 297 aa8.87□□□□□ -0.99
NOD1-203ENST00000413433 SCUBE3Q8IX30 993 aa8.87□□□□□ -0.99
NOD1-203ENST00000413433 SPSB2Q99619 263 aa8.87□□□□□ -0.99
NOD1-203ENST00000413433 NOVA2Q9UNW9 492 aaKnown RBP8.87□□□□□ -0.99
NOD1-203ENST00000413433 GRIN2BQ13224 1484 aa8.85□□□□□ -0.99
NOD1-203ENST00000413433 PER1O15534 1290 aaPredicted RBP8.85□□□□□ -0.99
NOD1-203ENST00000413433 ATP6V1AP38606 617 aa8.85□□□□□ -0.99
NOD1-203ENST00000413433 STK32AQ8WU08 396 aa8.85□□□□□ -0.99
NOD1-203ENST00000413433 SYMPKQ92797 1274 aaKnown RBP8.85□□□□□ -0.99
NOD1-203ENST00000413433 USP35Q9P2H5 1018 aa8.85□□□□□ -0.99
NOD1-203ENST00000413433 ZMIZ1Q9ULJ6 1067 aa8.85□□□□□ -0.99
NOD1-203ENST00000413433 USP17L3A6NCW0 530 aa8.84□□□□□ -0.99
NOD1-203ENST00000413433 USP17L4A6NCW7 530 aa8.84□□□□□ -0.99
NOD1-203ENST00000413433 SKIP12755 728 aa8.84□□□□□ -0.99
NOD1-203ENST00000413433 KANK4Q5T7N3 995 aaPredicted RBP8.84□□□□□ -0.99
NOD1-203ENST00000413433 USP17L2Q6R6M4 530 aa8.84□□□□□ -0.99
NOD1-203ENST00000413433 USP17L1Q7RTZ2 530 aa8.84□□□□□ -0.99
NOD1-203ENST00000413433 RETREG3Q86VR2 466 aa8.84□□□□□ -0.99
NOD1-203ENST00000413433 NFATC2IPQ8NCF5 419 aa8.84□□□□□ -0.99
NOD1-203ENST00000413433 ZBBXA8MT70 800 aa8.83□□□□□ -1
NOD1-203ENST00000413433 ERCC3P19447 782 aa8.83□□□□□ -1
NOD1-203ENST00000413433 GAPVD1Q14C86 1478 aa8.83□□□□□ -1
NOD1-203ENST00000413433 MAGI1Q96QZ7 1491 aaPredicted RBP8.83□□□□□ -1
NOD1-203ENST00000413433 CLASP1Q7Z460 1538 aa8.82□□□□□ -1
NOD1-203ENST00000413433 RBM47A0AV96 593 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms