RNA–Protein interactions for RNA: ENST00000410889.1

RNU4-27P-201, Transcript of RNA, U4 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU4-27P, Length 139 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-27P-201ENST00000410889 PDE4CQ08493 712 aa9.42□□□□□ -0.9
RNU4-27P-201ENST00000410889 MAP7D1Q3KQU3 841 aa9.42□□□□□ -0.9
RNU4-27P-201ENST00000410889 USP17L2Q6R6M4 530 aa9.42□□□□□ -0.9
RNU4-27P-201ENST00000410889 USP17L1Q7RTZ2 530 aa9.42□□□□□ -0.9
RNU4-27P-201ENST00000410889 PLPP7Q8NBV4 271 aa9.42□□□□□ -0.9
RNU4-27P-201ENST00000410889 VRTNQ9H8Y1 702 aa9.42□□□□□ -0.9
RNU4-27P-201ENST00000410889 PLA2G2EQ9NZK7 142 aa9.42□□□□□ -0.9
RNU4-27P-201ENST00000410889 LZTS3O60299 673 aaPredicted RBP9.41□□□□□ -0.9
RNU4-27P-201ENST00000410889 PLEKHM2Q8IWE5 1019 aa9.41□□□□□ -0.9
RNU4-27P-201ENST00000410889 GIGYF1O75420 1035 aaPredicted RBP9.4□□□□□ -0.9
RNU4-27P-201ENST00000410889 CSB-PGBD3P0DP91 1061 aa9.4□□□□□ -0.9
RNU4-27P-201ENST00000410889 SLC19A1P41440 591 aa9.4□□□□□ -0.9
RNU4-27P-201ENST00000410889 EML3Q32P44 896 aa9.4□□□□□ -0.9
RNU4-27P-201ENST00000410889 RC3H1Q5TC82 1133 aaKnown RBP9.4□□□□□ -0.9
RNU4-27P-201ENST00000410889 LIAT1Q6ZQX7 453 aa9.4□□□□□ -0.9
RNU4-27P-201ENST00000410889 VASH1Q7L8A9 365 aaPredicted RBP9.4□□□□□ -0.9
RNU4-27P-201ENST00000410889 CCDC125Q86Z20 511 aa9.4□□□□□ -0.9
RNU4-27P-201ENST00000410889 SEPT12Q8IYM1 358 aa9.4□□□□□ -0.9
RNU4-27P-201ENST00000410889 PHTF2Q8N3S3 785 aa9.4□□□□□ -0.9
RNU4-27P-201ENST00000410889 RETREG2Q8NC44 543 aa9.4□□□□□ -0.9
RNU4-27P-201ENST00000410889 DOLKQ9UPQ8 538 aa9.4□□□□□ -0.9
RNU4-27P-201ENST00000410889 NCOA4Q13772 614 aa9.39□□□□□ -0.91
RNU4-27P-201ENST00000410889 ARID5BQ14865 1188 aa9.39□□□□□ -0.91
RNU4-27P-201ENST00000410889 CDCA8Q53HL2 280 aa9.39□□□□□ -0.91
RNU4-27P-201ENST00000410889 DEPDC4Q8N2C3 294 aa9.39□□□□□ -0.91
RNU4-27P-201ENST00000410889 KCTD15Q96SI1 283 aaPredicted RBP9.39□□□□□ -0.91
RNU4-27P-201ENST00000410889 MAP4K5Q9Y4K4 846 aa9.39□□□□□ -0.91
RNU4-27P-201ENST00000410889 TRIM52Q96A61 297 aa9.38□□□□□ -0.91
RNU4-27P-201ENST00000410889 A0A0G2JS52 829 aa9.37□□□□□ -0.91
RNU4-27P-201ENST00000410889 ATP5J2-PTCD1G3V325 749 aa9.37□□□□□ -0.91
RNU4-27P-201ENST00000410889 RAB15P59190 212 aa9.37□□□□□ -0.91
RNU4-27P-201ENST00000410889 OXLD1Q5BKU9 147 aa9.37□□□□□ -0.91
RNU4-27P-201ENST00000410889 MKRN1Q9UHC7 482 aaKnown RBP9.37□□□□□ -0.91
RNU4-27P-201ENST00000410889 ESPNB1AK53 854 aa9.36□□□□□ -0.91
RNU4-27P-201ENST00000410889 ATG7O95352 703 aa9.36□□□□□ -0.91
RNU4-27P-201ENST00000410889 SRPK2P78362 688 aaKnown RBP9.36□□□□□ -0.91
RNU4-27P-201ENST00000410889 SIRT1Q96EB6 747 aa9.36□□□□□ -0.91
RNU4-27P-201ENST00000410889 CHIC2Q9UKJ5 165 aa9.36□□□□□ -0.91
RNU4-27P-201ENST00000410889 NOD1Q9Y239 953 aa9.36□□□□□ -0.91
RNU4-27P-201ENST00000410889 PCDHB11Q9Y5F2 797 aa9.36□□□□□ -0.91
RNU4-27P-201ENST00000410889 KANK4Q5T7N3 995 aaPredicted RBP9.35□□□□□ -0.91
RNU4-27P-201ENST00000410889 LARP1Q6PKG0 1096 aaKnown RBP9.35□□□□□ -0.91
RNU4-27P-201ENST00000410889 TRAF7Q6Q0C0 670 aa9.35□□□□□ -0.91
RNU4-27P-201ENST00000410889 TRIM50Q86XT4 487 aa9.35□□□□□ -0.91
RNU4-27P-201ENST00000410889 CCDC85AQ96PX6 553 aaPredicted RBP9.35□□□□□ -0.91
RNU4-27P-201ENST00000410889 WNT7AO00755 349 aa9.34□□□□□ -0.91
RNU4-27P-201ENST00000410889 ATP1A2P50993 1020 aa9.34□□□□□ -0.91
RNU4-27P-201ENST00000410889 SPRYD7Q5W111 196 aa9.34□□□□□ -0.91
RNU4-27P-201ENST00000410889 ESF1Q9H501 851 aaKnown RBP9.34□□□□□ -0.91
RNU4-27P-201ENST00000410889 USTQ9Y2C2 406 aa9.34□□□□□ -0.91
RNU4-27P-201ENST00000410889 TLL2Q9Y6L7 1015 aa9.34□□□□□ -0.91
RNU4-27P-201ENST00000410889 FAM196BA6NMK8 535 aa9.33□□□□□ -0.92
RNU4-27P-201ENST00000410889 RASA1P20936 1047 aa9.33□□□□□ -0.92
RNU4-27P-201ENST00000410889 FSHRP23945 695 aa9.33□□□□□ -0.92
RNU4-27P-201ENST00000410889 USP4Q13107 963 aa9.33□□□□□ -0.92
RNU4-27P-201ENST00000410889 ZNF697Q5TEC3 545 aa9.33□□□□□ -0.92
RNU4-27P-201ENST00000410889 EMID1Q96A84 441 aaPredicted RBP9.33□□□□□ -0.92
RNU4-27P-201ENST00000410889 CDK15Q96Q40 435 aa9.33□□□□□ -0.92
RNU4-27P-201ENST00000410889 USP17L15C9J2P7 530 aa9.32□□□□□ -0.92
RNU4-27P-201ENST00000410889 USP17L10C9JJH3 530 aa9.32□□□□□ -0.92
RNU4-27P-201ENST00000410889 USP17L13C9JLJ4 530 aa9.32□□□□□ -0.92
RNU4-27P-201ENST00000410889 USP17L12C9JPN9 530 aa9.32□□□□□ -0.92
RNU4-27P-201ENST00000410889 USP17L11C9JVI0 530 aa9.32□□□□□ -0.92
RNU4-27P-201ENST00000410889 USP17L21D6R901 530 aa9.32□□□□□ -0.92
RNU4-27P-201ENST00000410889 USP17L18D6R9N7 530 aa9.32□□□□□ -0.92
RNU4-27P-201ENST00000410889 USP17L22D6RA61 530 aa9.32□□□□□ -0.92
RNU4-27P-201ENST00000410889 USP17L17D6RBQ6 530 aa9.32□□□□□ -0.92
RNU4-27P-201ENST00000410889 USP17L19D6RCP7 530 aa9.32□□□□□ -0.92
RNU4-27P-201ENST00000410889 USP17L20D6RJB6 530 aa9.32□□□□□ -0.92
RNU4-27P-201ENST00000410889 MYCP01106 439 aaPredicted RBP9.32□□□□□ -0.92
RNU4-27P-201ENST00000410889 DHX9Q08211 1270 aaKnown RBP9.32□□□□□ -0.92
RNU4-27P-201ENST00000410889 USP17L24Q0WX57 530 aa9.32□□□□□ -0.92
RNU4-27P-201ENST00000410889 TSGA10IPQ3SY00 556 aa9.32□□□□□ -0.92
RNU4-27P-201ENST00000410889 INTS6LQ5JSJ4 861 aaKnown RBP9.32□□□□□ -0.92
RNU4-27P-201ENST00000410889 ZNF598Q86UK7 904 aaKnown RBP9.32□□□□□ -0.92
RNU4-27P-201ENST00000410889 MPNDQ8N594 471 aa9.32□□□□□ -0.92
RNU4-27P-201ENST00000410889 MRGPRX2Q96LB1 330 aa9.32□□□□□ -0.92
RNU4-27P-201ENST00000410889 TRAIPQ9BWF2 469 aa9.32□□□□□ -0.92
RNU4-27P-201ENST00000410889 ADH1CP00326 375 aa9.31□□□□□ -0.92
RNU4-27P-201ENST00000410889 ELOAQ14241 798 aaKnown RBP9.31□□□□□ -0.92
RNU4-27P-201ENST00000410889 PRKD2Q9BZL6 878 aa9.31□□□□□ -0.92
RNU4-27P-201ENST00000410889 RBM19Q9Y4C8 960 aaKnown RBP9.31□□□□□ -0.92
RNU4-27P-201ENST00000410889 V9GY48 417 aaPredicted RBP9.31□□□□□ -0.92
RNU4-27P-201ENST00000410889 OGFOD1Q8N543 542 aa9.3□□□□□ -0.92
RNU4-27P-201ENST00000410889 NOVA2Q9UNW9 492 aaKnown RBP9.3□□□□□ -0.92
RNU4-27P-201ENST00000410889 ERVH48-1M5A8F1 160 aa9.29□□□□□ -0.92
RNU4-27P-201ENST00000410889 SIAH2O43255 324 aa9.29□□□□□ -0.92
RNU4-27P-201ENST00000410889 GTF2IP78347 998 aa9.29□□□□□ -0.92
RNU4-27P-201ENST00000410889 PSME1Q06323 249 aa9.29□□□□□ -0.92
RNU4-27P-201ENST00000410889 FOXC1Q12948 553 aa9.29□□□□□ -0.92
RNU4-27P-201ENST00000410889 NR5A1Q13285 461 aa9.29□□□□□ -0.92
RNU4-27P-201ENST00000410889 CDCA7Q9BWT1 371 aaPredicted RBP9.29□□□□□ -0.92
RNU4-27P-201ENST00000410889 DNAAF2Q9NVR5 837 aaKnown RBP9.29□□□□□ -0.92
RNU4-27P-201ENST00000410889 CRTC2Q53ET0 693 aaPredicted RBP9.28□□□□□ -0.92
RNU4-27P-201ENST00000410889 CCDC116Q8IYX3 515 aa9.28□□□□□ -0.92
RNU4-27P-201ENST00000410889 WASF2Q9Y6W5 498 aa9.28□□□□□ -0.92
RNU4-27P-201ENST00000410889 ALDH1A1P00352 501 aa9.27□□□□□ -0.93
RNU4-27P-201ENST00000410889 GRM5P41594 1212 aa9.27□□□□□ -0.93
RNU4-27P-201ENST00000410889 PTK7Q13308 1070 aa9.27□□□□□ -0.93
RNU4-27P-201ENST00000410889 LARGE2Q8N3Y3 721 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 232.9 ms