RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 CASZ1Q86V15 1759 aa9.09□□□□□ -0.95
RPA3-204ENST00000406109 PLSCR1O15162 318 aa9.09□□□□□ -0.95
RPA3-204ENST00000406109 DCAF11Q8TEB1 546 aa9.09□□□□□ -0.95
RPA3-204ENST00000406109 KDM2AQ9Y2K7 1162 aa9.09□□□□□ -0.95
RPA3-204ENST00000406109 THRAP3Q9Y2W1 955 aaKnown RBP9.09□□□□□ -0.95
RPA3-204ENST00000406109 ZBTB12Q9Y330 459 aaPredicted RBP9.09□□□□□ -0.95
RPA3-204ENST00000406109 PTGER2P43116 358 aa9.08□□□□□ -0.96
RPA3-204ENST00000406109 PPP1R1BQ9UD71 204 aaPredicted RBP9.08□□□□□ -0.96
RPA3-204ENST00000406109 CCDC61Q9Y6R9 512 aa9.08□□□□□ -0.96
RPA3-204ENST00000406109 RGPD3A6NKT7 1758 aaPredicted RBP9.08□□□□□ -0.96
RPA3-204ENST00000406109 RGPD4Q7Z3J3 1758 aa9.08□□□□□ -0.96
RPA3-204ENST00000406109 COL5A2P05997 1499 aaPredicted RBP9.08□□□□□ -0.96
RPA3-204ENST00000406109 GCP02774 474 aa9.07□□□□□ -0.96
RPA3-204ENST00000406109 ABTB2Q8N961 1025 aa9.07□□□□□ -0.96
RPA3-204ENST00000406109 ZNF784Q8NCA9 323 aaPredicted RBP9.07□□□□□ -0.96
RPA3-204ENST00000406109 AKT1S1Q96B36 256 aa9.07□□□□□ -0.96
RPA3-204ENST00000406109 ZBTB22O15209 634 aa9.06□□□□□ -0.96
RPA3-204ENST00000406109 OVOS2A0A0G2JMS6 1433 aa9.05□□□□□ -0.96
RPA3-204ENST00000406109 OVOS2A0A0J9YW53 1432 aa9.05□□□□□ -0.96
RPA3-204ENST00000406109 OVOS2Q6IE36 1432 aa9.05□□□□□ -0.96
RPA3-204ENST00000406109 COL18A1P39060 1754 aa9.05□□□□□ -0.96
RPA3-204ENST00000406109 RAB3GAP2Q9H2M9 1393 aa9.05□□□□□ -0.96
RPA3-204ENST00000406109 MARCH10Q8NA82 808 aaPredicted RBP9.05□□□□□ -0.96
RPA3-204ENST00000406109 STAC3Q96MF2 364 aa9.05□□□□□ -0.96
RPA3-204ENST00000406109 BCL11BQ9C0K0 894 aaPredicted RBP9.05□□□□□ -0.96
RPA3-204ENST00000406109 AXIN2Q9Y2T1 843 aa9.05□□□□□ -0.96
RPA3-204ENST00000406109 LRRC37A3O60309 1634 aa9.05□□□□□ -0.96
RPA3-204ENST00000406109 BCL9O00512 1426 aa9.05□□□□□ -0.96
RPA3-204ENST00000406109 CRB1P82279 1406 aa9.05□□□□□ -0.96
RPA3-204ENST00000406109 MYOM1P52179 1685 aa9.04□□□□□ -0.96
RPA3-204ENST00000406109 CHD4Q14839 1912 aa9.04□□□□□ -0.96
RPA3-204ENST00000406109 C11orf95C9JLR9 678 aaPredicted RBP9.04□□□□□ -0.96
RPA3-204ENST00000406109 ZBTB7AO95365 584 aa9.04□□□□□ -0.96
RPA3-204ENST00000406109 SGIP1Q9BQI5 828 aa9.04□□□□□ -0.96
RPA3-204ENST00000406109 AATKQ6ZMQ8 1374 aa9.03□□□□□ -0.96
RPA3-204ENST00000406109 NLRP13Q86W25 1043 aa9.03□□□□□ -0.96
RPA3-204ENST00000406109 SLIT3O75094 1523 aa9.02□□□□□ -0.97
RPA3-204ENST00000406109 TRIM26Q12899 539 aaPredicted RBP9.02□□□□□ -0.97
RPA3-204ENST00000406109 DDB1Q16531 1140 aa9.02□□□□□ -0.97
RPA3-204ENST00000406109 NBPF1Q3BBV0 1214 aa9.02□□□□□ -0.97
RPA3-204ENST00000406109 SYT17Q9BSW7 474 aa9.02□□□□□ -0.97
RPA3-204ENST00000406109 PPIP5K1Q6PFW1 1433 aa9.02□□□□□ -0.97
RPA3-204ENST00000406109 WNK3Q9BYP7 1800 aa9.01□□□□□ -0.97
RPA3-204ENST00000406109 TXNRD1Q16881 649 aa9.01□□□□□ -0.97
RPA3-204ENST00000406109 FHDC1Q9C0D6 1143 aaPredicted RBP9.01□□□□□ -0.97
RPA3-204ENST00000406109 CABP2Q9NPB3 220 aa9.01□□□□□ -0.97
RPA3-204ENST00000406109 RGPD5Q99666 1765 aa9.01□□□□□ -0.97
RPA3-204ENST00000406109 BRD4O60885 1362 aaPredicted RBP9□□□□□ -0.97
RPA3-204ENST00000406109 USP6P35125 1406 aa9□□□□□ -0.97
RPA3-204ENST00000406109 NLRP6P59044 892 aa9□□□□□ -0.97
RPA3-204ENST00000406109 SLC15A2Q16348 729 aa9□□□□□ -0.97
RPA3-204ENST00000406109 TOM1L2Q6ZVM7 507 aa9□□□□□ -0.97
RPA3-204ENST00000406109 REM2Q8IYK8 340 aaPredicted RBP9□□□□□ -0.97
RPA3-204ENST00000406109 PIK3C2AO00443 1686 aa9□□□□□ -0.97
RPA3-204ENST00000406109 WDR17Q8IZU2 1322 aa9□□□□□ -0.97
RPA3-204ENST00000406109 KIAA1210Q9ULL0 1709 aa9□□□□□ -0.97
RPA3-204ENST00000406109 AKAP12Q02952 1782 aa8.99□□□□□ -0.97
RPA3-204ENST00000406109 ARHGEF25Q86VW2 580 aa8.99□□□□□ -0.97
RPA3-204ENST00000406109 CABP1Q9NZU7 370 aa8.99□□□□□ -0.97
RPA3-204ENST00000406109 KAT6BQ8WYB5 2073 aa8.99□□□□□ -0.97
RPA3-204ENST00000406109 ZBTB7CA1YPR0 619 aa8.98□□□□□ -0.97
RPA3-204ENST00000406109 C1QTNF8P60827 252 aa8.98□□□□□ -0.97
RPA3-204ENST00000406109 SRPK2P78362 688 aaKnown RBP8.98□□□□□ -0.97
RPA3-204ENST00000406109 CDCA7Q9BWT1 371 aaPredicted RBP8.98□□□□□ -0.97
RPA3-204ENST00000406109 CARD10Q9BWT7 1032 aa8.98□□□□□ -0.97
RPA3-204ENST00000406109 MTFR1LQ9H019 292 aa8.98□□□□□ -0.97
RPA3-204ENST00000406109 CPSF1Q10570 1443 aaKnown RBP8.97□□□□□ -0.97
RPA3-204ENST00000406109 STK32BQ9NY57 414 aa8.97□□□□□ -0.97
RPA3-204ENST00000406109 PAPPAQ13219 1627 aa8.97□□□□□ -0.97
RPA3-204ENST00000406109 MAP3K5Q99683 1374 aa8.97□□□□□ -0.97
RPA3-204ENST00000406109 SENP3-EIF4A1A0A087X0R7 540 aa8.96□□□□□ -0.98
RPA3-204ENST00000406109 CENPJQ9HC77 1338 aaPredicted RBP8.96□□□□□ -0.98
RPA3-204ENST00000406109 NFAT5O94916 1531 aa8.95□□□□□ -0.98
RPA3-204ENST00000406109 TRPM1Q7Z4N2 1603 aa8.95□□□□□ -0.98
RPA3-204ENST00000406109 EXOC5O00471 708 aa8.95□□□□□ -0.98
RPA3-204ENST00000406109 ZNF827Q17R98 1081 aa8.95□□□□□ -0.98
RPA3-204ENST00000406109 ARXQ96QS3 562 aa8.95□□□□□ -0.98
RPA3-204ENST00000406109 LRRC4BQ9NT99 713 aa8.95□□□□□ -0.98
RPA3-204ENST00000406109 TTC21BQ7Z4L5 1316 aa8.95□□□□□ -0.98
RPA3-204ENST00000406109 NHSQ6T4R5 1651 aa8.94□□□□□ -0.98
RPA3-204ENST00000406109 QRICH2Q9H0J4 1663 aa8.94□□□□□ -0.98
RPA3-204ENST00000406109 PIP4P2Q8N4L2 257 aa8.94□□□□□ -0.98
RPA3-204ENST00000406109 TNS2Q63HR2 1409 aa8.94□□□□□ -0.98
RPA3-204ENST00000406109 COL24A1Q17RW2 1714 aa8.94□□□□□ -0.98
RPA3-204ENST00000406109 BTAF1O14981 1849 aa8.94□□□□□ -0.98
RPA3-204ENST00000406109 IFFO2Q5TF58 517 aa8.93□□□□□ -0.98
RPA3-204ENST00000406109 KCNH5Q8NCM2 988 aa8.93□□□□□ -0.98
RPA3-204ENST00000406109 ACSBG1Q96GR2 724 aa8.93□□□□□ -0.98
RPA3-204ENST00000406109 ABCC6O95255 1503 aa8.92□□□□□ -0.98
RPA3-204ENST00000406109 CCDC7Q96M83 1385 aa8.92□□□□□ -0.98
RPA3-204ENST00000406109 PITPNM1O00562 1244 aa8.92□□□□□ -0.98
RPA3-204ENST00000406109 SOX12O15370 315 aa8.92□□□□□ -0.98
RPA3-204ENST00000406109 ATXN8OSP0DMR3 200 aa8.92□□□□□ -0.98
RPA3-204ENST00000406109 CSB-PGBD3P0DP91 1061 aa8.92□□□□□ -0.98
RPA3-204ENST00000406109 ZNF692Q9BU19 519 aaPredicted RBP8.92□□□□□ -0.98
RPA3-204ENST00000406109 PCGF6Q9BYE7 350 aa8.92□□□□□ -0.98
RPA3-204ENST00000406109 SHANK3Q9BYB0 1731 aa8.91□□□□□ -0.98
RPA3-204ENST00000406109 ERBB3P21860 1342 aa8.9□□□□□ -0.98
RPA3-204ENST00000406109 PNPLA7Q6ZV29 1317 aa8.9□□□□□ -0.98
RPA3-204ENST00000406109 TTC21AQ8NDW8 1320 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms