RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 PRDM2Q13029 1718 aa14.54□□□□□ -0.08
CACNA1C-219ENST00000399649 DHX37Q8IY37 1157 aaKnown RBP14.54□□□□□ -0.08
CACNA1C-219ENST00000399649 ME1P48163 572 aa14.53□□□□□ -0.08
CACNA1C-219ENST00000399649 NUP133Q8WUM0 1156 aa14.53□□□□□ -0.08
CACNA1C-219ENST00000399649 BMP2KQ9NSY1 1161 aaPredicted RBP14.53□□□□□ -0.08
CACNA1C-219ENST00000399649 DNAI2Q9GZS0 605 aa14.53□□□□□ -0.08
CACNA1C-219ENST00000399649 LRRCC1Q9C099 1032 aa14.52□□□□□ -0.08
CACNA1C-219ENST00000399649 GGNBP2Q9H3C7 697 aa14.52□□□□□ -0.08
CACNA1C-219ENST00000399649 SF3B2Q13435 895 aaKnown RBP14.52□□□□□ -0.08
CACNA1C-219ENST00000399649 GCC1Q96CN9 775 aa14.52□□□□□ -0.08
CACNA1C-219ENST00000399649 ZNF76P36508 570 aa14.52□□□□□ -0.09
CACNA1C-219ENST00000399649 RBM10P98175 930 aaKnown RBP14.52□□□□□ -0.09
CACNA1C-219ENST00000399649 FAM177A1Q8N128 213 aaPredicted RBP14.52□□□□□ -0.09
CACNA1C-219ENST00000399649 USP8P40818 1118 aa14.51□□□□□ -0.09
CACNA1C-219ENST00000399649 TAF4BQ92750 862 aa14.51□□□□□ -0.09
CACNA1C-219ENST00000399649 CABP2Q9NPB3 220 aa14.51□□□□□ -0.09
CACNA1C-219ENST00000399649 CDKL5O76039 1030 aa14.51□□□□□ -0.09
CACNA1C-219ENST00000399649 POTEJP0CG39 1038 aa14.51□□□□□ -0.09
CACNA1C-219ENST00000399649 CNTLNQ9NXG0 1405 aa14.51□□□□□ -0.09
CACNA1C-219ENST00000399649 SSR1P43307 286 aaKnown RBP14.51□□□□□ -0.09
CACNA1C-219ENST00000399649 NLRP6P59044 892 aa14.51□□□□□ -0.09
CACNA1C-219ENST00000399649 SLC26A8Q96RN1 970 aa14.51□□□□□ -0.09
CACNA1C-219ENST00000399649 KIAA1328Q86T90 577 aa14.51□□□□□ -0.09
CACNA1C-219ENST00000399649 CEP57L1Q8IYX8 460 aa14.5□□□□□ -0.09
CACNA1C-219ENST00000399649 LRRFIP2Q9Y608 721 aaKnown RBP14.5□□□□□ -0.09
CACNA1C-219ENST00000399649 WDR33Q9C0J8 1336 aaKnown RBP14.5□□□□□ -0.09
CACNA1C-219ENST00000399649 SSBP05455 408 aaKnown RBP eCLIP14.5□□□□□ -0.09
CACNA1C-219ENST00000399649 ABTB2Q8N961 1025 aa14.49□□□□□ -0.09
CACNA1C-219ENST00000399649 CCDC148Q8NFR7 591 aa14.49□□□□□ -0.09
CACNA1C-219ENST00000399649 KRT85P78386 507 aa14.49□□□□□ -0.09
CACNA1C-219ENST00000399649 ZNF397Q8NF99 534 aaPredicted RBP14.49□□□□□ -0.09
CACNA1C-219ENST00000399649 TATP17735 454 aaPredicted RBP14.49□□□□□ -0.09
CACNA1C-219ENST00000399649 CABP4P57796 275 aa14.48□□□□□ -0.09
CACNA1C-219ENST00000399649 C1orf115Q9H7X2 142 aa14.48□□□□□ -0.09
CACNA1C-219ENST00000399649 SMTNL1A8MU46 457 aa14.48□□□□□ -0.09
CACNA1C-219ENST00000399649 STAMBPO95630 424 aa14.48□□□□□ -0.09
CACNA1C-219ENST00000399649 MAP4K4O95819 1239 aaPredicted RBP14.48□□□□□ -0.09
CACNA1C-219ENST00000399649 DYDC1Q8WWB3 177 aa14.48□□□□□ -0.09
CACNA1C-219ENST00000399649 CCDC102AQ96A19 550 aa14.48□□□□□ -0.09
CACNA1C-219ENST00000399649 PDZRN3Q9UPQ7 1066 aa14.47□□□□□ -0.09
CACNA1C-219ENST00000399649 STRN4Q9NRL3 753 aa14.47□□□□□ -0.09
CACNA1C-219ENST00000399649 CETN2P41208 172 aa14.47□□□□□ -0.09
CACNA1C-219ENST00000399649 MAP2K1Q02750 393 aaPredicted RBP14.47□□□□□ -0.09
CACNA1C-219ENST00000399649 EPB41L2O43491 1005 aaKnown RBP14.47□□□□□ -0.09
CACNA1C-219ENST00000399649 ANAPC15P60006 121 aa14.47□□□□□ -0.09
CACNA1C-219ENST00000399649 WASF1Q92558 559 aa14.47□□□□□ -0.09
CACNA1C-219ENST00000399649 SIL1Q9H173 461 aa14.47□□□□□ -0.09
CACNA1C-219ENST00000399649 CCT4P50991 539 aaKnown RBP14.47□□□□□ -0.09
CACNA1C-219ENST00000399649 TWISTNBQ3B726 338 aaPredicted RBP14.47□□□□□ -0.09
CACNA1C-219ENST00000399649 ZSCAN29Q8IWY8 852 aaPredicted RBP14.47□□□□□ -0.09
CACNA1C-219ENST00000399649 EIF5P55010 431 aaKnown RBP14.46□□□□□ -0.09
CACNA1C-219ENST00000399649 MPHOSPH8Q99549 860 aa14.46□□□□□ -0.09
CACNA1C-219ENST00000399649 CEP131Q9UPN4 1083 aa14.46□□□□□ -0.09
CACNA1C-219ENST00000399649 PPM1FP49593 454 aaPredicted RBP14.46□□□□□ -0.09
CACNA1C-219ENST00000399649 LARP1BQ659C4 914 aaKnown RBP14.46□□□□□ -0.09
CACNA1C-219ENST00000399649 SPATA32Q96LK8 384 aa14.46□□□□□ -0.09
CACNA1C-219ENST00000399649 UBAC1Q9BSL1 405 aa14.46□□□□□ -0.09
CACNA1C-219ENST00000399649 NOB1Q9ULX3 412 aaKnown RBP14.46□□□□□ -0.09
CACNA1C-219ENST00000399649 RRBP1Q9P2E9 1410 aaKnown RBP14.46□□□□□ -0.09
CACNA1C-219ENST00000399649 ESCO1Q5FWF5 840 aa14.46□□□□□ -0.09
CACNA1C-219ENST00000399649 TDO2P48775 406 aa14.46□□□□□ -0.1
CACNA1C-219ENST00000399649 IBSPP21815 317 aaPredicted RBP14.45□□□□□ -0.1
CACNA1C-219ENST00000399649 CFAP45Q9UL16 551 aa14.45□□□□□ -0.1
CACNA1C-219ENST00000399649 UQCRHLA0A096LP55 91 aa14.45□□□□□ -0.1
CACNA1C-219ENST00000399649 PPP1R12BO60237 982 aaPredicted RBP14.45□□□□□ -0.1
CACNA1C-219ENST00000399649 UQCRHP07919 91 aa14.45□□□□□ -0.1
CACNA1C-219ENST00000399649 K7ELQ4 463 aaPredicted RBP14.45□□□□□ -0.1
CACNA1C-219ENST00000399649 TNIP1Q15025 636 aa14.45□□□□□ -0.1
CACNA1C-219ENST00000399649 PNISRQ8TF01 805 aaKnown RBP14.45□□□□□ -0.1
CACNA1C-219ENST00000399649 STAC3Q96MF2 364 aa14.45□□□□□ -0.1
CACNA1C-219ENST00000399649 PDRG1Q9NUG6 133 aa14.44□□□□□ -0.1
CACNA1C-219ENST00000399649 FKBP4Q02790 459 aaKnown RBP eCLIP14.44□□□□□ -0.1
CACNA1C-219ENST00000399649 TAF3Q5VWG9 929 aa14.44□□□□□ -0.1
CACNA1C-219ENST00000399649 UPF3BQ9BZI7 483 aaKnown RBP14.44□□□□□ -0.1
CACNA1C-219ENST00000399649 ATAD2BQ9ULI0 1458 aa14.44□□□□□ -0.1
CACNA1C-219ENST00000399649 GIMAP7Q8NHV1 300 aa14.44□□□□□ -0.1
CACNA1C-219ENST00000399649 GOLGA6L10A0A0M3HER8 536 aa14.43□□□□□ -0.1
CACNA1C-219ENST00000399649 CTNNA3Q9UI47 895 aa14.43□□□□□ -0.1
CACNA1C-219ENST00000399649 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.43□□□□□ -0.1
CACNA1C-219ENST00000399649 USP5P45974 858 aa14.43□□□□□ -0.1
CACNA1C-219ENST00000399649 SRCIN1Q9C0H9 1055 aa14.43□□□□□ -0.1
CACNA1C-219ENST00000399649 NF2P35240 595 aa14.43□□□□□ -0.1
CACNA1C-219ENST00000399649 MTHFSP49914 203 aa14.43□□□□□ -0.1
CACNA1C-219ENST00000399649 PPP4R3AQ6IN85 833 aa14.43□□□□□ -0.1
CACNA1C-219ENST00000399649 ZSCAN31Q96LW9 406 aaPredicted RBP14.43□□□□□ -0.1
CACNA1C-219ENST00000399649 BRD4O60885 1362 aaPredicted RBP14.43□□□□□ -0.1
CACNA1C-219ENST00000399649 CCDC7Q96M83 1385 aa14.43□□□□□ -0.1
CACNA1C-219ENST00000399649 EXOSC9Q06265 439 aaKnown RBP14.43□□□□□ -0.1
CACNA1C-219ENST00000399649 NUP62CLQ9H1M0 184 aa14.43□□□□□ -0.1
CACNA1C-219ENST00000399649 SPG7Q9UQ90 795 aa14.43□□□□□ -0.1
CACNA1C-219ENST00000399649 GAPVD1Q14C86 1478 aa14.42□□□□□ -0.1
CACNA1C-219ENST00000399649 SLC4A2P04920 1241 aa14.42□□□□□ -0.1
CACNA1C-219ENST00000399649 PRKAR2BP31323 418 aa14.42□□□□□ -0.1
CACNA1C-219ENST00000399649 HDGFL1Q5TGJ6 251 aa14.42□□□□□ -0.1
CACNA1C-219ENST00000399649 SHTN1A0MZ66 631 aa14.42□□□□□ -0.1
CACNA1C-219ENST00000399649 RAI14Q9P0K7 980 aa14.42□□□□□ -0.1
CACNA1C-219ENST00000399649 BLOC1S2Q6QNY1 142 aa14.42□□□□□ -0.1
CACNA1C-219ENST00000399649 TSG101Q99816 390 aa14.42□□□□□ -0.1
CACNA1C-219ENST00000399649 SPA17Q15506 151 aa14.41□□□□□ -0.1
CACNA1C-219ENST00000399649 AACSQ86V21 672 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms