RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 LMO7Q8WWI1 1683 aa24.07■■□□□ 1.44
SMIM11A-202ENST00000399295 LARP1Q6PKG0 1096 aaKnown RBP24.06■■□□□ 1.44
SMIM11A-202ENST00000399295 FAM98CQ17RN3 349 aaKnown RBP24.05■■□□□ 1.44
SMIM11A-202ENST00000399295 COL5A2P05997 1499 aaPredicted RBP24.05■■□□□ 1.44
SMIM11A-202ENST00000399295 CGNL1Q0VF96 1302 aa24.05■■□□□ 1.44
SMIM11A-202ENST00000399295 SPATA31A1Q5TZJ5 1347 aa24.05■■□□□ 1.44
SMIM11A-202ENST00000399295 SEPT12Q8IYM1 358 aa24.04■■□□□ 1.44
SMIM11A-202ENST00000399295 USP35Q9P2H5 1018 aa24.03■■□□□ 1.44
SMIM11A-202ENST00000399295 A0A0G2JS52 829 aa24.02■■□□□ 1.44
SMIM11A-202ENST00000399295 MYT1Q01538 1121 aa24.02■■□□□ 1.44
SMIM11A-202ENST00000399295 COL18A1P39060 1754 aa24.01■■□□□ 1.43
SMIM11A-202ENST00000399295 FBLN1P23142 703 aa24.01■■□□□ 1.43
SMIM11A-202ENST00000399295 UPF1Q92900 1129 aaKnown RBP eCLIP24■■□□□ 1.43
SMIM11A-202ENST00000399295 CSB-PGBD3P0DP91 1061 aa23.99■■□□□ 1.43
SMIM11A-202ENST00000399295 TOM1L2Q6ZVM7 507 aa23.99■■□□□ 1.43
SMIM11A-202ENST00000399295 CCDC125Q86Z20 511 aa23.99■■□□□ 1.43
SMIM11A-202ENST00000399295 TCP11L2Q8N4U5 519 aa23.99■■□□□ 1.43
SMIM11A-202ENST00000399295 WASHC2AQ641Q2 1341 aa23.99■■□□□ 1.43
SMIM11A-202ENST00000399295 WDR17Q8IZU2 1322 aa23.99■■□□□ 1.43
SMIM11A-202ENST00000399295 CCDC7Q96M83 1385 aa23.99■■□□□ 1.43
SMIM11A-202ENST00000399295 MAP3K19Q56UN5 1328 aa23.98■■□□□ 1.43
SMIM11A-202ENST00000399295 CRB1P82279 1406 aa23.98■■□□□ 1.43
SMIM11A-202ENST00000399295 ABCC6O95255 1503 aa23.98■■□□□ 1.43
SMIM11A-202ENST00000399295 BARGINQ6ZT62 677 aa23.97■■□□□ 1.43
SMIM11A-202ENST00000399295 IP6K1Q92551 441 aa23.97■■□□□ 1.43
SMIM11A-202ENST00000399295 THRAP3Q9Y2W1 955 aaKnown RBP23.97■■□□□ 1.43
SMIM11A-202ENST00000399295 KIF20BQ96Q89 1820 aa23.96■■□□□ 1.43
SMIM11A-202ENST00000399295 AMPHP49418 695 aa23.96■■□□□ 1.43
SMIM11A-202ENST00000399295 RRS1Q15050 365 aaKnown RBP23.96■■□□□ 1.43
SMIM11A-202ENST00000399295 KNSTRNQ9Y448 316 aa23.96■■□□□ 1.43
SMIM11A-202ENST00000399295 KRT27Q7Z3Y8 459 aa23.94■■□□□ 1.42
SMIM11A-202ENST00000399295 LTN1O94822 1766 aa23.93■■□□□ 1.42
SMIM11A-202ENST00000399295 ERBB3P21860 1342 aa23.93■■□□□ 1.42
SMIM11A-202ENST00000399295 ANKRD24Q8TF21 1146 aa23.93■■□□□ 1.42
SMIM11A-202ENST00000399295 CARD10Q9BWT7 1032 aa23.93■■□□□ 1.42
SMIM11A-202ENST00000399295 BLMP54132 1417 aaPredicted RBP23.93■■□□□ 1.42
SMIM11A-202ENST00000399295 HOXC9P31274 260 aa23.92■■□□□ 1.42
SMIM11A-202ENST00000399295 RGPD5Q99666 1765 aa23.91■■□□□ 1.42
SMIM11A-202ENST00000399295 LTV1Q96GA3 475 aaPredicted RBP23.9■■□□□ 1.42
SMIM11A-202ENST00000399295 NLRP2Q9NX02 1062 aa23.9■■□□□ 1.42
SMIM11A-202ENST00000399295 NSD2O96028 1365 aa23.9■■□□□ 1.42
SMIM11A-202ENST00000399295 RTL1A6NKG5 1358 aa23.89■■□□□ 1.41
SMIM11A-202ENST00000399295 THSD7AQ9UPZ6 1657 aa23.89■■□□□ 1.41
SMIM11A-202ENST00000399295 BRWD3Q6RI45 1802 aa23.88■■□□□ 1.41
SMIM11A-202ENST00000399295 PER1O15534 1290 aaPredicted RBP23.87■■□□□ 1.41
SMIM11A-202ENST00000399295 TNNT2P45379 298 aaPredicted RBP23.87■■□□□ 1.41
SMIM11A-202ENST00000399295 AMER1Q5JTC6 1135 aaPredicted RBP23.86■■□□□ 1.41
SMIM11A-202ENST00000399295 MORC1Q86VD1 984 aa23.86■■□□□ 1.41
SMIM11A-202ENST00000399295 CDCA7Q9BWT1 371 aaPredicted RBP23.86■■□□□ 1.41
SMIM11A-202ENST00000399295 EMILIN1Q9Y6C2 1016 aa23.86■■□□□ 1.41
SMIM11A-202ENST00000399295 KIF24Q5T7B8 1368 aa23.86■■□□□ 1.41
SMIM11A-202ENST00000399295 PPM1GO15355 546 aaPredicted RBP23.85■■□□□ 1.41
SMIM11A-202ENST00000399295 PDE3BQ13370 1112 aa23.85■■□□□ 1.41
SMIM11A-202ENST00000399295 FLT4P35916 1363 aa23.84■■□□□ 1.41
SMIM11A-202ENST00000399295 HSP90AB2PQ58FF8 381 aa23.84■■□□□ 1.41
SMIM11A-202ENST00000399295 POLKQ9UBT6 870 aa23.83■■□□□ 1.41
SMIM11A-202ENST00000399295 INSRP06213 1382 aa23.82■■□□□ 1.4
SMIM11A-202ENST00000399295 FAM182BQ5T319 152 aa23.82■■□□□ 1.4
SMIM11A-202ENST00000399295 DIEXFQ68CQ4 756 aaKnown RBP23.82■■□□□ 1.4
SMIM11A-202ENST00000399295 EP400Q96L91 3159 aa23.81■■□□□ 1.4
SMIM11A-202ENST00000399295 DDB1Q16531 1140 aa23.81■■□□□ 1.4
SMIM11A-202ENST00000399295 ANKRD26Q9UPS8 1709 aa23.8■■□□□ 1.4
SMIM11A-202ENST00000399295 SMG6Q86US8 1419 aaKnown RBP23.79■■□□□ 1.4
SMIM11A-202ENST00000399295 SF3B2Q13435 895 aaKnown RBP23.79■■□□□ 1.4
SMIM11A-202ENST00000399295 CC2D1BQ5T0F9 858 aaKnown RBP23.79■■□□□ 1.4
SMIM11A-202ENST00000399295 PEAK1Q9H792 1746 aa23.79■■□□□ 1.4
SMIM11A-202ENST00000399295 DISP2A7MBM2 1401 aa23.78■■□□□ 1.4
SMIM11A-202ENST00000399295 IL2RBP14784 551 aa23.78■■□□□ 1.4
SMIM11A-202ENST00000399295 FAM196AQ6ZSG2 479 aa23.78■■□□□ 1.4
SMIM11A-202ENST00000399295 EXOC5O00471 708 aa23.77■■□□□ 1.4
SMIM11A-202ENST00000399295 PARP4Q9UKK3 1724 aaKnown RBP23.76■■□□□ 1.39
SMIM11A-202ENST00000399295 NBPF6Q5VWK0 638 aa23.76■■□□□ 1.39
SMIM11A-202ENST00000399295 NBPF4Q96M43 638 aa23.76■■□□□ 1.39
SMIM11A-202ENST00000399295 NPC1L1Q9UHC9 1359 aa23.75■■□□□ 1.39
SMIM11A-202ENST00000399295 CNGB1Q14028 1251 aaPredicted RBP23.74■■□□□ 1.39
SMIM11A-202ENST00000399295 FAM208AQ9UK61 1670 aaKnown RBP23.73■■□□□ 1.39
SMIM11A-202ENST00000399295 MAP2P11137 1827 aaKnown RBP23.73■■□□□ 1.39
SMIM11A-202ENST00000399295 USHBP1Q8N6Y0 703 aa23.72■■□□□ 1.39
SMIM11A-202ENST00000399295 LRRC37A3O60309 1634 aa23.72■■□□□ 1.39
SMIM11A-202ENST00000399295 WNK3Q9BYP7 1800 aa23.7■■□□□ 1.39
SMIM11A-202ENST00000399295 MARCH10Q8NA82 808 aaPredicted RBP23.7■■□□□ 1.38
SMIM11A-202ENST00000399295 EIF4A2Q14240 407 aaKnown RBP23.69■■□□□ 1.38
SMIM11A-202ENST00000399295 OVOS2A0A0G2JMS6 1433 aa23.68■■□□□ 1.38
SMIM11A-202ENST00000399295 TNS2Q63HR2 1409 aa23.68■■□□□ 1.38
SMIM11A-202ENST00000399295 TRIM37O94972 964 aa23.68■■□□□ 1.38
SMIM11A-202ENST00000399295 BAG6P46379 1132 aa23.68■■□□□ 1.38
SMIM11A-202ENST00000399295 RAPGEF4Q8WZA2 1011 aa23.68■■□□□ 1.38
SMIM11A-202ENST00000399295 RGPD2P0DJD1 1756 aa23.67■■□□□ 1.38
SMIM11A-202ENST00000399295 MTHFSP49914 203 aa23.66■■□□□ 1.38
SMIM11A-202ENST00000399295 EYA1Q99502 592 aa23.66■■□□□ 1.38
SMIM11A-202ENST00000399295 RGPD1P0DJD0 1748 aa23.66■■□□□ 1.38
SMIM11A-202ENST00000399295 BCL9O00512 1426 aa23.65■■□□□ 1.38
SMIM11A-202ENST00000399295 TATP17735 454 aaPredicted RBP23.64■■□□□ 1.37
SMIM11A-202ENST00000399295 DEFB132Q7Z7B7 95 aa23.64■■□□□ 1.37
SMIM11A-202ENST00000399295 MEGF6O75095 1541 aa23.64■■□□□ 1.37
SMIM11A-202ENST00000399295 ZCRB1Q8TBF4 217 aaKnown RBP23.63■■□□□ 1.37
SMIM11A-202ENST00000399295 DDX54Q8TDD1 881 aaKnown RBP23.63■■□□□ 1.37
SMIM11A-202ENST00000399295 DDX10Q13206 875 aaKnown RBP23.62■■□□□ 1.37
SMIM11A-202ENST00000399295 NCAPD2Q15021 1401 aa23.6■■□□□ 1.37
SMIM11A-202ENST00000399295 APBA3O96018 575 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms