RNA–Protein interactions for RNA: ENST00000399287.7

HPS5-204, Transcript of HPS5, biogenesis of lysosomal organelles complex 2 subunit 2, humanhuman

TSL 1 (best)

Gene HPS5, Length 711 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5-204ENST00000399287 SLIT3O75094 1523 aa16.32■□□□□ 0.2
HPS5-204ENST00000399287 PARD3Q8TEW0 1356 aa16.32■□□□□ 0.2
HPS5-204ENST00000399287 SRPK2P78362 688 aaKnown RBP16.31■□□□□ 0.2
HPS5-204ENST00000399287 SPINK5Q9NQ38 1064 aaPredicted RBP16.31■□□□□ 0.2
HPS5-204ENST00000399287 CENPJQ9HC77 1338 aaPredicted RBP16.3■□□□□ 0.2
HPS5-204ENST00000399287 PTF1AQ7RTS3 328 aa16.3■□□□□ 0.2
HPS5-204ENST00000399287 USP6P35125 1406 aa16.29■□□□□ 0.2
HPS5-204ENST00000399287 CRB1P82279 1406 aa16.29■□□□□ 0.2
HPS5-204ENST00000399287 ZBTB7CA1YPR0 619 aa16.29■□□□□ 0.2
HPS5-204ENST00000399287 NLRP13Q86W25 1043 aa16.29■□□□□ 0.2
HPS5-204ENST00000399287 ZNF219Q9P2Y4 722 aaPredicted RBP16.29■□□□□ 0.2
HPS5-204ENST00000399287 RGPD3A6NKT7 1758 aaPredicted RBP16.28■□□□□ 0.2
HPS5-204ENST00000399287 RGPD4Q7Z3J3 1758 aa16.28■□□□□ 0.2
HPS5-204ENST00000399287 CABP1Q9NZU7 370 aa16.28■□□□□ 0.2
HPS5-204ENST00000399287 AKAP12Q02952 1782 aa16.28■□□□□ 0.2
HPS5-204ENST00000399287 THRAP3Q9Y2W1 955 aaKnown RBP16.27■□□□□ 0.2
HPS5-204ENST00000399287 CASZ1Q86V15 1759 aa16.27■□□□□ 0.2
HPS5-204ENST00000399287 TRPM1Q7Z4N2 1603 aa16.27■□□□□ 0.19
HPS5-204ENST00000399287 C1QBPQ07021 282 aaKnown RBP16.26■□□□□ 0.19
HPS5-204ENST00000399287 AXIN2Q9Y2T1 843 aa16.26■□□□□ 0.19
HPS5-204ENST00000399287 AATKQ6ZMQ8 1374 aa16.26■□□□□ 0.19
HPS5-204ENST00000399287 NLRP6P59044 892 aa16.25■□□□□ 0.19
HPS5-204ENST00000399287 ANO8Q9HCE9 1232 aaPredicted RBP16.25■□□□□ 0.19
HPS5-204ENST00000399287 OVOS2A0A0G2JMS6 1433 aa16.25■□□□□ 0.19
HPS5-204ENST00000399287 OVOS2A0A0J9YW53 1432 aa16.25■□□□□ 0.19
HPS5-204ENST00000399287 OVOS2Q6IE36 1432 aa16.25■□□□□ 0.19
HPS5-204ENST00000399287 PDGFDQ9GZP0 370 aaPredicted RBP16.23■□□□□ 0.19
HPS5-204ENST00000399287 BRD4O60885 1362 aaPredicted RBP16.23■□□□□ 0.19
HPS5-204ENST00000399287 NBPF14Q5TI25 921 aa16.22■□□□□ 0.19
HPS5-204ENST00000399287 CPSF1Q10570 1443 aaKnown RBP16.21■□□□□ 0.19
HPS5-204ENST00000399287 TOM1L2Q6ZVM7 507 aa16.21■□□□□ 0.19
HPS5-204ENST00000399287 PROM2Q8N271 834 aa16.21■□□□□ 0.19
HPS5-204ENST00000399287 MARCH10Q8NA82 808 aaPredicted RBP16.21■□□□□ 0.19
HPS5-204ENST00000399287 NFAT5O94916 1531 aa16.2■□□□□ 0.18
HPS5-204ENST00000399287 KCNQ2O43526 872 aa16.2■□□□□ 0.18
HPS5-204ENST00000399287 CAPN15O75808 1086 aa16.2■□□□□ 0.18
HPS5-204ENST00000399287 DDB1Q16531 1140 aa16.2■□□□□ 0.18
HPS5-204ENST00000399287 WDR17Q8IZU2 1322 aa16.19■□□□□ 0.18
HPS5-204ENST00000399287 MYOM1P52179 1685 aa16.19■□□□□ 0.18
HPS5-204ENST00000399287 SOX12O15370 315 aa16.19■□□□□ 0.18
HPS5-204ENST00000399287 MON2Q7Z3U7 1717 aa16.19■□□□□ 0.18
HPS5-204ENST00000399287 TTC21BQ7Z4L5 1316 aa16.19■□□□□ 0.18
HPS5-204ENST00000399287 PLSCR1O15162 318 aa16.18■□□□□ 0.18
HPS5-204ENST00000399287 ARHGEF25Q86VW2 580 aa16.18■□□□□ 0.18
HPS5-204ENST00000399287 SPON1Q9HCB6 807 aa16.18■□□□□ 0.18
HPS5-204ENST00000399287 YY1P25490 414 aa16.16■□□□□ 0.18
HPS5-204ENST00000399287 BCL11BQ9C0K0 894 aaPredicted RBP16.16■□□□□ 0.18
HPS5-204ENST00000399287 EVC2Q86UK5 1308 aa16.16■□□□□ 0.18
HPS5-204ENST00000399287 LTN1O94822 1766 aa16.15■□□□□ 0.18
HPS5-204ENST00000399287 TONSLQ96HA7 1378 aa16.15■□□□□ 0.18
HPS5-204ENST00000399287 BCL9O00512 1426 aa16.15■□□□□ 0.18
HPS5-204ENST00000399287 PPP1R1BQ9UD71 204 aaPredicted RBP16.15■□□□□ 0.18
HPS5-204ENST00000399287 NHSQ6T4R5 1651 aa16.14■□□□□ 0.18
HPS5-204ENST00000399287 USP54Q70EL1 1684 aa16.14■□□□□ 0.18
HPS5-204ENST00000399287 NINLQ9Y2I6 1382 aa16.14■□□□□ 0.17
HPS5-204ENST00000399287 C11orf95C9JLR9 678 aaPredicted RBP16.13■□□□□ 0.17
HPS5-204ENST00000399287 ZBTB7AO95365 584 aa16.13■□□□□ 0.17
HPS5-204ENST00000399287 CD163L1Q9NR16 1453 aa16.13■□□□□ 0.17
HPS5-204ENST00000399287 ROCK2O75116 1388 aaKnown RBP16.13■□□□□ 0.17
HPS5-204ENST00000399287 CARD10Q9BWT7 1032 aa16.12■□□□□ 0.17
HPS5-204ENST00000399287 CSB-PGBD3P0DP91 1061 aa16.11■□□□□ 0.17
HPS5-204ENST00000399287 PTGER2P43116 358 aa16.11■□□□□ 0.17
HPS5-204ENST00000399287 TXNRD1Q16881 649 aa16.11■□□□□ 0.17
HPS5-204ENST00000399287 PAPPAQ13219 1627 aa16.11■□□□□ 0.17
HPS5-204ENST00000399287 KTN1Q86UP2 1357 aaKnown RBP16.11■□□□□ 0.17
HPS5-204ENST00000399287 TNS2Q63HR2 1409 aa16.11■□□□□ 0.17
HPS5-204ENST00000399287 BTAF1O14981 1849 aa16.1■□□□□ 0.17
HPS5-204ENST00000399287 FKBP8Q14318 412 aa16.1■□□□□ 0.17
HPS5-204ENST00000399287 KCNH5Q8NCM2 988 aa16.1■□□□□ 0.17
HPS5-204ENST00000399287 ZNF692Q9BU19 519 aaPredicted RBP16.1■□□□□ 0.17
HPS5-204ENST00000399287 TTC21AQ8NDW8 1320 aa16.1■□□□□ 0.17
HPS5-204ENST00000399287 ABCC6O95255 1503 aa16.09■□□□□ 0.17
HPS5-204ENST00000399287 CDCA7Q9BWT1 371 aaPredicted RBP16.09■□□□□ 0.17
HPS5-204ENST00000399287 NME9Q86XW9 330 aa16.08■□□□□ 0.16
HPS5-204ENST00000399287 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.08■□□□□ 0.16
HPS5-204ENST00000399287 CCDC7Q96M83 1385 aa16.08■□□□□ 0.16
HPS5-204ENST00000399287 SBNO2Q9Y2G9 1366 aa16.08■□□□□ 0.16
HPS5-204ENST00000399287 EXOC5O00471 708 aa16.07■□□□□ 0.16
HPS5-204ENST00000399287 SLC15A2Q16348 729 aa16.07■□□□□ 0.16
HPS5-204ENST00000399287 ACSBG1Q96GR2 724 aa16.07■□□□□ 0.16
HPS5-204ENST00000399287 CARD11Q9BXL7 1154 aa16.07■□□□□ 0.16
HPS5-204ENST00000399287 USP31Q70CQ4 1352 aa16.07■□□□□ 0.16
HPS5-204ENST00000399287 KAT6BQ8WYB5 2073 aa16.07■□□□□ 0.16
HPS5-204ENST00000399287 ERBB3P21860 1342 aa16.06■□□□□ 0.16
HPS5-204ENST00000399287 CCER1Q8TC90 406 aaPredicted RBP16.05■□□□□ 0.16
HPS5-204ENST00000399287 SGIP1Q9BQI5 828 aa16.05■□□□□ 0.16
HPS5-204ENST00000399287 STK32BQ9NY57 414 aa16.04■□□□□ 0.16
HPS5-204ENST00000399287 RGPD2P0DJD1 1756 aa16.04■□□□□ 0.16
HPS5-204ENST00000399287 TUBGCP6Q96RT7 1819 aa16.03■□□□□ 0.16
HPS5-204ENST00000399287 POLA2Q14181 598 aa16.03■□□□□ 0.16
HPS5-204ENST00000399287 FHDC1Q9C0D6 1143 aaPredicted RBP16.03■□□□□ 0.16
HPS5-204ENST00000399287 NLRP2Q9NX02 1062 aa16.03■□□□□ 0.16
HPS5-204ENST00000399287 UTRNP46939 3433 aa16.02■□□□□ 0.16
HPS5-204ENST00000399287 ZNF827Q17R98 1081 aa16.02■□□□□ 0.16
HPS5-204ENST00000399287 SYT17Q9BSW7 474 aa16.02■□□□□ 0.16
HPS5-204ENST00000399287 SLC12A5Q9H2X9 1139 aa16.02■□□□□ 0.16
HPS5-204ENST00000399287 SHANK3Q9BYB0 1731 aa16.02■□□□□ 0.15
HPS5-204ENST00000399287 CHD4Q14839 1912 aa16.02■□□□□ 0.15
HPS5-204ENST00000399287 LRRC4BQ9NT99 713 aa16.01■□□□□ 0.15
HPS5-204ENST00000399287 A0A1W2PP64 1363 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms