RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 USP35Q9P2H5 1018 aa25.91■■□□□ 1.74
COLCA2-201ENST00000398035 TOM1L2Q6ZVM7 507 aa25.9■■□□□ 1.74
COLCA2-201ENST00000398035 PANK3Q9H999 370 aa25.9■■□□□ 1.74
COLCA2-201ENST00000398035 GLI3P10071 1580 aa25.89■■□□□ 1.74
COLCA2-201ENST00000398035 UPF1Q92900 1129 aaKnown RBP eCLIP25.89■■□□□ 1.74
COLCA2-201ENST00000398035 WDR17Q8IZU2 1322 aa25.89■■□□□ 1.74
COLCA2-201ENST00000398035 COL5A2P05997 1499 aaPredicted RBP25.89■■□□□ 1.73
COLCA2-201ENST00000398035 CSB-PGBD3P0DP91 1061 aa25.88■■□□□ 1.73
COLCA2-201ENST00000398035 KRT27Q7Z3Y8 459 aa25.88■■□□□ 1.73
COLCA2-201ENST00000398035 NSD3Q9BZ95 1437 aa25.88■■□□□ 1.73
COLCA2-201ENST00000398035 IP6K1Q92551 441 aa25.88■■□□□ 1.73
COLCA2-201ENST00000398035 NFAT5O94916 1531 aa25.88■■□□□ 1.73
COLCA2-201ENST00000398035 CRB1P82279 1406 aa25.87■■□□□ 1.73
COLCA2-201ENST00000398035 KIF7Q2M1P5 1343 aa25.86■■□□□ 1.73
COLCA2-201ENST00000398035 CCDC125Q86Z20 511 aa25.86■■□□□ 1.73
COLCA2-201ENST00000398035 NRAPQ86VF7 1730 aa25.85■■□□□ 1.73
COLCA2-201ENST00000398035 AMPHP49418 695 aa25.85■■□□□ 1.73
COLCA2-201ENST00000398035 CDCA7Q9BWT1 371 aaPredicted RBP25.85■■□□□ 1.73
COLCA2-201ENST00000398035 CARD10Q9BWT7 1032 aa25.85■■□□□ 1.73
COLCA2-201ENST00000398035 LMO7Q8WWI1 1683 aa25.85■■□□□ 1.73
COLCA2-201ENST00000398035 KNSTRNQ9Y448 316 aa25.84■■□□□ 1.73
COLCA2-201ENST00000398035 ABCC6O95255 1503 aa25.84■■□□□ 1.73
COLCA2-201ENST00000398035 USP54Q70EL1 1684 aa25.83■■□□□ 1.72
COLCA2-201ENST00000398035 MAP3K19Q56UN5 1328 aa25.82■■□□□ 1.72
COLCA2-201ENST00000398035 ERBB3P21860 1342 aa25.81■■□□□ 1.72
COLCA2-201ENST00000398035 PDE3BQ13370 1112 aa25.8■■□□□ 1.72
COLCA2-201ENST00000398035 ANKRD24Q8TF21 1146 aa25.8■■□□□ 1.72
COLCA2-201ENST00000398035 BLMP54132 1417 aaPredicted RBP25.8■■□□□ 1.72
COLCA2-201ENST00000398035 HOXC9P31274 260 aa25.79■■□□□ 1.72
COLCA2-201ENST00000398035 KIF24Q5T7B8 1368 aa25.78■■□□□ 1.72
COLCA2-201ENST00000398035 CCDC7Q96M83 1385 aa25.78■■□□□ 1.72
COLCA2-201ENST00000398035 FBLN1P23142 703 aa25.78■■□□□ 1.72
COLCA2-201ENST00000398035 NLRP2Q9NX02 1062 aa25.78■■□□□ 1.72
COLCA2-201ENST00000398035 RRS1Q15050 365 aaKnown RBP25.77■■□□□ 1.72
COLCA2-201ENST00000398035 MYOM1P52179 1685 aa25.76■■□□□ 1.72
COLCA2-201ENST00000398035 RTL1A6NKG5 1358 aa25.76■■□□□ 1.71
COLCA2-201ENST00000398035 NSD2O96028 1365 aa25.76■■□□□ 1.71
COLCA2-201ENST00000398035 COL18A1P39060 1754 aa25.75■■□□□ 1.71
COLCA2-201ENST00000398035 ZEB1P37275 1124 aaPredicted RBP25.74■■□□□ 1.71
COLCA2-201ENST00000398035 FAM196AQ6ZSG2 479 aa25.74■■□□□ 1.71
COLCA2-201ENST00000398035 WASHC2AQ641Q2 1341 aa25.73■■□□□ 1.71
COLCA2-201ENST00000398035 SF3B2Q13435 895 aaKnown RBP25.73■■□□□ 1.71
COLCA2-201ENST00000398035 DDB1Q16531 1140 aa25.73■■□□□ 1.71
COLCA2-201ENST00000398035 EXOC5O00471 708 aa25.71■■□□□ 1.71
COLCA2-201ENST00000398035 MORC1Q86VD1 984 aa25.71■■□□□ 1.71
COLCA2-201ENST00000398035 LTV1Q96GA3 475 aaPredicted RBP25.71■■□□□ 1.71
COLCA2-201ENST00000398035 FLT4P35916 1363 aa25.69■■□□□ 1.7
COLCA2-201ENST00000398035 PER1O15534 1290 aaPredicted RBP25.69■■□□□ 1.7
COLCA2-201ENST00000398035 INSRP06213 1382 aa25.69■■□□□ 1.7
COLCA2-201ENST00000398035 PPM1GO15355 546 aaPredicted RBP25.68■■□□□ 1.7
COLCA2-201ENST00000398035 IL2RBP14784 551 aa25.68■■□□□ 1.7
COLCA2-201ENST00000398035 HSP90AB2PQ58FF8 381 aa25.67■■□□□ 1.7
COLCA2-201ENST00000398035 POLKQ9UBT6 870 aa25.67■■□□□ 1.7
COLCA2-201ENST00000398035 EMILIN1Q9Y6C2 1016 aa25.67■■□□□ 1.7
COLCA2-201ENST00000398035 THSD7AQ9UPZ6 1657 aa25.67■■□□□ 1.7
COLCA2-201ENST00000398035 SMG6Q86US8 1419 aaKnown RBP25.67■■□□□ 1.7
COLCA2-201ENST00000398035 AMER1Q5JTC6 1135 aaPredicted RBP25.66■■□□□ 1.7
COLCA2-201ENST00000398035 TNNT2P45379 298 aaPredicted RBP25.65■■□□□ 1.7
COLCA2-201ENST00000398035 FAM182BQ5T319 152 aa25.64■■□□□ 1.7
COLCA2-201ENST00000398035 DISP2A7MBM2 1401 aa25.61■■□□□ 1.69
COLCA2-201ENST00000398035 NBPF6Q5VWK0 638 aa25.61■■□□□ 1.69
COLCA2-201ENST00000398035 NBPF4Q96M43 638 aa25.61■■□□□ 1.69
COLCA2-201ENST00000398035 KIF20BQ96Q89 1820 aa25.6■■□□□ 1.69
COLCA2-201ENST00000398035 NPC1L1Q9UHC9 1359 aa25.6■■□□□ 1.69
COLCA2-201ENST00000398035 LTN1O94822 1766 aa25.59■■□□□ 1.69
COLCA2-201ENST00000398035 BAG6P46379 1132 aa25.59■■□□□ 1.69
COLCA2-201ENST00000398035 MARCH10Q8NA82 808 aaPredicted RBP25.57■■□□□ 1.68
COLCA2-201ENST00000398035 TRIM37O94972 964 aa25.56■■□□□ 1.68
COLCA2-201ENST00000398035 RAPGEF4Q8WZA2 1011 aa25.56■■□□□ 1.68
COLCA2-201ENST00000398035 OVOS2A0A0G2JMS6 1433 aa25.56■■□□□ 1.68
COLCA2-201ENST00000398035 BRWD3Q6RI45 1802 aa25.55■■□□□ 1.68
COLCA2-201ENST00000398035 CC2D1BQ5T0F9 858 aaKnown RBP25.54■■□□□ 1.68
COLCA2-201ENST00000398035 BCL9O00512 1426 aa25.54■■□□□ 1.68
COLCA2-201ENST00000398035 RGPD5Q99666 1765 aa25.53■■□□□ 1.68
COLCA2-201ENST00000398035 PARP4Q9UKK3 1724 aaKnown RBP25.53■■□□□ 1.68
COLCA2-201ENST00000398035 TATP17735 454 aaPredicted RBP25.53■■□□□ 1.68
COLCA2-201ENST00000398035 ZCRB1Q8TBF4 217 aaKnown RBP25.53■■□□□ 1.68
COLCA2-201ENST00000398035 TNS2Q63HR2 1409 aa25.51■■□□□ 1.67
COLCA2-201ENST00000398035 APBA3O96018 575 aa25.51■■□□□ 1.67
COLCA2-201ENST00000398035 DEFB132Q7Z7B7 95 aa25.51■■□□□ 1.67
COLCA2-201ENST00000398035 BCL11BQ9C0K0 894 aaPredicted RBP25.51■■□□□ 1.67
COLCA2-201ENST00000398035 EIF4A2Q14240 407 aaKnown RBP25.5■■□□□ 1.67
COLCA2-201ENST00000398035 USHBP1Q8N6Y0 703 aa25.49■■□□□ 1.67
COLCA2-201ENST00000398035 EYA1Q99502 592 aa25.49■■□□□ 1.67
COLCA2-201ENST00000398035 DDX54Q8TDD1 881 aaKnown RBP25.48■■□□□ 1.67
COLCA2-201ENST00000398035 MTHFSP49914 203 aa25.47■■□□□ 1.67
COLCA2-201ENST00000398035 FAM208AQ9UK61 1670 aaKnown RBP25.47■■□□□ 1.67
COLCA2-201ENST00000398035 EP400Q96L91 3159 aa25.46■■□□□ 1.67
COLCA2-201ENST00000398035 EN1Q05925 392 aaPredicted RBP25.46■■□□□ 1.67
COLCA2-201ENST00000398035 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.45■■□□□ 1.66
COLCA2-201ENST00000398035 LRRC37A3O60309 1634 aa25.44■■□□□ 1.66
COLCA2-201ENST00000398035 PEAK1Q9H792 1746 aa25.44■■□□□ 1.66
COLCA2-201ENST00000398035 ANKRD26Q9UPS8 1709 aa25.43■■□□□ 1.66
COLCA2-201ENST00000398035 PARD3Q8TEW0 1356 aa25.43■■□□□ 1.66
COLCA2-201ENST00000398035 PLSCR1O15162 318 aa25.43■■□□□ 1.66
COLCA2-201ENST00000398035 CAMKK2Q96RR4 588 aa25.43■■□□□ 1.66
COLCA2-201ENST00000398035 SPG7Q9UQ90 795 aa25.43■■□□□ 1.66
COLCA2-201ENST00000398035 CNGB1Q14028 1251 aaPredicted RBP25.41■■□□□ 1.66
COLCA2-201ENST00000398035 IGSF1Q8N6C5 1336 aa25.41■■□□□ 1.66
COLCA2-201ENST00000398035 PCDH11XQ9BZA7 1347 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms