RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 KIF20BQ96Q89 1820 aa18.35■□□□□ 0.53
PTN-202ENST00000393083 NWD2Q9ULI1 1742 aa18.35■□□□□ 0.53
PTN-202ENST00000393083 CENPBP07199 599 aaPredicted RBP18.34■□□□□ 0.53
PTN-202ENST00000393083 AMER1Q5JTC6 1135 aaPredicted RBP18.34■□□□□ 0.53
PTN-202ENST00000393083 ATRNO75882 1429 aa18.34■□□□□ 0.53
PTN-202ENST00000393083 ANKRD26Q9UPS8 1709 aa18.34■□□□□ 0.53
PTN-202ENST00000393083 AATKQ6ZMQ8 1374 aa18.34■□□□□ 0.53
PTN-202ENST00000393083 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.33■□□□□ 0.53
PTN-202ENST00000393083 LMO7Q8WWI1 1683 aa18.33■□□□□ 0.53
PTN-202ENST00000393083 TRPC5Q9UL62 973 aaPredicted RBP18.33■□□□□ 0.52
PTN-202ENST00000393083 CAMTA1Q9Y6Y1 1673 aa18.33■□□□□ 0.52
PTN-202ENST00000393083 NRAPQ86VF7 1730 aa18.32■□□□□ 0.52
PTN-202ENST00000393083 FBLN1P23142 703 aa18.32■□□□□ 0.52
PTN-202ENST00000393083 COL18A1P39060 1754 aa18.32■□□□□ 0.52
PTN-202ENST00000393083 AXIN2Q9Y2T1 843 aa18.31■□□□□ 0.52
PTN-202ENST00000393083 ZBTB7CA1YPR0 619 aa18.3■□□□□ 0.52
PTN-202ENST00000393083 VPS72Q15906 364 aa18.3■□□□□ 0.52
PTN-202ENST00000393083 ILDR2Q71H61 639 aa18.3■□□□□ 0.52
PTN-202ENST00000393083 NSD2O96028 1365 aa18.29■□□□□ 0.52
PTN-202ENST00000393083 RBM6P78332 1123 aaKnown RBP18.29■□□□□ 0.52
PTN-202ENST00000393083 RXRBP28702 533 aa18.28■□□□□ 0.52
PTN-202ENST00000393083 GJD4Q96KN9 370 aaPredicted RBP18.28■□□□□ 0.52
PTN-202ENST00000393083 COL5A2P05997 1499 aaPredicted RBP18.28■□□□□ 0.52
PTN-202ENST00000393083 MAP3K19Q56UN5 1328 aa18.27■□□□□ 0.52
PTN-202ENST00000393083 ABCC6O95255 1503 aa18.27■□□□□ 0.52
PTN-202ENST00000393083 STRN4Q9NRL3 753 aa18.26■□□□□ 0.51
PTN-202ENST00000393083 LTN1O94822 1766 aa18.26■□□□□ 0.51
PTN-202ENST00000393083 RRS1Q15050 365 aaKnown RBP18.25■□□□□ 0.51
PTN-202ENST00000393083 GLI3P10071 1580 aa18.25■□□□□ 0.51
PTN-202ENST00000393083 EVA1CP58658 441 aa18.25■□□□□ 0.51
PTN-202ENST00000393083 LARP1Q6PKG0 1096 aaKnown RBP18.25■□□□□ 0.51
PTN-202ENST00000393083 FAM9BQ8IZU0 186 aa18.25■□□□□ 0.51
PTN-202ENST00000393083 IP6K1Q92551 441 aa18.25■□□□□ 0.51
PTN-202ENST00000393083 SPATA31A5Q5VU36 1347 aa18.24■□□□□ 0.51
PTN-202ENST00000393083 SPATA31A7Q8IWB4 1347 aa18.24■□□□□ 0.51
PTN-202ENST00000393083 CCDC9Q9Y3X0 531 aaKnown RBP18.23■□□□□ 0.51
PTN-202ENST00000393083 CDK12Q9NYV4 1490 aaPredicted RBP18.23■□□□□ 0.51
PTN-202ENST00000393083 PPP2R1AP30153 589 aa18.22■□□□□ 0.51
PTN-202ENST00000393083 HOXC9P31274 260 aa18.22■□□□□ 0.51
PTN-202ENST00000393083 SPATA31A1Q5TZJ5 1347 aa18.22■□□□□ 0.51
PTN-202ENST00000393083 RGPD5Q99666 1765 aa18.22■□□□□ 0.51
PTN-202ENST00000393083 BLMP54132 1417 aaPredicted RBP18.22■□□□□ 0.51
PTN-202ENST00000393083 MORC1Q86VD1 984 aa18.21■□□□□ 0.51
PTN-202ENST00000393083 WDR17Q8IZU2 1322 aa18.21■□□□□ 0.51
PTN-202ENST00000393083 RTL1A6NKG5 1358 aa18.21■□□□□ 0.51
PTN-202ENST00000393083 ONECUT3O60422 494 aaPredicted RBP18.21■□□□□ 0.51
PTN-202ENST00000393083 TNNT2P45379 298 aaPredicted RBP18.21■□□□□ 0.51
PTN-202ENST00000393083 AMPHP49418 695 aa18.21■□□□□ 0.51
PTN-202ENST00000393083 POLKQ9UBT6 870 aa18.21■□□□□ 0.51
PTN-202ENST00000393083 EMILIN1Q9Y6C2 1016 aa18.21■□□□□ 0.51
PTN-202ENST00000393083 KIF24Q5T7B8 1368 aa18.2■□□□□ 0.5
PTN-202ENST00000393083 RGS12O14924 1447 aa18.2■□□□□ 0.5
PTN-202ENST00000393083 ERBB3P21860 1342 aa18.2■□□□□ 0.5
PTN-202ENST00000393083 PEAK1Q9H792 1746 aa18.2■□□□□ 0.5
PTN-202ENST00000393083 CRB1P82279 1406 aa18.19■□□□□ 0.5
PTN-202ENST00000393083 ANKRD24Q8TF21 1146 aa18.19■□□□□ 0.5
PTN-202ENST00000393083 PNISRQ8TF01 805 aaKnown RBP18.18■□□□□ 0.5
PTN-202ENST00000393083 HSP90AB2PQ58FF8 381 aa18.17■□□□□ 0.5
PTN-202ENST00000393083 TOM1L2Q6ZVM7 507 aa18.17■□□□□ 0.5
PTN-202ENST00000393083 FLT4P35916 1363 aa18.17■□□□□ 0.5
PTN-202ENST00000393083 INSRP06213 1382 aa18.17■□□□□ 0.5
PTN-202ENST00000393083 CSB-PGBD3P0DP91 1061 aa18.17■□□□□ 0.5
PTN-202ENST00000393083 HNRNPUQ00839 825 aaKnown RBP eCLIP18.17■□□□□ 0.5
PTN-202ENST00000393083 FAM98CQ17RN3 349 aaKnown RBP18.17■□□□□ 0.5
PTN-202ENST00000393083 TCP11L2Q8N4U5 519 aa18.17■□□□□ 0.5
PTN-202ENST00000393083 CARD10Q9BWT7 1032 aa18.17■□□□□ 0.5
PTN-202ENST00000393083 USP35Q9P2H5 1018 aa18.17■□□□□ 0.5
PTN-202ENST00000393083 MAP2P11137 1827 aaKnown RBP18.16■□□□□ 0.5
PTN-202ENST00000393083 SMG6Q86US8 1419 aaKnown RBP18.16■□□□□ 0.5
PTN-202ENST00000393083 BARGINQ6ZT62 677 aa18.16■□□□□ 0.5
PTN-202ENST00000393083 THRAP3Q9Y2W1 955 aaKnown RBP18.16■□□□□ 0.5
PTN-202ENST00000393083 PPM1GO15355 546 aaPredicted RBP18.14■□□□□ 0.49
PTN-202ENST00000393083 SEPT12Q8IYM1 358 aa18.14■□□□□ 0.49
PTN-202ENST00000393083 LTV1Q96GA3 475 aaPredicted RBP18.14■□□□□ 0.49
PTN-202ENST00000393083 THSD7AQ9UPZ6 1657 aa18.13■□□□□ 0.49
PTN-202ENST00000393083 NLRP2Q9NX02 1062 aa18.13■□□□□ 0.49
PTN-202ENST00000393083 DISP2A7MBM2 1401 aa18.09■□□□□ 0.49
PTN-202ENST00000393083 MTHFSP49914 203 aa18.09■□□□□ 0.49
PTN-202ENST00000393083 NBPF6Q5VWK0 638 aa18.09■□□□□ 0.49
PTN-202ENST00000393083 NBPF4Q96M43 638 aa18.09■□□□□ 0.49
PTN-202ENST00000393083 FAM208AQ9UK61 1670 aaKnown RBP18.09■□□□□ 0.49
PTN-202ENST00000393083 A0A0G2JS52 829 aa18.08■□□□□ 0.48
PTN-202ENST00000393083 MYT1Q01538 1121 aa18.08■□□□□ 0.48
PTN-202ENST00000393083 EIF4A2Q14240 407 aaKnown RBP18.08■□□□□ 0.48
PTN-202ENST00000393083 BRWD3Q6RI45 1802 aa18.07■□□□□ 0.48
PTN-202ENST00000393083 WDR43Q15061 677 aaKnown RBP eCLIP18.07■□□□□ 0.48
PTN-202ENST00000393083 CDCA7Q9BWT1 371 aaPredicted RBP18.07■□□□□ 0.48
PTN-202ENST00000393083 RGPD2P0DJD1 1756 aa18.07■□□□□ 0.48
PTN-202ENST00000393083 KRT27Q7Z3Y8 459 aa18.06■□□□□ 0.48
PTN-202ENST00000393083 ZBED9Q6R2W3 1325 aa18.06■□□□□ 0.48
PTN-202ENST00000393083 WNK3Q9BYP7 1800 aa18.05■□□□□ 0.48
PTN-202ENST00000393083 NCAPD2Q15021 1401 aa18.05■□□□□ 0.48
PTN-202ENST00000393083 PARP4Q9UKK3 1724 aaKnown RBP18.05■□□□□ 0.48
PTN-202ENST00000393083 USHBP1Q8N6Y0 703 aa18.04■□□□□ 0.48
PTN-202ENST00000393083 EYA1Q99502 592 aa18.04■□□□□ 0.48
PTN-202ENST00000393083 IL2RBP14784 551 aa18.04■□□□□ 0.48
PTN-202ENST00000393083 SOCS7O14512 581 aa18.03■□□□□ 0.48
PTN-202ENST00000393083 IL13P35225 146 aa18.03■□□□□ 0.48
PTN-202ENST00000393083 CFAP53Q96M91 514 aa18.03■□□□□ 0.48
PTN-202ENST00000393083 DDB1Q16531 1140 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms