RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 PDE3BQ13370 1112 aa15.39■□□□□ 0.05
TRAF3IP2-208ENST00000392556 TTC21AQ8NDW8 1320 aa15.39■□□□□ 0.05
TRAF3IP2-208ENST00000392556 KCNH5Q8NCM2 988 aa15.39■□□□□ 0.05
TRAF3IP2-208ENST00000392556 LRP5O75197 1615 aa15.39■□□□□ 0.05
TRAF3IP2-208ENST00000392556 NLRP6P59044 892 aa15.38■□□□□ 0.05
TRAF3IP2-208ENST00000392556 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.38■□□□□ 0.05
TRAF3IP2-208ENST00000392556 COL5A2P05997 1499 aaPredicted RBP15.37■□□□□ 0.05
TRAF3IP2-208ENST00000392556 CRB1P82279 1406 aa15.37■□□□□ 0.05
TRAF3IP2-208ENST00000392556 LARP1Q6PKG0 1096 aaKnown RBP15.36■□□□□ 0.05
TRAF3IP2-208ENST00000392556 CDCA7Q9BWT1 371 aaPredicted RBP15.36■□□□□ 0.05
TRAF3IP2-208ENST00000392556 SIN3AQ96ST3 1273 aa15.36■□□□□ 0.05
TRAF3IP2-208ENST00000392556 EN1Q05925 392 aaPredicted RBP15.35■□□□□ 0.05
TRAF3IP2-208ENST00000392556 TNS1Q9HBL0 1735 aaKnown RBP15.35■□□□□ 0.05
TRAF3IP2-208ENST00000392556 EP400Q96L91 3159 aa15.34■□□□□ 0.05
TRAF3IP2-208ENST00000392556 PUS7Q96PZ0 661 aaKnown RBP15.34■□□□□ 0.05
TRAF3IP2-208ENST00000392556 CAMKK2Q96RR4 588 aa15.34■□□□□ 0.05
TRAF3IP2-208ENST00000392556 ABCC6O95255 1503 aa15.34■□□□□ 0.05
TRAF3IP2-208ENST00000392556 TTC21BQ7Z4L5 1316 aa15.34■□□□□ 0.05
TRAF3IP2-208ENST00000392556 CPSF1Q10570 1443 aaKnown RBP15.34■□□□□ 0.05
TRAF3IP2-208ENST00000392556 USP35Q9P2H5 1018 aa15.34■□□□□ 0.05
TRAF3IP2-208ENST00000392556 PARP4Q9UKK3 1724 aaKnown RBP15.33■□□□□ 0.04
TRAF3IP2-208ENST00000392556 TRIM37O94972 964 aa15.32■□□□□ 0.04
TRAF3IP2-208ENST00000392556 RTL5Q5HYW3 569 aaPredicted RBP15.32■□□□□ 0.04
TRAF3IP2-208ENST00000392556 APBA3O96018 575 aa15.32■□□□□ 0.04
TRAF3IP2-208ENST00000392556 NBR1Q14596 966 aa15.32■□□□□ 0.04
TRAF3IP2-208ENST00000392556 FAM182BQ5T319 152 aa15.32■□□□□ 0.04
TRAF3IP2-208ENST00000392556 CCER2I3L3R5 266 aa15.31■□□□□ 0.04
TRAF3IP2-208ENST00000392556 ARHGEF25Q86VW2 580 aa15.31■□□□□ 0.04
TRAF3IP2-208ENST00000392556 OVOS2A0A0G2JMS6 1433 aa15.31■□□□□ 0.04
TRAF3IP2-208ENST00000392556 OVOS2A0A0J9YW53 1432 aa15.31■□□□□ 0.04
TRAF3IP2-208ENST00000392556 OVOS2Q6IE36 1432 aa15.31■□□□□ 0.04
TRAF3IP2-208ENST00000392556 PIK3C2AO00443 1686 aa15.31■□□□□ 0.04
TRAF3IP2-208ENST00000392556 WDR17Q8IZU2 1322 aa15.31■□□□□ 0.04
TRAF3IP2-208ENST00000392556 KTN1Q86UP2 1357 aaKnown RBP15.31■□□□□ 0.04
TRAF3IP2-208ENST00000392556 AKAP12Q02952 1782 aa15.31■□□□□ 0.04
TRAF3IP2-208ENST00000392556 EZH2Q15910 746 aaKnown RBP15.3■□□□□ 0.04
TRAF3IP2-208ENST00000392556 NBPF14Q5TI25 921 aa15.3■□□□□ 0.04
TRAF3IP2-208ENST00000392556 BCL9O00512 1426 aa15.3■□□□□ 0.04
TRAF3IP2-208ENST00000392556 USP31Q70CQ4 1352 aa15.3■□□□□ 0.04
TRAF3IP2-208ENST00000392556 TONSLQ96HA7 1378 aa15.3■□□□□ 0.04
TRAF3IP2-208ENST00000392556 TOM1L2Q6ZVM7 507 aa15.29■□□□□ 0.04
TRAF3IP2-208ENST00000392556 CARD11Q9BXL7 1154 aa15.29■□□□□ 0.04
TRAF3IP2-208ENST00000392556 WASHC2AQ641Q2 1341 aa15.29■□□□□ 0.04
TRAF3IP2-208ENST00000392556 DDB1Q16531 1140 aa15.28■□□□□ 0.04
TRAF3IP2-208ENST00000392556 COL18A1P39060 1754 aa15.28■□□□□ 0.04
TRAF3IP2-208ENST00000392556 CCDC7Q96M83 1385 aa15.28■□□□□ 0.04
TRAF3IP2-208ENST00000392556 PSDA5PKW4 1024 aaPredicted RBP15.28■□□□□ 0.04
TRAF3IP2-208ENST00000392556 CARD10Q9BWT7 1032 aa15.28■□□□□ 0.04
TRAF3IP2-208ENST00000392556 HDGFL2Q7Z4V5 671 aaPredicted RBP15.27■□□□□ 0.04
TRAF3IP2-208ENST00000392556 NINLQ9Y2I6 1382 aa15.27■□□□□ 0.03
TRAF3IP2-208ENST00000392556 ZBTB7CA1YPR0 619 aa15.26■□□□□ 0.03
TRAF3IP2-208ENST00000392556 R3HDM1Q15032 1099 aaKnown RBP15.26■□□□□ 0.03
TRAF3IP2-208ENST00000392556 USP54Q70EL1 1684 aa15.26■□□□□ 0.03
TRAF3IP2-208ENST00000392556 PLSCR1O15162 318 aa15.26■□□□□ 0.03
TRAF3IP2-208ENST00000392556 TERF2IPQ9NYB0 399 aa15.26■□□□□ 0.03
TRAF3IP2-208ENST00000392556 RREB1Q92766 1687 aa15.26■□□□□ 0.03
TRAF3IP2-208ENST00000392556 RTN4Q9NQC3 1192 aaKnown RBP15.25■□□□□ 0.03
TRAF3IP2-208ENST00000392556 NFAT5O94916 1531 aa15.25■□□□□ 0.03
TRAF3IP2-208ENST00000392556 MON2Q7Z3U7 1717 aa15.25■□□□□ 0.03
TRAF3IP2-208ENST00000392556 RGPD3A6NKT7 1758 aaPredicted RBP15.25■□□□□ 0.03
TRAF3IP2-208ENST00000392556 RGPD4Q7Z3J3 1758 aa15.25■□□□□ 0.03
TRAF3IP2-208ENST00000392556 EDC4Q6P2E9 1401 aaKnown RBP15.24■□□□□ 0.03
TRAF3IP2-208ENST00000392556 CSB-PGBD3P0DP91 1061 aa15.24■□□□□ 0.03
TRAF3IP2-208ENST00000392556 BCL11BQ9C0K0 894 aaPredicted RBP15.24■□□□□ 0.03
TRAF3IP2-208ENST00000392556 PEAK1Q9H792 1746 aa15.24■□□□□ 0.03
TRAF3IP2-208ENST00000392556 LRRC37A3O60309 1634 aa15.24■□□□□ 0.03
TRAF3IP2-208ENST00000392556 AXIN2Q9Y2T1 843 aa15.24■□□□□ 0.03
TRAF3IP2-208ENST00000392556 PPP4R2Q9NY27 417 aa15.23■□□□□ 0.03
TRAF3IP2-208ENST00000392556 WNK3Q9BYP7 1800 aa15.21■□□□□ 0.03
TRAF3IP2-208ENST00000392556 EXOC5O00471 708 aa15.21■□□□□ 0.03
TRAF3IP2-208ENST00000392556 CD163L1Q9NR16 1453 aa15.21■□□□□ 0.03
TRAF3IP2-208ENST00000392556 NUP188Q5SRE5 1749 aa15.21■□□□□ 0.03
TRAF3IP2-208ENST00000392556 TMC1Q8TDI8 760 aa15.2■□□□□ 0.02
TRAF3IP2-208ENST00000392556 RSPH6AQ9H0K4 717 aa15.19■□□□□ 0.02
TRAF3IP2-208ENST00000392556 ERBB3P21860 1342 aa15.19■□□□□ 0.02
TRAF3IP2-208ENST00000392556 TNS2Q63HR2 1409 aa15.18■□□□□ 0.02
TRAF3IP2-208ENST00000392556 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.18■□□□□ 0.02
TRAF3IP2-208ENST00000392556 MARCH10Q8NA82 808 aaPredicted RBP15.18■□□□□ 0.02
TRAF3IP2-208ENST00000392556 IPO9Q96P70 1041 aaKnown RBP15.18■□□□□ 0.02
TRAF3IP2-208ENST00000392556 GLIPR1L2Q4G1C9 344 aa15.18■□□□□ 0.02
TRAF3IP2-208ENST00000392556 SLC12A5Q9H2X9 1139 aa15.17■□□□□ 0.02
TRAF3IP2-208ENST00000392556 A0A1W2PP64 1363 aa15.17■□□□□ 0.02
TRAF3IP2-208ENST00000392556 SOX12O15370 315 aa15.17■□□□□ 0.02
TRAF3IP2-208ENST00000392556 NME9Q86XW9 330 aa15.17■□□□□ 0.02
TRAF3IP2-208ENST00000392556 SPON1Q9HCB6 807 aa15.17■□□□□ 0.02
TRAF3IP2-208ENST00000392556 PODXL2Q9NZ53 605 aa15.16■□□□□ 0.02
TRAF3IP2-208ENST00000392556 SBF2Q86WG5 1849 aa15.16■□□□□ 0.02
TRAF3IP2-208ENST00000392556 TESK2Q96S53 571 aa15.15■□□□□ 0.02
TRAF3IP2-208ENST00000392556 KCNQ2O43526 872 aa15.15■□□□□ 0.02
TRAF3IP2-208ENST00000392556 IL2RBP14784 551 aa15.15■□□□□ 0.02
TRAF3IP2-208ENST00000392556 NLRP2Q9NX02 1062 aa15.14■□□□□ 0.01
TRAF3IP2-208ENST00000392556 CDCA8Q53HL2 280 aa15.14■□□□□ 0.01
TRAF3IP2-208ENST00000392556 ANKRD24Q8TF21 1146 aa15.14■□□□□ 0.01
TRAF3IP2-208ENST00000392556 IP6K1Q92551 441 aa15.14■□□□□ 0.01
TRAF3IP2-208ENST00000392556 TIMELESSQ9UNS1 1208 aa15.14■□□□□ 0.01
TRAF3IP2-208ENST00000392556 RGPD5Q99666 1765 aa15.13■□□□□ 0.01
TRAF3IP2-208ENST00000392556 ST20-MTHFSA0A0A6YYL1 179 aa15.12■□□□□ 0.01
TRAF3IP2-208ENST00000392556 COG3Q96JB2 828 aa15.12■□□□□ 0.01
TRAF3IP2-208ENST00000392556 ZBTB47Q9UFB7 747 aaPredicted RBP15.12■□□□□ 0.01
TRAF3IP2-208ENST00000392556 FAM208AQ9UK61 1670 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms