RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 TRAF7Q6Q0C0 670 aa2.49□□□□□ -2.01
TRAJ39-201ENST00000390498 RGL4Q8IZJ4 473 aa2.49□□□□□ -2.01
TRAJ39-201ENST00000390498 ARMC2Q8NEN0 867 aa2.49□□□□□ -2.01
TRAJ39-201ENST00000390498 GPKOWQ92917 476 aaPredicted RBP eCLIP2.49□□□□□ -2.01
TRAJ39-201ENST00000390498 KCNH8Q96L42 1107 aa2.49□□□□□ -2.01
TRAJ39-201ENST00000390498 TUT1Q9H6E5 874 aaKnown RBP2.49□□□□□ -2.01
TRAJ39-201ENST00000390498 PPP1R1BQ9UD71 204 aaPredicted RBP2.49□□□□□ -2.01
TRAJ39-201ENST00000390498 RBM19Q9Y4C8 960 aaKnown RBP2.49□□□□□ -2.01
TRAJ39-201ENST00000390498 ZBTB7BO15156 539 aaPredicted RBP2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 PRMT3O60678 531 aa2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 PTCD1O75127 700 aaKnown RBP2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 DKK1O94907 266 aa2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 HOXB3P14651 431 aaPredicted RBP2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 SCNN1AP37088 669 aa2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 TAGLNQ01995 201 aaKnown RBP2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 FKBP4Q02790 459 aaKnown RBP eCLIP2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 EVX2Q03828 476 aa2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 KCNH2Q12809 1159 aa2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 ZNF211Q13398 564 aaPredicted RBP2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 MRPL58Q14197 206 aaKnown RBP2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 ECM1Q16610 540 aa2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 PTPRNQ16849 979 aa2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 FAM98CQ17RN3 349 aaKnown RBP2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 ANKRD13AQ8IZ07 590 aa2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 GTF3C2Q8WUA4 911 aaPredicted RBP2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 ZNF594Q96JF6 807 aaPredicted RBP2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 USB1Q9BQ65 265 aaKnown RBP2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 ZBED2Q9BTP6 218 aa2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 BACH2Q9BYV9 841 aa2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 RABGEF1Q9UJ41 708 aa2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 SLC27A5Q9Y2P5 690 aa2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 SALL2Q9Y467 1007 aaPredicted RBP2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 PCDHB9Q9Y5E1 797 aa2.48□□□□□ -2.01
TRAJ39-201ENST00000390498 TTBK1Q5TCY1 1321 aaPredicted RBP2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 ACTN4O43707 911 aaKnown RBP2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 GABBR2O75899 941 aa2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 GTF2IP78347 998 aa2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 ARHGAP4P98171 946 aa2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 NBPF14Q5TI25 921 aa2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 CCDC102BQ68D86 513 aa2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 NOP9Q86U38 636 aaKnown RBP2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 LAPTM4BQ86VI4 370 aa2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 SLC43A3Q8NBI5 491 aa2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 PIK3R5Q8WYR1 880 aa2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 COL26A1Q96A83 441 aa2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 PRIMPOLQ96LW4 560 aa2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 KCNK17Q96T54 332 aa2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 PRR14Q9BWN1 585 aa2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 SLC4A5Q9BY07 1137 aa2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 CHMP4AQ9BY43 222 aa2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 RBCK1Q9BYM8 510 aa2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 ANO2Q9NQ90 1003 aa2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 CUEDC1Q9NWM3 386 aaPredicted RBP2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 MAP10Q9P2G4 905 aa2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 DOLKQ9UPQ8 538 aa2.47□□□□□ -2.01
TRAJ39-201ENST00000390498 ANKRD62A6NC57 917 aa2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 SFI1A8K8P3 1242 aa2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 M0R2N6 131 aa2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 EIF5BO60841 1220 aaKnown RBP2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 FAM13AO94988 1023 aa2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 FMNL1O95466 1100 aaPredicted RBP2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 NPR3P17342 541 aa2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 JUNDP17535 347 aa2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 WEE1P30291 646 aa2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 CTHP32929 405 aa2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 HDLBPQ00341 1268 aaKnown RBP2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 RNF20Q5VTR2 975 aa2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 BRICD5Q6PL45 260 aa2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 DPH6Q7L8W6 267 aa2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 SAMD7Q7Z3H4 446 aa2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 ARMC5Q96C12 935 aa2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 CITED4Q96RK1 184 aa2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 HINFPQ9BQA5 517 aa2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 OCSTAMPQ9BR26 566 aa2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 TGIF2Q9GZN2 237 aa2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 METTL5Q9NRN9 209 aaKnown RBP2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 EVA1BQ9NVM1 165 aa2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 NLRP2Q9NX02 1062 aa2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 SEPT3Q9UH03 358 aa2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 SEPT9Q9UHD8 586 aaPredicted RBP2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 KIAA1024Q9UPX6 916 aa2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 DNMT3AQ9Y6K1 912 aaPredicted RBP2.46□□□□□ -2.02
TRAJ39-201ENST00000390498 TREHO43280 583 aa2.45□□□□□ -2.02
TRAJ39-201ENST00000390498 NDUFB5O43674 189 aa2.45□□□□□ -2.02
TRAJ39-201ENST00000390498 PRPF40AO75400 957 aaKnown RBP2.45□□□□□ -2.02
TRAJ39-201ENST00000390498 P4HBP07237 508 aaKnown RBP2.45□□□□□ -2.02
TRAJ39-201ENST00000390498 CCNYL3P0C7X3 344 aa2.45□□□□□ -2.02
TRAJ39-201ENST00000390498 XPCQ01831 940 aaPredicted RBP2.45□□□□□ -2.02
TRAJ39-201ENST00000390498 FMR1Q06787 632 aaKnown RBP eCLIP2.45□□□□□ -2.02
TRAJ39-201ENST00000390498 RAD51AP2Q09MP3 1159 aa2.45□□□□□ -2.02
TRAJ39-201ENST00000390498 USP4Q13107 963 aa2.45□□□□□ -2.02
TRAJ39-201ENST00000390498 PUS10Q3MIT2 529 aaKnown RBP2.45□□□□□ -2.02
TRAJ39-201ENST00000390498 TSGA10IPQ3SY00 556 aa2.45□□□□□ -2.02
TRAJ39-201ENST00000390498 OXLD1Q5BKU9 147 aa2.45□□□□□ -2.02
TRAJ39-201ENST00000390498 LDLRAD1Q5T700 205 aa2.45□□□□□ -2.02
TRAJ39-201ENST00000390498 GIMAP6Q6P9H5 292 aa2.45□□□□□ -2.02
TRAJ39-201ENST00000390498 BLOC1S3Q6QNY0 202 aa2.45□□□□□ -2.02
TRAJ39-201ENST00000390498 RNF19BQ6ZMZ0 732 aa2.45□□□□□ -2.02
TRAJ39-201ENST00000390498 TMC7Q7Z402 723 aa2.45□□□□□ -2.02
TRAJ39-201ENST00000390498 ZBTB33Q86T24 672 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms