RNA–Protein interactions for RNA: ENST00000375780.6

CLIC1-207, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-207ENST00000375780 EVA1CP58658 441 aa16.46■□□□□ 0.23
CLIC1-207ENST00000375780 STRN4Q9NRL3 753 aa16.46■□□□□ 0.23
CLIC1-207ENST00000375780 SPATA31A5Q5VU36 1347 aa16.45■□□□□ 0.22
CLIC1-207ENST00000375780 SPATA31A7Q8IWB4 1347 aa16.45■□□□□ 0.22
CLIC1-207ENST00000375780 GGNBP2Q9H3C7 697 aa16.45■□□□□ 0.22
CLIC1-207ENST00000375780 PANK3Q9H999 370 aa16.45■□□□□ 0.22
CLIC1-207ENST00000375780 CCDC7Q96M83 1385 aa16.45■□□□□ 0.22
CLIC1-207ENST00000375780 BRWD3Q6RI45 1802 aa16.42■□□□□ 0.22
CLIC1-207ENST00000375780 SPATA31A1Q5TZJ5 1347 aa16.42■□□□□ 0.22
CLIC1-207ENST00000375780 CRB1P82279 1406 aa16.42■□□□□ 0.22
CLIC1-207ENST00000375780 ONECUT3O60422 494 aaPredicted RBP16.42■□□□□ 0.22
CLIC1-207ENST00000375780 NSD2O96028 1365 aa16.42■□□□□ 0.22
CLIC1-207ENST00000375780 WASHC2AQ641Q2 1341 aa16.41■□□□□ 0.22
CLIC1-207ENST00000375780 BLMP54132 1417 aaPredicted RBP16.41■□□□□ 0.22
CLIC1-207ENST00000375780 FAM208AQ9UK61 1670 aaKnown RBP16.41■□□□□ 0.22
CLIC1-207ENST00000375780 THSD7AQ9UPZ6 1657 aa16.41■□□□□ 0.22
CLIC1-207ENST00000375780 LARP1Q6PKG0 1096 aaKnown RBP16.41■□□□□ 0.22
CLIC1-207ENST00000375780 AXIN2Q9Y2T1 843 aa16.41■□□□□ 0.22
CLIC1-207ENST00000375780 WDR17Q8IZU2 1322 aa16.41■□□□□ 0.22
CLIC1-207ENST00000375780 RTL1A6NKG5 1358 aa16.4■□□□□ 0.22
CLIC1-207ENST00000375780 MAP2P11137 1827 aaKnown RBP16.4■□□□□ 0.22
CLIC1-207ENST00000375780 KNSTRNQ9Y448 316 aa16.39■□□□□ 0.21
CLIC1-207ENST00000375780 WNK3Q9BYP7 1800 aa16.39■□□□□ 0.21
CLIC1-207ENST00000375780 MAP3K19Q56UN5 1328 aa16.39■□□□□ 0.21
CLIC1-207ENST00000375780 KIF24Q5T7B8 1368 aa16.39■□□□□ 0.21
CLIC1-207ENST00000375780 FAM98CQ17RN3 349 aaKnown RBP16.38■□□□□ 0.21
CLIC1-207ENST00000375780 SEPT12Q8IYM1 358 aa16.38■□□□□ 0.21
CLIC1-207ENST00000375780 IP6K1Q92551 441 aa16.38■□□□□ 0.21
CLIC1-207ENST00000375780 THRAP3Q9Y2W1 955 aaKnown RBP16.38■□□□□ 0.21
CLIC1-207ENST00000375780 A0A0G2JS52 829 aa16.38■□□□□ 0.21
CLIC1-207ENST00000375780 MYT1Q01538 1121 aa16.38■□□□□ 0.21
CLIC1-207ENST00000375780 BARGINQ6ZT62 677 aa16.38■□□□□ 0.21
CLIC1-207ENST00000375780 TOM1L2Q6ZVM7 507 aa16.38■□□□□ 0.21
CLIC1-207ENST00000375780 TCP11L2Q8N4U5 519 aa16.38■□□□□ 0.21
CLIC1-207ENST00000375780 ERBB3P21860 1342 aa16.37■□□□□ 0.21
CLIC1-207ENST00000375780 CSB-PGBD3P0DP91 1061 aa16.37■□□□□ 0.21
CLIC1-207ENST00000375780 AMPHP49418 695 aa16.37■□□□□ 0.21
CLIC1-207ENST00000375780 USP35Q9P2H5 1018 aa16.37■□□□□ 0.21
CLIC1-207ENST00000375780 PARP4Q9UKK3 1724 aaKnown RBP16.36■□□□□ 0.21
CLIC1-207ENST00000375780 HOXC9P31274 260 aa16.35■□□□□ 0.21
CLIC1-207ENST00000375780 RRS1Q15050 365 aaKnown RBP16.35■□□□□ 0.21
CLIC1-207ENST00000375780 FLT4P35916 1363 aa16.35■□□□□ 0.21
CLIC1-207ENST00000375780 PEAK1Q9H792 1746 aa16.35■□□□□ 0.21
CLIC1-207ENST00000375780 ZNF316A6NFI3 1004 aaPredicted RBP16.34■□□□□ 0.21
CLIC1-207ENST00000375780 CARD10Q9BWT7 1032 aa16.34■□□□□ 0.21
CLIC1-207ENST00000375780 FBLN1P23142 703 aa16.34■□□□□ 0.21
CLIC1-207ENST00000375780 ANKRD24Q8TF21 1146 aa16.34■□□□□ 0.21
CLIC1-207ENST00000375780 AMER1Q5JTC6 1135 aaPredicted RBP16.33■□□□□ 0.2
CLIC1-207ENST00000375780 KRT27Q7Z3Y8 459 aa16.33■□□□□ 0.2
CLIC1-207ENST00000375780 SMG6Q86US8 1419 aaKnown RBP16.33■□□□□ 0.2
CLIC1-207ENST00000375780 PER1O15534 1290 aaPredicted RBP16.32■□□□□ 0.2
CLIC1-207ENST00000375780 CDCA7Q9BWT1 371 aaPredicted RBP16.32■□□□□ 0.2
CLIC1-207ENST00000375780 EP400Q96L91 3159 aa16.32■□□□□ 0.2
CLIC1-207ENST00000375780 MORC1Q86VD1 984 aa16.31■□□□□ 0.2
CLIC1-207ENST00000375780 NLRP2Q9NX02 1062 aa16.31■□□□□ 0.2
CLIC1-207ENST00000375780 INSRP06213 1382 aa16.31■□□□□ 0.2
CLIC1-207ENST00000375780 NPC1L1Q9UHC9 1359 aa16.31■□□□□ 0.2
CLIC1-207ENST00000375780 LRRC37A3O60309 1634 aa16.31■□□□□ 0.2
CLIC1-207ENST00000375780 RGPD2P0DJD1 1756 aa16.31■□□□□ 0.2
CLIC1-207ENST00000375780 EMILIN1Q9Y6C2 1016 aa16.3■□□□□ 0.2
CLIC1-207ENST00000375780 DISP2A7MBM2 1401 aa16.29■□□□□ 0.2
CLIC1-207ENST00000375780 UPF1Q92900 1129 aaKnown RBP eCLIP16.29■□□□□ 0.21e-12■□□□□ 10.4
CLIC1-207ENST00000375780 LTV1Q96GA3 475 aaPredicted RBP16.29■□□□□ 0.2
CLIC1-207ENST00000375780 TNNT2P45379 298 aaPredicted RBP16.28■□□□□ 0.2
CLIC1-207ENST00000375780 POLKQ9UBT6 870 aa16.28■□□□□ 0.2
CLIC1-207ENST00000375780 PPM1GO15355 546 aaPredicted RBP16.27■□□□□ 0.2
CLIC1-207ENST00000375780 PDE3BQ13370 1112 aa16.27■□□□□ 0.2
CLIC1-207ENST00000375780 HSP90AB2PQ58FF8 381 aa16.27■□□□□ 0.2
CLIC1-207ENST00000375780 DDB1Q16531 1140 aa16.26■□□□□ 0.19
CLIC1-207ENST00000375780 IL2RBP14784 551 aa16.25■□□□□ 0.19
CLIC1-207ENST00000375780 CCDC125Q86Z20 511 aa16.25■□□□□ 0.19
CLIC1-207ENST00000375780 TNS2Q63HR2 1409 aa16.25■□□□□ 0.19
CLIC1-207ENST00000375780 RGPD1P0DJD0 1748 aa16.25■□□□□ 0.19
CLIC1-207ENST00000375780 CC2D1BQ5T0F9 858 aaKnown RBP16.24■□□□□ 0.19
CLIC1-207ENST00000375780 OVOS2A0A0G2JMS6 1433 aa16.22■□□□□ 0.19
CLIC1-207ENST00000375780 FAM196AQ6ZSG2 479 aa16.22■□□□□ 0.19
CLIC1-207ENST00000375780 EXOC5O00471 708 aa16.21■□□□□ 0.19
CLIC1-207ENST00000375780 NBPF6Q5VWK0 638 aa16.21■□□□□ 0.19
CLIC1-207ENST00000375780 NBPF4Q96M43 638 aa16.21■□□□□ 0.19
CLIC1-207ENST00000375780 SBF2Q86WG5 1849 aa16.21■□□□□ 0.19
CLIC1-207ENST00000375780 NCAPD2Q15021 1401 aa16.2■□□□□ 0.18
CLIC1-207ENST00000375780 TNS1Q9HBL0 1735 aaKnown RBP16.2■□□□□ 0.18
CLIC1-207ENST00000375780 SF3B2Q13435 895 aaKnown RBP16.19■□□□□ 0.18
CLIC1-207ENST00000375780 FAM182BQ5T319 152 aa16.19■□□□□ 0.18
CLIC1-207ENST00000375780 BCL9O00512 1426 aa16.19■□□□□ 0.18
CLIC1-207ENST00000375780 MEGF6O75095 1541 aa16.18■□□□□ 0.18
CLIC1-207ENST00000375780 EIF4A2Q14240 407 aaKnown RBP16.18■□□□□ 0.18
CLIC1-207ENST00000375780 RAPGEF4Q8WZA2 1011 aa16.18■□□□□ 0.18
CLIC1-207ENST00000375780 SHANK3Q9BYB0 1731 aa16.18■□□□□ 0.18
CLIC1-207ENST00000375780 DIEXFQ68CQ4 756 aaKnown RBP16.17■□□□□ 0.18
CLIC1-207ENST00000375780 USHBP1Q8N6Y0 703 aa16.17■□□□□ 0.18
CLIC1-207ENST00000375780 KAT6BQ8WYB5 2073 aa16.17■□□□□ 0.18
CLIC1-207ENST00000375780 MTHFSP49914 203 aa16.17■□□□□ 0.18
CLIC1-207ENST00000375780 PLEKHG2Q9H7P9 1386 aa16.16■□□□□ 0.18
CLIC1-207ENST00000375780 PKD1L3Q7Z443 1732 aa16.16■□□□□ 0.18
CLIC1-207ENST00000375780 TATP17735 454 aaPredicted RBP16.16■□□□□ 0.18
CLIC1-207ENST00000375780 CNGB1Q14028 1251 aaPredicted RBP16.16■□□□□ 0.18
CLIC1-207ENST00000375780 MARCH10Q8NA82 808 aaPredicted RBP16.16■□□□□ 0.18
CLIC1-207ENST00000375780 EYA1Q99502 592 aa16.16■□□□□ 0.18
CLIC1-207ENST00000375780 IGSF1Q8N6C5 1336 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms